BLASTX nr result
ID: Coptis24_contig00005735
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005735 (1191 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinif... 348 2e-93 gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum] 328 1e-87 ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicu... 323 4e-86 ref|NP_001234859.1| beta-expansin precursor [Solanum lycopersicu... 308 1e-81 gb|ABC47127.1| beta expansin 1 precursor [Solanum tuberosum] 308 1e-81 >ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinifera] gi|297743578|emb|CBI36445.3| unnamed protein product [Vitis vinifera] Length = 279 Score = 348 bits (893), Expect = 2e-93 Identities = 174/252 (69%), Positives = 187/252 (74%), Gaps = 2/252 (0%) Frame = +1 Query: 172 ELCFCFHAKRSTLSTMATNWSPARATWXXXXXXXXXXXXXXXXXQAVSQSPFSSLITAAG 351 E C F K LS T+W+ A ATW AVSQ PFSS+IT G Sbjct: 28 ETCHSFKPKYFNLSRAGTHWASAGATWYGSPEGAGSDGGSCGYGNAVSQPPFSSMITGIG 87 Query: 352 PSLYQSGKECGACYRVKCTN--HPSCSGSPVRVVITDSCPGGPCASDSAHFDLSGTAFGA 525 PSLY+SGKECGACY+VKCT HPSCSG PVRVVITD CPGGPCAS SAHFDLSGTAFGA Sbjct: 88 PSLYKSGKECGACYQVKCTKRMHPSCSGRPVRVVITDFCPGGPCASQSAHFDLSGTAFGA 147 Query: 526 MARPGQEEQLRGAGVLDINYARVACDYSGTTITFRVDAGSNSNYFAVVVEFEEGDGDLAG 705 MA PGQEE+LR GVL+I YARVACDYSG TI F VD G+N N F+V+VEFEEGDGDLAG Sbjct: 148 MAIPGQEEKLRNVGVLEIRYARVACDYSGKTIAFHVDLGANPNSFSVLVEFEEGDGDLAG 207 Query: 706 VALREESNESMAWREMQQSWGVVWKLDAGSELHAPFSIRLKSQYSGQTLVATNVIPQGWK 885 VAL+E S WR MQQSWG VWKLDAG EL PFSI+L SQYSGQTLVA NVIP GWK Sbjct: 208 VALKETLKGSGKWRAMQQSWGAVWKLDAGYELKPPFSIQLTSQYSGQTLVAKNVIPDGWK 267 Query: 886 PGGTYRSLVNFL 921 PG TYRSLVN+L Sbjct: 268 PGSTYRSLVNYL 279 >gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum] Length = 279 Score = 328 bits (842), Expect = 1e-87 Identities = 164/251 (65%), Positives = 184/251 (73%), Gaps = 5/251 (1%) Frame = +1 Query: 181 FCFHAKRSTLSTMATNWSPARATWXXXXXXXXXXXXXXXXXQAVSQSPFSSLITAAGPSL 360 F + K LST AT+W A ATW AVSQ+PFSS +T GPSL Sbjct: 27 FGYKPKHFNLSTHATHWGTAGATWYGSPHGAGSDGGSCGYGSAVSQAPFSSFVTGIGPSL 86 Query: 361 YQSGKECGACYRVKCTN--HPSCSGSPVRVVITDSCPGGPCASDSAHFDLSGTAFGAMAR 534 Y+SGKECGACY+VKCT H SCSG VRVVITD CPGGPC + SAHFDLSGTAFG+MA Sbjct: 87 YKSGKECGACYQVKCTKKMHGSCSGKGVRVVITDFCPGGPCVAQSAHFDLSGTAFGSMAI 146 Query: 535 PGQEEQLRGAGVLDINYARVACDYSGTTITFRVDAGSNSNYFAVVVEFEEGDGDLAGVAL 714 PGQE++LR AGVL I YARVACDYS I F VD GSNS YFAVV+EFEEGDGDLA V L Sbjct: 147 PGQEQKLRDAGVLQIRYARVACDYSRKNIVFHVDQGSNSEYFAVVIEFEEGDGDLAKVEL 206 Query: 715 REESN---ESMAWREMQQSWGVVWKLDAGSELHAPFSIRLKSQYSGQTLVATNVIPQGWK 885 +E+ + ++ WR+MQQSWG VWKLDAGSELH PFSIRL SQYS Q L+A NVIP GW+ Sbjct: 207 KEKISSITKNSKWRQMQQSWGAVWKLDAGSELHPPFSIRLTSQYSDQILIAKNVIPTGWQ 266 Query: 886 PGGTYRSLVNF 918 PG TYRSLVN+ Sbjct: 267 PGATYRSLVNY 277 >ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicum] gi|81367673|gb|ABB71677.1| beta expansin precursor [Solanum lycopersicum] Length = 285 Score = 323 bits (829), Expect = 4e-86 Identities = 162/257 (63%), Positives = 183/257 (71%), Gaps = 11/257 (4%) Frame = +1 Query: 181 FCFHAKRSTLSTMATNWSPARATWXXXXXXXXXXXXXXXXXQAVSQSPFSSLITAAGPSL 360 F + K