BLASTX nr result

ID: Coptis24_contig00005789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005789
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273741.2| PREDICTED: uncharacterized protein LOC100266...   181   1e-43
ref|XP_002522573.1| copper ion binding protein, putative [Ricinu...   180   2e-43
ref|XP_002317426.1| predicted protein [Populus trichocarpa] gi|2...   176   3e-42
emb|CBI30680.3| unnamed protein product [Vitis vinifera]              175   6e-42
emb|CAN71579.1| hypothetical protein VITISV_003229 [Vitis vinifera]   173   2e-41

>ref|XP_002273741.2| PREDICTED: uncharacterized protein LOC100266966 [Vitis vinifera]
          Length = 150

 Score =  181 bits (459), Expect = 1e-43
 Identities = 91/153 (59%), Positives = 113/153 (73%), Gaps = 6/153 (3%)
 Frame = -3

Query: 552 MSITEMRVHMCCPGCESKIKKAILKLDGIDNIEIDMNMQKVTVIGWAEQKKVLKVVRKTG 373
           M+I EMRVHM C GCESKI+KA+ KLDGID+I++DM MQKVTV+GWA+QKKVLK VRKTG
Sbjct: 1   MTIVEMRVHMDCAGCESKIRKALQKLDGIDDIDVDMAMQKVTVMGWADQKKVLKAVRKTG 60

Query: 372 RRAELWPFPYTPE------NAYTEHYYHQHQRSQPYANFGXXXXXXXXXXXYKHGYDGNA 211
           R+AELWPFPY PE        Y  +Y+H H+R  P+A              YKHGY+G+ 
Sbjct: 61  RKAELWPFPYNPEYYNYTDQFYQNYYHHHHRRRFPFAY--SDSRPSSSYNYYKHGYNGHD 118

Query: 210 HGYYNRPPAYSTIINDGAGAMFSDDNPHACSIM 112
           HGYY++ P +ST+I+  A AMFSD+NP+ACSIM
Sbjct: 119 HGYYHQ-PIHSTVIDARAEAMFSDENPNACSIM 150


>ref|XP_002522573.1| copper ion binding protein, putative [Ricinus communis]
           gi|223538264|gb|EEF39873.1| copper ion binding protein,
           putative [Ricinus communis]
          Length = 146

 Score =  180 bits (457), Expect = 2e-43
 Identities = 87/147 (59%), Positives = 105/147 (71%), Gaps = 2/147 (1%)
 Frame = -3

Query: 546 ITEMRVHMCCPGCESKIKKAILKLDGIDNIEIDMNMQKVTVIGWAEQKKVLKVVRKTGRR 367
           +TEMRVHM C GCE+KIKKA+ KLDG+D+I+IDM MQKVTV+GWA+QKKVLK VRKTGRR
Sbjct: 1   MTEMRVHMDCAGCETKIKKALQKLDGVDDIDIDMTMQKVTVMGWADQKKVLKAVRKTGRR 60

Query: 366 AELWPFPYTPE--NAYTEHYYHQHQRSQPYANFGXXXXXXXXXXXYKHGYDGNAHGYYNR 193
           AELWP+PY PE  N   ++ Y Q Q +QP   +             KHGY    +GYY  
Sbjct: 61  AELWPYPYNPEYYNFKQQYQYQQQQETQPEVTYYATQYSTSSYNYRKHGYSNEDYGYYQT 120

Query: 192 PPAYSTIINDGAGAMFSDDNPHACSIM 112
           PP YS  +++ A AMFSD+NPHACSIM
Sbjct: 121 PP-YSMAVDEQATAMFSDENPHACSIM 146


>ref|XP_002317426.1| predicted protein [Populus trichocarpa] gi|222860491|gb|EEE98038.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score =  176 bits (447), Expect = 3e-42
 Identities = 86/148 (58%), Positives = 108/148 (72%), Gaps = 1/148 (0%)
 Frame = -3

