BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005740
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272147.1| PREDICTED: upstream activation factor subuni...   140   2e-31
emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]   140   2e-31
gb|AAM62986.1| unknown [Arabidopsis thaliana]                         130   1e-28
gb|AAK62445.1|AF387000_1 putative protein [Arabidopsis thaliana]      130   1e-28
ref|NP_195155.1| SWIB/MDM2 domain-containing protein [Arabidopsi...   130   1e-28

>ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera]
          Length = 145

 Score =  140 bits (352), Expect = 2e-31
 Identities = 67/84 (79%), Positives = 72/84 (85%)
 Frame = +1

Query: 313 KAAPSGISKPIPISAALQDVFGVPEIARTQALKQIWAYIKQHNLQDPENKKIIVCDEKLK 492
           K  P GI KP  IS  +QD  GVPEI RTQALKQIWAYIKQHNLQDPENKKIIVCDEKLK
Sbjct: 62  KREPRGIMKPRRISPEMQDFLGVPEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLK 121

Query: 493 KIFAGKERVGFLEISGLLNPHFIK 564
            IFAGK+RVGFLEI+GL+NPHF+K
Sbjct: 122 SIFAGKDRVGFLEIAGLINPHFLK 145


>emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
          Length = 145

 Score =  140 bits (352), Expect = 2e-31
 Identities = 67/84 (79%), Positives = 72/84 (85%)
 Frame = +1

Query: 313 KAAPSGISKPIPISAALQDVFGVPEIARTQALKQIWAYIKQHNLQDPENKKIIVCDEKLK 492
           K  P GI KP  IS  +QD  GVPEI RTQALKQIWAYIKQHNLQDPENKKIIVCDEKLK
Sbjct: 62  KREPRGIMKPRRISPEMQDFLGVPEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLK 121

Query: 493 KIFAGKERVGFLEISGLLNPHFIK 564
            IFAGK+RVGFLEI+GL+NPHF+K
Sbjct: 122 SIFAGKDRVGFLEIAGLINPHFLK 145


>gb|AAM62986.1| unknown [Arabidopsis thaliana]
          Length = 144

 Score =  130 bits (328), Expect = 1e-28
 Identities = 61/86 (70%), Positives = 72/86 (83%)
 Frame = +1

Query: 304 TKKKAAPSGISKPIPISAALQDVFGVPEIARTQALKQIWAYIKQHNLQDPENKKIIVCDE 483
           T K   P GI KP P+S A+QDV GVPEI RTQALK+IWAYIK+H+LQDP+NK+ I+CDE
Sbjct: 59  TTKTREPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDE 118

Query: 484 KLKKIFAGKERVGFLEISGLLNPHFI 561
           KLKKIF GKERVGFLEI+ L+ PHF+
Sbjct: 119 KLKKIFEGKERVGFLEIAKLIGPHFL 144


>gb|AAK62445.1|AF387000_1 putative protein [Arabidopsis thaliana]
          Length = 144

 Score =  130 bits (328), Expect = 1e-28
 Identities = 61/86 (70%), Positives = 72/86 (83%)
 Frame = +1

Query: 304 TKKKAAPSGISKPIPISAALQDVFGVPEIARTQALKQIWAYIKQHNLQDPENKKIIVCDE 483
           T K   P GI KP P+S A+QDV GVPEI RTQALK+IWAYIK+H+LQDP+NK+ I+CDE
Sbjct: 59  TTKTREPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDE 118

Query: 484 KLKKIFAGKERVGFLEISGLLNPHFI 561
           KLKKIF GKERVGFLEI+ L+ PHF+
Sbjct: 119 KLKKIFEGKERVGFLEIAKLIGPHFL 144


>ref|NP_195155.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
           gi|4455174|emb|CAB36706.1| putative protein [Arabidopsis
           thaliana] gi|7270379|emb|CAB80146.1| putative protein
           [Arabidopsis thaliana] gi|24899741|gb|AAN65085.1|
           putative protein [Arabidopsis thaliana]
           gi|332660955|gb|AEE86355.1| SWIB/MDM2 domain-containing
           protein [Arabidopsis thaliana]
          Length = 144

 Score =  130 bits (328), Expect = 1e-28
 Identities = 61/86 (70%), Positives = 72/86 (83%)
 Frame = +1

Query: 304 TKKKAAPSGISKPIPISAALQDVFGVPEIARTQALKQIWAYIKQHNLQDPENKKIIVCDE 483
           T K   P GI KP P+S A+QDV GVPEI RTQALK+IWAYIK+H+LQDP+NK+ I+CDE
Sbjct: 59  TTKTREPRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDE 118

Query: 484 KLKKIFAGKERVGFLEISGLLNPHFI 561
           KLKKIF GKERVGFLEI+ L+ PHF+
Sbjct: 119 KLKKIFEGKERVGFLEIAKLIGPHFL 144