LST AT+W A ATW AVS++P SS +T GPSL Sbjct: 27 FGYKPKHFNLSTHATHWGTAGATWYGSPHGAGSDGGSCGYGSAVSEAPLSSFVTGIGPSL 86 Query: 361 YQSGKECGACYRVKCTN--HPSCSGSPVRVVITDSCPGGPCASDSAHFDLSGTAFGAMAR 534 Y+SGKECGACY+VKCT H SCSG VRVVITD CPGGPC + SAHFDLSGTAFGAMA Sbjct: 87 YKSGKECGACYQVKCTKKMHRSCSGKGVRVVITDFCPGGPCVAQSAHFDLSGTAFGAMAI 146 Query: 535 PGQEEQLRGAGVLDINYARVACDYSGTTITFRVDAGSNSNYFAVVVEFEEGDGDLAGVAL 714 PGQE++LR AGVL I YARVACDYS I F VD GSNS YFAVV+EFE+GDGDLA V L Sbjct: 147 PGQEQKLRDAGVLQIRYARVACDYSRKNIVFHVDQGSNSEYFAVVIEFEQGDGDLAKVEL 206 Query: 715 REESNESM---------AWREMQQSWGVVWKLDAGSELHAPFSIRLKSQYSGQTLVATNV 867 +E+ + S+ WR+MQQSWG VWKLDAGS+LH PFSIRL SQYS Q L+A NV Sbjct: 207 KEKRSSSIISRGNKNNYKWRQMQQSWGAVWKLDAGSKLHPPFSIRLTSQYSDQILIANNV 266 Query: 868 IPQGWKPGGTYRSLVNF 918 IP GW+PG TYRSLVN+ Sbjct: 267 IPTGWQPGATYRSLVNY 283 >ref|NP_001234859.1| beta-expansin precursor [Solanum lycopersicum] gi|82569705|gb|ABB83474.1| beta-expansin precursor [Solanum lycopersicum] Length = 275 Score = 308 bits (790), Expect = 1e-81 Identities = 151/249 (60%), Positives = 182/249 (73%), Gaps = 2/249 (0%) Frame = +1 Query: 178 CFCFHAKRSTLSTMATN--WSPARATWXXXXXXXXXXXXXXXXXQAVSQSPFSSLITAAG 351 C C H KR +S + +N WSP ATW AV Q PFSSLI AAG Sbjct: 27 CSCLHPKRFNVSKVQSNSDWSPPGATWYGSPSGAGSDGGACGYTNAVDQPPFSSLIAAAG 86 Query: 352 PSLYQSGKECGACYRVKCTNHPSCSGSPVRVVITDSCPGGPCASDSAHFDLSGTAFGAMA 531 PSL++SGK CGACY+VKCT + +CSG PVRVVITDSCPGGPC S+SAHFDLSGT+FGAMA Sbjct: 87 PSLFKSGKGCGACYQVKCTGNKACSGKPVRVVITDSCPGGPCLSESAHFDLSGTSFGAMA 146 Query: 532 RPGQEEQLRGAGVLDINYARVACDYSGTTITFRVDAGSNSNYFAVVVEFEEGDGDLAGVA 711 GQ +QLR AGV+ I Y RV C+Y G +TF VD+GSNSNYFA +VE+E+GDGDL V Sbjct: 147 ISGQADQLRNAGVIQIQYKRVECNYPGVKLTFHVDSGSNSNYFAALVEYEDGDGDLNSVD 206 Query: 712 LREESNESMAWREMQQSWGVVWKLDAGSELHAPFSIRLKSQYSGQTLVATNVIPQGWKPG 891 L+ ++ +S +W+ MQQSWG VWKLD+GS L APFS++L + SGQT+VA VIP GW+PG Sbjct: 207 LK-QALDSESWQPMQQSWGAVWKLDSGSSLVAPFSLKLTGE-SGQTVVANGVIPAGWQPG 264 Query: 892 GTYRSLVNF 918 TYRS+VNF Sbjct: 265 KTYRSVVNF 273 >gb|ABC47127.1| beta expansin 1 precursor [Solanum tuberosum] Length = 276 Score = 308 bits (790), Expect = 1e-81 Identities = 152/250 (60%), Positives = 185/250 (74%), Gaps = 3/250 (1%) Frame = +1 Query: 178 CFCFHAKR-STLSTMATN--WSPARATWXXXXXXXXXXXXXXXXXQAVSQSPFSSLITAA 348 C CFH KR + +S + +N WSPA ATW AV Q PFSSLI AA Sbjct: 27 CSCFHPKRLNNVSKIQSNSDWSPAGATWYGSPSGAGSDGGACGYTNAVDQPPFSSLIAAA 86 Query: 349 GPSLYQSGKECGACYRVKCTNHPSCSGSPVRVVITDSCPGGPCASDSAHFDLSGTAFGAM 528 GPSL++SGK CGACY+VKCT + +CSG PVRVVITDSCPGGPC S+SAHFDLSGT+FGAM Sbjct: 87 GPSLFKSGKGCGACYQVKCTGNKACSGKPVRVVITDSCPGGPCLSESAHFDLSGTSFGAM 146 Query: 529 ARPGQEEQLRGAGVLDINYARVACDYSGTTITFRVDAGSNSNYFAVVVEFEEGDGDLAGV 708 A GQ +QLR AGVL + Y RV C+Y G +TF VD+GSNSNYFA +VE+E+GDGDL V Sbjct: 147 AISGQADQLRNAGVLQVQYKRVECNYPGVKLTFHVDSGSNSNYFAALVEYEDGDGDLNRV 206 Query: 709 ALREESNESMAWREMQQSWGVVWKLDAGSELHAPFSIRLKSQYSGQTLVATNVIPQGWKP 888 L+ ++ +S +W+ MQQSWG VWKLD+GS L APFS++L + SGQT+VA VIP GW+P Sbjct: 207 DLK-QALDSESWQPMQQSWGAVWKLDSGSSLVAPFSLKLTGE-SGQTVVANGVIPAGWQP 264 Query: 889 GGTYRSLVNF 918 G TYRS++NF Sbjct: 265 GKTYRSVINF 274