BLASTX nr result

ID: Coptis24_contig00005742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005742
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242...   444   e-122
emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]   444   e-122
ref|XP_002523580.1| conserved hypothetical protein [Ricinus comm...   427   e-117
ref|NP_030964.1| uncharacterized protein [Arabidopsis thaliana] ...   425   e-116
ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116

>ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera]
          Length = 559

 Score =  444 bits (1143), Expect = e-122
 Identities = 212/340 (62%), Positives = 251/340 (73%), Gaps = 5/340 (1%)
 Frame = +3

Query: 147  GGDFASGSINLGG-LELCQISQFTEVWRTDYGGPEDFGVTFFEASSLPDGFSILGSYAQA 323
            G  FA G+I+LGG LE+CQIS FT+VW T  GGP++ G TFFE S +P+ F +LG Y+Q 
Sbjct: 38   GEGFAGGTIDLGGGLEVCQISSFTKVWATHEGGPDNLGATFFEPSPMPEEFCMLGCYSQP 97

Query: 324  NNKPLFGGWVLAAKDNQNESSNGTLKMPVDYTLVWSSESMNVTNDSNGYIWLPSPPDGYS 503
            N KPLFG WVLA KDN N    G LK P+DYTLVWSSES+ +  D NGY+WLP+PPDGY 
Sbjct: 98   NKKPLFG-WVLAGKDNTNNPLGGALKKPIDYTLVWSSESLKIKQDGNGYVWLPTPPDGYK 156

Query: 504  AVGLVVTNSTNKPPLEKVRCVRSDLLESGEQDEWIWG----EGTGQIIVYGLRPTTRGTN 671
            AVG V+TN   KP L+K+RCVRSDL +  E D WIWG           VY L+P+ RG  
Sbjct: 157  AVGHVITNLPEKPSLDKIRCVRSDLTDLCEADTWIWGLDKVANANGFNVYDLQPSDRGAQ 216

Query: 672  ALGVQVGTFVVQVAGADTPLPLFCLKNVNFTLAYMPNATQIEALVQAHSPRIYFHPDEDY 851
            AL V VGTFV Q  GA + L L CLKN++  L  MPN  Q++ALVQA+SP +Y HPDE Y
Sbjct: 217  ALAVSVGTFVAQNGGAASSLSLACLKNISSNLYAMPNLAQVDALVQAYSPWVYLHPDEQY 276

Query: 852  LPSSVDWLFSKGALLYQKGNESNPISIQPNGLNLPQGGTDDGAYWLDLPIDEGAKDEVKK 1031
            LPSSV W F  GALLYQ+G ES P++I P G NLPQGG++DGAYWLDLP+D  AK+ VKK
Sbjct: 277  LPSSVSWFFQNGALLYQQGEESKPVNIDPTGSNLPQGGSNDGAYWLDLPVDAKAKETVKK 336

Query: 1032 GDLQSATTYLHIKPMLGATFTDISIWIFYPFNGPATAKVQ 1151
            GDLQ + TY+HIKPMLGATFTDI+IWIFYPFNGPA AKV+
Sbjct: 337  GDLQDSMTYMHIKPMLGATFTDIAIWIFYPFNGPARAKVE 376


>emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]
          Length = 913

 Score =  444 bits (1143), Expect = e-122
 Identities = 212/340 (62%), Positives = 251/340 (73%), Gaps = 5/340 (1%)
 Frame = +3

Query: 147  GGDFASGSINLGG-LELCQISQFTEVWRTDYGGPEDFGVTFFEASSLPDGFSILGSYAQA 323
            G  FA G+I+LGG LE+CQIS FT+VW T  GGP++ G TFFE S +P+ F +LG Y+Q 
Sbjct: 7    GEGFAGGTIDLGGGLEVCQISSFTKVWATHEGGPDNLGATFFEPSPMPEEFCMLGCYSQP 66

Query: 324  NNKPLFGGWVLAAKDNQNESSNGTLKMPVDYTLVWSSESMNVTNDSNGYIWLPSPPDGYS 503
            N KPLFG WVLA KDN N    G LK P+DYTLVWSSES+ +  D NGY+WLP+PPDGY 
Sbjct: 67   NKKPLFG-WVLAGKDNTNNPLGGALKKPIDYTLVWSSESLKIKQDGNGYVWLPTPPDGYK 125

Query: 504  AVGLVVTNSTNKPPLEKVRCVRSDLLESGEQDEWIWG----EGTGQIIVYGLRPTTRGTN 671
            AVG V+TN   KP L+K+RCVRSDL +  E D WIWG           VY L+P+ RG  
Sbjct: 126  AVGHVITNLPEKPSLDKIRCVRSDLTDLCEADTWIWGLDKVANANGFNVYDLQPSDRGAQ 185

Query: 672  ALGVQVGTFVVQVAGADTPLPLFCLKNVNFTLAYMPNATQIEALVQAHSPRIYFHPDEDY 851
            AL V VGTFV Q  GA + L L CLKN++  L  MPN  Q++ALVQA+SP +Y HPDE Y
Sbjct: 186  ALAVSVGTFVAQNGGAASSLSLACLKNISSNLYAMPNLAQVDALVQAYSPWVYLHPDEQY 245

