BLASTX nr result
ID: Coptis24_contig00005727
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005727 (251 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003553650.1| PREDICTED: ABC transporter C family member 4... 108 6e-22 ref|XP_002321011.1| multidrug resistance protein ABC transporter... 107 8e-22 ref|XP_002301476.1| multidrug resistance protein ABC transporter... 106 2e-21 ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4... 105 3e-21 dbj|BAF00814.1| ABC transporter-like protein [Arabidopsis thaliana] 99 3e-19 >ref|XP_003553650.1| PREDICTED: ABC transporter C family member 4-like [Glycine max] Length = 1504 Score = 108 bits (269), Expect = 6e-22 Identities = 48/83 (57%), Positives = 61/83 (73%) Frame = -3 Query: 249 AYGWWGIVAVLLMSLLWQISLMAGDYWLAFETGEDRGASFVPSFFFRVYAVLAAVSCVFV 70 A+GWWGI VL+ SLLWQ S+MA DYWLA+ET E+R F PS F +YA++ AVS + V Sbjct: 939 AFGWWGITVVLIFSLLWQASMMASDYWLAYETSEERAKMFNPSLFISIYAIITAVSIILV 998 Query: 69 LIRNVVLTYVGLKTAQILCKQIL 1 +IR+ + T +GLKTAQI QIL Sbjct: 999 VIRSYIFTLLGLKTAQIFFTQIL 1021 >ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222861784|gb|EEE99326.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1507 Score = 107 bits (268), Expect = 8e-22 Identities = 47/76 (61%), Positives = 61/76 (80%) Frame = -3 Query: 249 AYGWWGIVAVLLMSLLWQISLMAGDYWLAFETGEDRGASFVPSFFFRVYAVLAAVSCVFV 70 A+GWWG V LL+SL+WQ SLMAGDYWLAFET ++R A+F PS F VY ++AAVS VF+ Sbjct: 942 AFGWWGAVVALLLSLVWQASLMAGDYWLAFETADERAATFKPSLFISVYGIIAAVSVVFL 1001 Query: 69 LIRNVVLTYVGLKTAQ 22 ++R++ T +GLKTAQ Sbjct: 1002 IMRSLFFTLMGLKTAQ 1017 >ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222843202|gb|EEE80749.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1508 Score = 106 bits (264), Expect = 2e-21 Identities = 49/83 (59%), Positives = 63/83 (75%) Frame = -3 Query: 249 AYGWWGIVAVLLMSLLWQISLMAGDYWLAFETGEDRGASFVPSFFFRVYAVLAAVSCVFV 70 A+GWWGIV +L+SL+WQ S MAGDYWLA+ET E+R A F PS F VY ++AAVS VF+ Sbjct: 943 AFGWWGIVVAMLLSLVWQASQMAGDYWLAYETAEERAAMFKPSLFISVYGIIAAVSVVFL 1002 Query: 69 LIRNVVLTYVGLKTAQILCKQIL 1 +R++ +T +GLKTAQ L IL Sbjct: 1003 AMRSLFVTLMGLKTAQKLFGGIL 1025 >ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4-like [Glycine max] Length = 1501 Score = 105 bits (263), Expect = 3e-21 Identities = 46/83 (55%), Positives = 63/83 (75%) Frame = -3 Query: 249 AYGWWGIVAVLLMSLLWQISLMAGDYWLAFETGEDRGASFVPSFFFRVYAVLAAVSCVFV 70 A+GWWGI+AV+ +S+LWQ S+MA DYWLA+ET E+R F PS F +YA++A VS V + Sbjct: 936 AFGWWGIIAVISLSVLWQASMMASDYWLAYETSEERAQLFNPSMFISIYAIIAVVSVVLI 995 Query: 69 LIRNVVLTYVGLKTAQILCKQIL 1 ++R+ +T +GLKTAQI QIL Sbjct: 996 VLRSYSVTVLGLKTAQIFFSQIL 1018 >dbj|BAF00814.1| ABC transporter-like protein [Arabidopsis thaliana] Length = 940 Score = 99.4 bits (246), Expect = 3e-19 Identities = 46/83 (55%), Positives = 58/83 (69%) Frame = -3 Query: 249 AYGWWGIVAVLLMSLLWQISLMAGDYWLAFETGEDRGASFVPSFFFRVYAVLAAVSCVFV 70 AYGWWG++ V+ S+ WQ SLMA DYWLA+ET SF + F RVY ++AAVS V V Sbjct: 375 AYGWWGMILVVFFSVAWQASLMASDYWLAYETSAKNEVSFDATVFIRVYVIIAAVSIVLV 434 Query: 69 LIRNVVLTYVGLKTAQILCKQIL 1 +R +T++GLKTAQI KQIL Sbjct: 435 CLRAFYVTHLGLKTAQIFFKQIL 457