BLASTX nr result

ID: Coptis24_contig00005768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005768
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633115.1| PREDICTED: asparaginyl-tRNA synthetase, cyto...   162   2e-38
ref|XP_004135659.1| PREDICTED: asparagine--tRNA ligase, cytoplas...   159   2e-37
ref|XP_002277014.1| PREDICTED: asparaginyl-tRNA synthetase, cyto...   157   6e-37
ref|XP_003634952.1| PREDICTED: LOW QUALITY PROTEIN: asparaginyl-...   154   5e-36
gb|AFK33374.1| unknown [Medicago truncatula]                          154   7e-36

>ref|XP_003633115.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic 1-like [Vitis
           vinifera]
          Length = 571

 Score =  162 bits (411), Expect = 2e-38
 Identities = 83/106 (78%), Positives = 94/106 (88%), Gaps = 3/106 (2%)
 Frame = +3

Query: 3   IEAAKKLVSEKGEAV---KSAKAKKEDITDLVTELKKAKDDLTRLEERFKLKPGLPEKDG 173
           IEAAK LV EKGEAV   KSAKA K +IT  V EL KAK++L+RLEER KLKPG+P+KDG
Sbjct: 236 IEAAKALVKEKGEAVAQLKSAKASKGEITASVAELNKAKENLSRLEERSKLKPGIPQKDG 295

Query: 174 KIDYTRDFFARQAFLTVSGQLQVETFACALSNVYTFGPTFRAEHSH 311
           KIDY++DFFARQAFLTVSGQLQVET+ACA+S+VYTFGPTFRAEHSH
Sbjct: 296 KIDYSQDFFARQAFLTVSGQLQVETYACAVSSVYTFGPTFRAEHSH 341


>ref|XP_004135659.1| PREDICTED: asparagine--tRNA ligase, cytoplasmic 1-like [Cucumis
           sativus] gi|449485808|ref|XP_004157279.1| PREDICTED:
           asparagine--tRNA ligase, cytoplasmic 1-like [Cucumis
           sativus]
          Length = 572

 Score =  159 bits (403), Expect = 2e-37
 Identities = 79/106 (74%), Positives = 94/106 (88%), Gaps = 3/106 (2%)
 Frame = +3

Query: 3   IEAAKKLVSEKGEAV---KSAKAKKEDITDLVTELKKAKDDLTRLEERFKLKPGLPEKDG 173
           ++ A+K+V EKGEAV   K+AKA KE+I   V ELKKAK+++ RLEER KLKPG+PEKDG
Sbjct: 237 VDEARKIVKEKGEAVASLKAAKASKEEIGASVLELKKAKENVARLEERAKLKPGIPEKDG 296

Query: 174 KIDYTRDFFARQAFLTVSGQLQVETFACALSNVYTFGPTFRAEHSH 311
           K+DYT+DFFARQAFLTVSGQLQVET+ACALS+VYTFGPTFRAE+SH
Sbjct: 297 KVDYTKDFFARQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSH 342


>ref|XP_002277014.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic 1-like [Vitis
           vinifera]
          Length = 490

 Score =  157 bits (398), Expect = 6e-37
 Identities = 81/106 (76%), Positives = 91/106 (85%), Gaps = 3/106 (2%)
 Frame = +3

Query: 3   IEAAKKLVSEKGEAV---KSAKAKKEDITDLVTELKKAKDDLTRLEERFKLKPGLPEKDG 173
           IEAAK LV EKGEAV   KSAKA   +IT  V EL KAK++L+RLEER KLKPG+P+KDG
Sbjct: 190 IEAAKALVKEKGEAVAQLKSAKASMGEITASVAELNKAKENLSRLEERSKLKPGIPQKDG 249

Query: 174 KIDYTRDFFARQAFLTVSGQLQVETFACALSNVYTFGPTFRAEHSH 311
           KIDY++DFFARQAFLTVSGQLQVET ACA+ +VYTFGPTFRAEHSH
Sbjct: 250 KIDYSQDFFARQAFLTVSGQLQVETHACAIGSVYTFGPTFRAEHSH 295


>ref|XP_003634952.1| PREDICTED: LOW QUALITY PROTEIN: asparaginyl-tRNA synthetase,
           cytoplasmic 1-like [Vitis vinifera]
          Length = 599

 Score =  154 bits (390), Expect = 5e-36
 Identities = 78/106 (73%), Positives = 89/106 (83%), Gaps = 3/106 (2%)
 Frame = +3

Query: 3   IEAAKKLVSEKGEAV---KSAKAKKEDITDLVTELKKAKDDLTRLEERFKLKPGLPEKDG 173
           IEA K LV EKGEAV   KS KA K +IT  V EL KAK++L+RLEER KLKPG+P+KDG
Sbjct: 238 IEADKALVKEKGEAVAQPKSVKASKGEITAFVAELNKAKENLSRLEERSKLKPGIPQKDG 297

Query: 174 KIDYTRDFFARQAFLTVSGQLQVETFACALSNVYTFGPTFRAEHSH 311
           KIDY++DFF RQAFLTVSGQLQVET+ACA+ +VYTFGP FRAEHSH
Sbjct: 298 KIDYSQDFFVRQAFLTVSGQLQVETYACAIGSVYTFGPIFRAEHSH 343


>gb|AFK33374.1| unknown [Medicago truncatula]
          Length = 551

 Score =  154 bits (389), Expect = 7e-36
 Identities = 76/106 (71%), Positives = 93/106 (87%), Gaps = 3/106 (2%)
 Frame = +3

Query: 3   IEAAKKLVSEKGEAV---KSAKAKKEDITDLVTELKKAKDDLTRLEERFKLKPGLPEKDG 173
           +EAAK +V EKGE V   KSAKA K++I+  V ELKKAK+++++LEER KL+PG+P KDG
Sbjct: 216 VEAAKLVVQEKGEVVSQLKSAKADKKEISAAVAELKKAKENVSKLEERSKLQPGIPRKDG 275

Query: 174 KIDYTRDFFARQAFLTVSGQLQVETFACALSNVYTFGPTFRAEHSH 311
           K+DYT+DFFARQAFLTVSGQLQVE++ACALS VYTFGPTFRAE+SH
Sbjct: 276 KVDYTKDFFARQAFLTVSGQLQVESYACALSRVYTFGPTFRAENSH 321


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