Query: 552 MSITEMRVHMCCPGCESKIKKAILKLDGIDNIEIDMNMQKVTVIGWAEQKKVLKVVRKTG 373
           M+ITEMRVHM C GCE+KI+KAI KLDG+D+I+IDM MQKVTV+GWA+Q+KVLK VRKTG
Sbjct: 1   MTITEMRVHMDCAGCETKIRKAIRKLDGVDDIDIDMAMQKVTVMGWADQRKVLKAVRKTG 60

Query: 372 RRAELWPFPYTPEN-AYTEHYYHQHQRSQPYANFGXXXXXXXXXXXYKHGYDGNAHGYYN 196
           RRAELWP+PY PE+  + + YY+Q Q  +                 +KHGY+    G Y 
Sbjct: 61  RRAELWPYPYNPESYNFNQQYYYQKQHHETKVVNHYTKMPTSSYNYHKHGYNDEEFGRYQ 120

Query: 195 RPPAYSTIINDGAGAMFSDDNPHACSIM 112
           +PP Y+TI ++ A AMFSD+NPHACSIM
Sbjct: 121 KPP-YATIFDEEASAMFSDENPHACSIM 147


>emb|CBI30680.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  175 bits (444), Expect = 6e-42
 Identities = 88/148 (59%), Positives = 109/148 (73%), Gaps = 6/148 (4%)
 Frame = -3

Query: 537 MRVHMCCPGCESKIKKAILKLDGIDNIEIDMNMQKVTVIGWAEQKKVLKVVRKTGRRAEL 358
           MRVHM C GCESKI+KA+ KLDGID+I++DM MQKVTV+GWA+QKKVLK VRKTGR+AEL
Sbjct: 1   MRVHMDCAGCESKIRKALQKLDGIDDIDVDMAMQKVTVMGWADQKKVLKAVRKTGRKAEL 60

Query: 357 WPFPYTPE------NAYTEHYYHQHQRSQPYANFGXXXXXXXXXXXYKHGYDGNAHGYYN 196
           WPFPY PE        Y  +Y+H H+R  P+A              YKHGY+G+ HGYY+
Sbjct: 61  WPFPYNPEYYNYTDQFYQNYYHHHHRRRFPFAY--SDSRPSSSYNYYKHGYNGHDHGYYH 118

Query: 195 RPPAYSTIINDGAGAMFSDDNPHACSIM 112
           + P +ST+I+  A AMFSD+NP+ACSIM
Sbjct: 119 Q-PIHSTVIDARAEAMFSDENPNACSIM 145


>emb|CAN71579.1| hypothetical protein VITISV_003229 [Vitis vinifera]
          Length = 174

 Score =  173 bits (439), Expect = 2e-41
 Identities = 90/157 (57%), Positives = 114/157 (72%), Gaps = 9/157 (5%)
 Frame = -3

Query: 555 NMSITEMRVHMCCPGCESKIKKAILKLDGIDNIEIDMNMQKVTVIGWAEQKKVLKVVRKT 376
           +++I EMRVHM C GCESKI+KA+ KLDGID+I++DM MQKVTV+GWA+QKKVLK VRKT
Sbjct: 21  SINIVEMRVHMDCAGCESKIRKALQKLDGIDDIDVDMAMQKVTVMGWADQKKVLKAVRKT 80

Query: 375 GRRAELWPFPYTPE-NAYTEHYYH--------QHQRSQPYANFGXXXXXXXXXXXYKHGY 223
           GR+AELWPFPY PE   YT+ +Y          H+R  P+A              YKHGY
Sbjct: 81  GRKAELWPFPYNPEYYNYTDQFYQNXYHHDHDHHRRRFPFAY--SDSRPSSSYNYYKHGY 138

Query: 222 DGNAHGYYNRPPAYSTIINDGAGAMFSDDNPHACSIM 112
           +G+ HGYY++ P +ST+I+  A AMFSD+NP+ACSIM
Sbjct: 139 NGHDHGYYHQ-PIHSTVIDARAEAMFSDENPNACSIM 174


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