Query: 852  LPSSVDWLFSKGALLYQKGNESNPISIQPNGLNLPQGGTDDGAYWLDLPIDEGAKDEVKK 1031
            LPSSV W F  GALLYQ+G ES P++I P G NLPQGG++DGAYWLDLP+D  AK+ VKK
Sbjct: 246  LPSSVSWFFQNGALLYQQGEESKPVNIDPTGSNLPQGGSNDGAYWLDLPVDAKAKETVKK 305

Query: 1032 GDLQSATTYLHIKPMLGATFTDISIWIFYPFNGPATAKVQ 1151
            GDLQ + TY+HIKPMLGATFTDI+IWIFYPFNGPA AKV+
Sbjct: 306  GDLQDSMTYMHIKPMLGATFTDIAIWIFYPFNGPARAKVE 345


>ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis]
            gi|223537142|gb|EEF38775.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 551

 Score =  427 bits (1097), Expect = e-117
 Identities = 201/339 (59%), Positives = 250/339 (73%), Gaps = 4/339 (1%)
 Frame = +3

Query: 147  GGDFASGSINLGGLELCQISQFTEVWRTDYGGPEDFGVTFFEASSLPDGFSILGSYAQAN 326
            G  F +G+I+LGGL++CQIS   +VW T  GGP++ G +FFE S +P GF +LG Y Q+N
Sbjct: 35   GEGFGNGTIDLGGLQVCQISSLNKVWSTQEGGPDNVGASFFEPSQIPQGFFMLGCYCQSN 94

Query: 327  NKPLFGGWVLAAKDNQNESSNGTLKMPVDYTLVWSSESMNVTNDSNGYIWLPSPPDGYSA 506
            ++PL+G WVLA KD+    + G L+ P+DYTLVWSSES+ +  DS GYIWLP+ PDGY A
Sbjct: 95   SRPLYG-WVLAGKDD----AGGALEKPIDYTLVWSSESLKIKQDSIGYIWLPTAPDGYRA 149

Query: 507  VGLVVTNSTNKPPLEKVRCVRSDLLESGEQDEWIWG----EGTGQIIVYGLRPTTRGTNA 674
            VGLVVT+S  KP L+K+RCVRSDL +  E+D W+WG           V+ LRP+ RGT A
Sbjct: 150  VGLVVTSSPEKPSLDKMRCVRSDLTDQCEKDIWVWGPEKQSDPNGFNVFSLRPSNRGTQA 209

Query: 675  LGVQVGTFVVQVAGADTPLPLFCLKNVNFTLAYMPNATQIEALVQAHSPRIYFHPDEDYL 854
            +GV VGTFV Q    + P  L CLKNV+  L+ MPN  QI+A+ QA+SP IYFHPDE+YL
Sbjct: 210  MGVCVGTFVAQNGNDNNPASLVCLKNVSNNLSCMPNENQIQAIFQAYSPWIYFHPDEEYL 269

Query: 855  PSSVDWLFSKGALLYQKGNESNPISIQPNGLNLPQGGTDDGAYWLDLPIDEGAKDEVKKG 1034
            PSSV W F+ GALLY++G ESNP+ ++ NG NLPQGG +DG YWLDLP+DE AKD VKKG
Sbjct: 270  PSSVSWYFNNGALLYKQGEESNPVKVETNGSNLPQGGANDGVYWLDLPVDEKAKDRVKKG 329

Query: 1035 DLQSATTYLHIKPMLGATFTDISIWIFYPFNGPATAKVQ 1151
            DLQ    YLHIKPM GATFTDI IW+F PFNGPA AK++
Sbjct: 330  DLQETEVYLHIKPMFGATFTDIVIWVFCPFNGPAKAKIE 368


>ref|NP_030964.1| uncharacterized protein [Arabidopsis thaliana]
            gi|15293039|gb|AAK93630.1| unknown protein [Arabidopsis
            thaliana] gi|20197184|gb|AAC16076.2| expressed protein
            [Arabidopsis thaliana] gi|22136978|gb|AAM91718.1| unknown
            protein [Arabidopsis thaliana]
            gi|330255303|gb|AEC10397.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 553

 Score =  425 bits (1092), Expect = e-116
 Identities = 210/339 (61%), Positives = 248/339 (73%), Gaps = 1/339 (0%)
 Frame = +3

Query: 138  YNKGGDFASGSINLGG-LELCQISQFTEVWRTDYGGPEDFGVTFFEASSLPDGFSILGSY 314
            + +G  FA G+I+LGG LE+ Q+S F +VW T  GGP++ G TFFE SS+P GFSILG Y
Sbjct: 38   FTRGDGFAKGTIDLGGGLEVSQVSTFNKVWSTYEGGPDNLGATFFEPSSIPSGFSILGYY 97

