BLASTX nr result

ID: Coptis24_contig00005771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005771
         (1034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631985.1| PREDICTED: uncharacterized protein LOC100854...   180   4e-43
emb|CAN75753.1| hypothetical protein VITISV_038412 [Vitis vinifera]   180   4e-43
ref|XP_002519292.1| yth domain-containing protein, putative [Ric...   169   8e-40
ref|XP_003550796.1| PREDICTED: uncharacterized protein LOC100818...   162   1e-37
ref|XP_003609844.1| YTH domain family protein [Medicago truncatu...   161   3e-37

>ref|XP_003631985.1| PREDICTED: uncharacterized protein LOC100854837 [Vitis vinifera]
          Length = 714

 Score =  180 bits (457), Expect = 4e-43
 Identities = 105/210 (50%), Positives = 136/210 (64%), Gaps = 8/210 (3%)
 Frame = -1

Query: 1034 SRDTQEIKYRQGMEMLKIFKNYTFKTSILDDFMYYEQRQKVMQEEKARLHGKSYDSSFYT 855
            SRDTQEI+++QG+EMLKIFKN+T KTS+LDDFMYYE RQ++MQ+EK RL  KSY+S F+ 
Sbjct: 498  SRDTQEIRFKQGLEMLKIFKNHTTKTSLLDDFMYYENRQRIMQDEKTRLLIKSYESPFFV 557

Query: 854  PAFVPLKKANGVTDRPPSADETANRHNQLTSSGRKAAST-TEQVALNVDVINSSGSEEGN 678
            P   P +K N V D PPS ++   + +  +     A ST T+QV+L  D IN S     N
Sbjct: 558  PPLDPPRKLNFVIDLPPSEEKMTKQTDVRSLEKPVATSTATDQVSLKSDDINRSSM---N 614

Query: 677  AKKNPVEDANDVTSILKIGSLSIDSKNVE-------AQPTATVTIASTNTVDVFTVGSMP 519
             K +  E  +D  S LKIGSL+I+ K VE       A PT   T+  T +VDV TVGSMP
Sbjct: 615  EKCSTAETKDDTVSTLKIGSLTINPKQVESIPTMAAAPPTPAGTVVGTESVDVVTVGSMP 674

Query: 518  VKVNGFSEASSATLTVGSIPIVTKGLTVDK 429
            VKVNGF+E S    T G+IP+  + L ++K
Sbjct: 675  VKVNGFAE-SPGLFTFGTIPLDPRTLQLEK 703


>emb|CAN75753.1| hypothetical protein VITISV_038412 [Vitis vinifera]
          Length = 1960

 Score =  180 bits (457), Expect = 4e-43
 Identities = 105/210 (50%), Positives = 136/210 (64%), Gaps = 8/210 (3%)
 Frame = -1

Query: 1034 SRDTQEIKYRQGMEMLKIFKNYTFKTSILDDFMYYEQRQKVMQEEKARLHGKSYDSSFYT 855
            SRDTQEI+++QG+EMLKIFKN+T KTS+LDDFMYYE RQ++MQ+EK RL  KSY+S F+ 
Sbjct: 508  SRDTQEIRFKQGLEMLKIFKNHTTKTSLLDDFMYYENRQRIMQDEKTRLLIKSYESPFFV 567

Query: 854  PAFVPLKKANGVTDRPPSADETANRHNQLTSSGRKAAST-TEQVALNVDVINSSGSEEGN 678
            P   P +K N V D PPS ++   + +  +     A ST T+QV+L  D IN S     N
Sbjct: 568  PPLDPPRKLNFVIDLPPSEEKMTKQTDVRSLEKPVATSTATDQVSLKSDDINRSSM---N 624

Query: 677  AKKNPVEDANDVTSILKIGSLSIDSKNVE-------AQPTATVTIASTNTVDVFTVGSMP 519
             K +  E  +D  S LKIGSL+I+ K VE       A PT   T+  T +VDV TVGSMP
Sbjct: 625  EKCSTAETKDDTVSTLKIGSLTINPKQVESIPTMAAAPPTPAGTVVGTESVDVVTVGSMP 684

Query: 518  VKVNGFSEASSATLTVGSIPIVTKGLTVDK 429
            VKVNGF+E S    T G+IP+  + L ++K
Sbjct: 685  VKVNGFAE-SPGLFTFGTIPLDPRTLQLEK 713


>ref|XP_002519292.1| yth domain-containing protein, putative [Ricinus communis]
            gi|223541607|gb|EEF43156.1| yth domain-containing
            protein, putative [Ricinus communis]
          Length = 706

 Score =  169 bits (429), Expect = 8e-40
 Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 1/203 (0%)
 Frame = -1

Query: 1034 SRDTQEIKYRQGMEMLKIFKNYTFKTSILDDFMYYEQRQKVMQEEKARLHGKSYDSSFYT 855
            SRDTQEI Y+QG+EMLKIFKN+  KTS+LDDFMYYE RQ++MQEEKAR   K  ++ F  
Sbjct: 499  SRDTQEILYKQGLEMLKIFKNHVSKTSLLDDFMYYENRQRIMQEEKARFAFKRLETPFLV 558

