BLASTX nr result

ID: Coptis24_contig00005719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005719
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512241.1| DNA-damage-repair/toleration protein DRT102,...    92   6e-17
ref|XP_003554696.1| PREDICTED: DNA-damage-repair/toleration prot...    88   6e-16
gb|ACU19951.1| unknown [Glycine max]                                   88   6e-16
ref|XP_003633653.1| PREDICTED: DNA-damage-repair/toleration prot...    84   9e-15
ref|XP_002277284.1| PREDICTED: DNA-damage-repair/toleration prot...    84   9e-15

>ref|XP_002512241.1| DNA-damage-repair/toleration protein DRT102, putative [Ricinus
           communis] gi|223548202|gb|EEF49693.1|
           DNA-damage-repair/toleration protein DRT102, putative
           [Ricinus communis]
          Length = 318

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
 Frame = +3

Query: 27  MAEESRRPLKIITGADSLGSPLKDALVDHLKSLNIQVEDIGTDKYYSVGEEVGRRVSAAG 206
           MA +S +PLKIITGADSLG  LKDAL+ HL+SLNI VED+GT  YY++G EVGRRVSAA 
Sbjct: 1   MAADSPQPLKIITGADSLGCSLKDALISHLRSLNIDVEDLGTSSYYTIGAEVGRRVSAAN 60

Query: 207 DDT---DTRGLV 233
             +   + RGLV
Sbjct: 61  STSPSPEIRGLV 72


>ref|XP_003554696.1| PREDICTED: DNA-damage-repair/toleration protein DRT102-like
           [Glycine max]
          Length = 300

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/69 (65%), Positives = 52/69 (75%)
 Frame = +3

Query: 27  MAEESRRPLKIITGADSLGSPLKDALVDHLKSLNIQVEDIGTDKYYSVGEEVGRRVSAAG 206
           MA E  RP+KII  AD  G+PLKDALV HL++LNIQVED+GT  YYS G EVGRRVS + 
Sbjct: 1   MAAEPTRPVKIIAAADDFGTPLKDALVAHLRTLNIQVEDLGTSSYYSAGAEVGRRVSQS- 59

Query: 207 DDTDTRGLV 233
             +D RGLV
Sbjct: 60  SSSDIRGLV 68


>gb|ACU19951.1| unknown [Glycine max]
          Length = 300

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/69 (65%), Positives = 52/69 (75%)
 Frame = +3

Query: 27  MAEESRRPLKIITGADSLGSPLKDALVDHLKSLNIQVEDIGTDKYYSVGEEVGRRVSAAG 206
           MA E  RP+KII  AD  G+PLKDALV HL++LNIQVED+GT  YYS G EVGRRVS + 
Sbjct: 1   MAAEPTRPVKIIAAADDFGTPLKDALVAHLRTLNIQVEDLGTSSYYSAGAEVGRRVSQS- 59

Query: 207 DDTDTRGLV 233
             +D RGLV
Sbjct: 60  SSSDIRGLV 68


>ref|XP_003633653.1| PREDICTED: DNA-damage-repair/toleration protein DRT102-like isoform
           2 [Vitis vinifera]
          Length = 312

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/70 (62%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = +3

Query: 27  MAEESR-RPLKIITGADSLGSPLKDALVDHLKSLNIQVEDIGTDKYYSVGEEVGRRVSAA 203
           MAE+      KI+TGADS G  LK+ALV HLKSLNI+VED+GTD YYSV  E+GRRVS++
Sbjct: 1   MAEDGEPHRFKIVTGADSFGCSLKEALVSHLKSLNIEVEDVGTDSYYSVAAEIGRRVSSS 60

Query: 204 GDDTDTRGLV 233
            +  DTRGL+
Sbjct: 61  PE--DTRGLL 68


>ref|XP_002277284.1| PREDICTED: DNA-damage-repair/toleration protein DRT102-like isoform
           1 [Vitis vinifera]
          Length = 300

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/70 (62%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = +3

Query: 27  MAEESR-RPLKIITGADSLGSPLKDALVDHLKSLNIQVEDIGTDKYYSVGEEVGRRVSAA 203
           MAE+      KI+TGADS G  LK+ALV HLKSLNI+VED+GTD YYSV  E+GRRVS++
Sbjct: 1   MAEDGEPHRFKIVTGADSFGCSLKEALVSHLKSLNIEVEDVGTDSYYSVAAEIGRRVSSS 60

Query: 204 GDDTDTRGLV 233
            +  DTRGL+
Sbjct: 61  PE--DTRGLL 68


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