Query: 315  AQANNKPLFGGWVLAAKDNQNESSNGTLKMPVDYTLVWSSESMNVTNDSNGYIWLPSPPD 494
            AQ NN+ LFG WVL A+D     S+ TLK PVDYTLV ++ES+ +  D  GY W P PPD
Sbjct: 98   AQPNNRNLFG-WVLTARD----LSSNTLKPPVDYTLVGNTESLKIKQDGTGYFWQPVPPD 152

Query: 495  GYSAVGLVVTNSTNKPPLEKVRCVRSDLLESGEQDEWIWGEGTGQIIVYGLRPTTRGTNA 674
            GY AVGL+VTN + KPPL+K+RC+RSDL E  E D WIWG  T  + +  L+PTTRGT A
Sbjct: 153  GYQAVGLIVTNYSQKPPLDKLRCIRSDLTEQCEADTWIWG--TNGVNISNLKPTTRGTQA 210

Query: 675  LGVQVGTFVVQVAGADTPLPLFCLKNVNFTLAYMPNATQIEALVQAHSPRIYFHPDEDYL 854
             GV VGTF  Q   +  P  L CLKN     + MPN +QIE L Q  SP IYFHPDE+YL
Sbjct: 211  TGVYVGTFTWQTQNSSPP-SLSCLKNTKLDFSTMPNGSQIEELFQTFSPCIYFHPDEEYL 269

Query: 855  PSSVDWLFSKGALLYQKGNESNPISIQPNGLNLPQGGTDDGAYWLDLPIDEGAKDEVKKG 1034
            PSSV W F+ GALLY+KG ES PI I+ NG NLPQGG++DG+YWLDLPID+  K+ VKKG
Sbjct: 270  PSSVTWYFNNGALLYKKGEESKPIPIESNGSNLPQGGSNDGSYWLDLPIDKNGKERVKKG 329

Query: 1035 DLQSATTYLHIKPMLGATFTDISIWIFYPFNGPATAKVQ 1151
            DLQS   YLHIKPMLGATFTDISIWIFYPFNGPA AKV+
Sbjct: 330  DLQSTKVYLHIKPMLGATFTDISIWIFYPFNGPAKAKVK 368


>ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|222872727|gb|EEF09858.1|
            predicted protein [Populus trichocarpa]
          Length = 587

 Score =  423 bits (1088), Expect = e-116
 Identities = 205/339 (60%), Positives = 248/339 (73%), Gaps = 5/339 (1%)
 Frame = +3

Query: 150  GDFASGSINLG-GLELCQISQFTEVWRTDYGGPEDFGVTFFEASSLPDGFSILGSYAQAN 326
            G F SG I+LG GL++CQIS F +VW T  GGP+D G +FFE S LP GFS+LG Y+Q N
Sbjct: 72   GGFGSGIIDLGDGLQVCQISSFNKVWATHEGGPDDLGASFFEPSQLPQGFSMLGCYSQPN 131

Query: 327  NKPLFGGWVLAAKDNQNESSNGTLKMPVDYTLVWSSESMNVTNDSNGYIWLPSPPDGYSA 506
            N+ L+G WVLA +D     +   LK P+DYTLVWSSES+ +  D  GYIWLP+PPDGY A
Sbjct: 132  NRSLYG-WVLAGRDE----TGSALKQPIDYTLVWSSESLQIKQDGVGYIWLPTPPDGYKA 186

Query: 507  VGLVVTNSTNKPPLEKVRCVRSDLLESGEQDEWIWGEGTGQII----VYGLRPTTRGTNA 674
            +G VVT S  KPPL K+RCVRSDL E  E D W+WG G    +    V+ L P+ RGT A
Sbjct: 187  LGHVVTKSPQKPPLGKIRCVRSDLTEQCEFDSWVWGLGKESDLNGFNVFSLFPSNRGTQA 246

Query: 675  LGVQVGTFVVQVAGADTPLPLFCLKNVNFTLAYMPNATQIEALVQAHSPRIYFHPDEDYL 854
            +GV VGTFV Q      P+ L CLKNV   L+ MPN  QI+A+ QA+SP IYFHPDE+YL
Sbjct: 247  MGVCVGTFVAQKT-TTAPVSLSCLKNVVSNLSCMPNLDQIKAIFQAYSPWIYFHPDEEYL 305

Query: 855  PSSVDWLFSKGALLYQKGNESNPISIQPNGLNLPQGGTDDGAYWLDLPIDEGAKDEVKKG 1034
            PSSV+W F  GALLY++G ES P+ I+ NG NLPQGG++DGAYWLDLP++EGAKD VKKG
Sbjct: 306  PSSVEWYFVNGALLYERGEESKPVPIESNGSNLPQGGSNDGAYWLDLPVEEGAKDRVKKG 365

Query: 1035 DLQSATTYLHIKPMLGATFTDISIWIFYPFNGPATAKVQ 1151
            DLQ +  YLHIKPM GA FTDI +W+FYPFNGP+ AKV+
Sbjct: 366  DLQDSRVYLHIKPMFGAAFTDIVVWVFYPFNGPSKAKVE 404


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