Query: 854  PAFVPLKKANGVTDRPPSADETANRHNQLTSSGRKAASTTEQVALNVDVINSSGSEEGNA 675
            P   P  K N V + PPS  E     N   S     AS  EQ + N DV N+   E GN+
Sbjct: 559  PVLDPAHKLNSVIELPPSKTENTIEQNGSNSMKNTEASAIEQGSSNSDVSNTI-VERGNS 617

Query: 674  KKNPVEDANDVTSILKIGSLSIDSKNVEAQP-TATVTIASTNTVDVFTVGSMPVKVNGFS 498
            +   V   +D+ S LKIG LSI+ K  E +P +AT ++A+ ++ D+ TVGS+P++VNGF+
Sbjct: 618  E--IVNAGDDIESGLKIGLLSINPKQAEHKPSSATSSVATVDSADIVTVGSVPIQVNGFA 675

Query: 497  EASSATLTVGSIPIVTKGLTVDK 429
            E  S  L VGSIP+  K L  +K
Sbjct: 676  EC-SGFLRVGSIPLDPKALQQEK 697


>ref|XP_003550796.1| PREDICTED: uncharacterized protein LOC100818167 [Glycine max]
          Length = 691

 Score =  162 bits (410), Expect = 1e-37
 Identities = 94/210 (44%), Positives = 135/210 (64%)
 Frame = -1

Query: 1034 SRDTQEIKYRQGMEMLKIFKNYTFKTSILDDFMYYEQRQKVMQEEKARLHGKSYDSSFYT 855
            SRDTQEI Y +G+EMLKIFKN+  KTS+LDDFMYYE RQK+MQEEKA+L  +S+ +    
Sbjct: 487  SRDTQEIMYSKGLEMLKIFKNHNLKTSLLDDFMYYENRQKIMQEEKAKLLIRSFKNPLVL 546

Query: 854  PAFVPLKKANGVTDRPPSADETANRHNQLTSSGRKAASTTEQVALNVDVINSSGSEEGNA 675
            P   P +K N V D PP  DE   + +    S ++ +S    V+ +   I S+ S +  A
Sbjct: 547  PTLEPPRKLNFVIDIPPVGDEKNAKMDDEVDSLKQISSAGHIVSSS--EITSTTSVDEKA 604

Query: 674  KKNPVEDANDVTSILKIGSLSIDSKNVEAQPTATVTIASTNTVDVFTVGSMPVKVNGFSE 495
            +K  V D  D+ S+LKIGS++I  K VE +P+  +++A+   +DV TVGSM ++VNGF+E
Sbjct: 605  EKGSV-DKEDIASVLKIGSVTITPKQVETKPSG-ISVANKEPLDVITVGSMQIRVNGFAE 662

Query: 494  ASSATLTVGSIPIVTKGLTVDKQNTGKSSS 405
             SS  L +G+IP+  + L +D  +  K+ S
Sbjct: 663  -SSGFLKIGTIPLDPRTLQLDGGSRVKNGS 691


>ref|XP_003609844.1| YTH domain family protein [Medicago truncatula]
            gi|355510899|gb|AES92041.1| YTH domain family protein
            [Medicago truncatula]
          Length = 651

 Score =  161 bits (407), Expect = 3e-37
 Identities = 94/205 (45%), Positives = 129/205 (62%)
 Frame = -1

Query: 1034 SRDTQEIKYRQGMEMLKIFKNYTFKTSILDDFMYYEQRQKVMQEEKARLHGKSYDSSFYT 855
            SRDTQEI YR+G+EMLKIFKNYT KTS+LDDF+YYE RQKVMQEEK +   K + S    
Sbjct: 455  SRDTQEIMYRKGLEMLKIFKNYTLKTSLLDDFIYYENRQKVMQEEKTKFLMKGFVS---I 511

Query: 854  PAFVPLKKANGVTDRPPSADETANRHNQLTSSGRKAASTTEQVALNVDVINSSGSEEGNA 675
            P   P +K + V +  P++DE  ++ ++L S    + ST      + DV +++  +E   
Sbjct: 512  PVLAPPRKLDNVFEIHPASDEKNSKTDELGSVKHTSVSTAAHNVNSSDVTSTTSVDE--K 569

Query: 674  KKNPVEDANDVTSILKIGSLSIDSKNVEAQPTATVTIASTNTVDVFTVGSMPVKVNGFSE 495
             +N   D  D++S+LKIGS++I  + VE +P      ++T  +DV TVGSM V+VNGFSE
Sbjct: 570  VENDAVDKQDISSVLKIGSVTITPRQVETKP------SNTEPIDVVTVGSMQVRVNGFSE 623

Query: 494  ASSATLTVGSIPIVTKGLTVDKQNT 420
             SS  L VGSIP+  + L   K  T
Sbjct: 624  -SSGVLKVGSIPLDPRSLQAGKGTT 647


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