BLASTX nr result
ID: Coptis24_contig00005693
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005693 (2410 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266... 146 3e-32 emb|CBI34075.3| unnamed protein product [Vitis vinifera] 142 4e-31 gb|ABK25440.1| unknown [Picea sitchensis] 96 3e-17 ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232... 86 4e-14 ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [M... 80 2e-12 >ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266805 [Vitis vinifera] Length = 719 Score = 146 bits (368), Expect = 3e-32 Identities = 81/162 (50%), Positives = 107/162 (66%), Gaps = 3/162 (1%) Frame = +2 Query: 68 EKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYGRHMERPSSYRGSQSHDY 247 E+R+ Y+D Y SR SEYLDSP ++ Y R++ERP++Y HDY Sbjct: 510 ERRY-YKDNYSSRGSEYLDSPPRNVSRAAGHRAPLYE-DDDYDRYLERPTNYHDGHRHDY 567 Query: 248 GSVGS-KRSHASMEEYQSRFPESTVRQSRARFDYGVSNDDMPYNDRAYGSESTS-ARVGR 421 GS+ S KRSH++MEE SR+ E +R SRARFDYG SN +PY+D YGSESTS R+GR Sbjct: 568 GSISSSKRSHSAMEEVHSRYAEPPIRHSRARFDYGGSNSGLPYDDH-YGSESTSERRMGR 626 Query: 422 GTHLGYERGSRSSAGHSQGVYDTHTS-SAYSRDEGRRADMGG 544 G+ LGY+ G RSS+GHS+G+Y+T TS + Y RD+ R + G Sbjct: 627 GSRLGYDGGMRSSSGHSRGMYETRTSTTGYRRDDISRGNEEG 668 >emb|CBI34075.3| unnamed protein product [Vitis vinifera] Length = 783 Score = 142 bits (358), Expect = 4e-31 Identities = 76/147 (51%), Positives = 100/147 (68%), Gaps = 2/147 (1%) Frame = +2 Query: 68 EKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYGRHMERPSSYRGSQSHDY 247 E+R+ Y+D Y SR SEYLDSP ++ Y R++ERP++Y HDY Sbjct: 571 ERRY-YKDNYSSRGSEYLDSPPRNVSRAAGHRAPLYE-DDDYDRYLERPTNYHDGHRHDY 628 Query: 248 GSVGS-KRSHASMEEYQSRFPESTVRQSRARFDYGVSNDDMPYNDRAYGSESTS-ARVGR 421 GS+ S KRSH++MEE SR+ E +R SRARFDYG SN +PY+D YGSESTS R+GR Sbjct: 629 GSISSSKRSHSAMEEVHSRYAEPPIRHSRARFDYGGSNSGLPYDDH-YGSESTSERRMGR 687 Query: 422 GTHLGYERGSRSSAGHSQGVYDTHTSS 502 G+ LGY+ G RSS+GHS+G+Y+T TS+ Sbjct: 688 GSRLGYDGGMRSSSGHSRGMYETRTST 714 >gb|ABK25440.1| unknown [Picea sitchensis] Length = 376 Score = 96.3 bits (238), Expect = 3e-17 Identities = 69/177 (38%), Positives = 91/177 (51%), Gaps = 3/177 (1%) Frame = +2 Query: 26 SKTRSSDFVTKGANEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYGRHM 205 S + DF T+ A +R SYRD+Y +R S EESYGR + Sbjct: 162 SSRSAPDFSTRAAAARRSSYRDSYANRGSGSYSDNAPPRGVSRTVSRRPPYPEESYGRRI 221 Query: 206 ERPSSYRGSQSHDYGSV-GSKRSHASMEEYQSRFPESTVRQSRARFDYGVSNDDMPYNDR 382 ++P YR S+ DY SV GSKR ++++EE R+ E +R SRAR DYGVS Y D Sbjct: 222 DKP--YRDSRGRDYDSVSGSKRPYSAVEE-PPRYGEPAMRNSRARLDYGVSASASQYGD- 277 Query: 383 AYGSESTSARVGRGTHLGYERGSRSSAGHSQGVYDTHTSSAYSRDEGRR--ADMGGA 547 YG S R+GRG+ LGY G S+ S G+YD H S S G + +GG+ Sbjct: 278 -YGE---SVRLGRGSQLGY--GGSSARQDSYGLYDGHQSRVGSGYGGSKTYGSLGGS 328 >ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera] gi|297734640|emb|CBI16691.3| unnamed protein product [Vitis vinifera] Length = 812 Score = 86.3 bits (212), Expect = 4e-14 Identities = 63/172 (36%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Frame = +2 Query: 44 DFVTKGANEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYGRHMERPS-- 217 D+ ++ A E+R SYRD Y +R S Y D P+ +++YG+ ERP Sbjct: 607 DYGSRVAPERRPSYRDDYATRGSGYSDIPRNTSRTAARRTYE----DDAYGQRFERPPPP 662 Query: 218 SYRGSQSHDYGSV-GSKRSHASMEEYQSRFPESTVRQSRARFDYGVSNDDMPYNDRAYGS 394 SYR + DY S+ GSKR + ++++ R+ +++VRQSRAR DY +S Y D AYG Sbjct: 663 SYREGRPRDYDSIAGSKRPYGALDDVPPRYADASVRQSRARLDYEMSAGASQYGD-AYGD 721 Query: 395 ESTSARVGRGTHLGYERGSRS--SAGHSQGVYDTHTSSAYSRDEGRRADMGG 544 R+GR ++LGY GSRS S+ S G+Y + Y +D+GG Sbjct: 722 -----RLGR-SNLGY-GGSRSSMSSQDSHGLYSSRQGMGYGGGSFGGSDVGG 766 >ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula] gi|355502103|gb|AES83306.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula] Length = 824 Score = 80.5 bits (197), Expect = 2e-12 Identities = 60/170 (35%), Positives = 85/170 (50%), Gaps = 11/170 (6%) Frame = +2 Query: 44 DFVTKGANEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXXEESYGRHMERPS-- 217 D+ ++ +E+R +YRD YP R S+Y D P+ ++ Y + ERP Sbjct: 588 DYGSRMTSERRPTYRD-YPPRGSDYSDPPRSTARAAPRRGYV----DDGYSQRYERPPPP 642 Query: 218 ------SYRGSQSHDYGSV-GSKRSHASMEEYQSRFPESTVRQSRARFDYGVSNDDMPYN 376 SYR + DY S+ GSKRS+A++++ R+ ++ RQSRAR +Y Y Sbjct: 643 PPPSHPSYREGRPRDYDSLSGSKRSYAAVDDVPPRYADTGARQSRARLEYDYGGSASQYG 702 Query: 377 DRAYGSESTSARVGRGTHLGYERGSRSSAG--HSQGVYDTHTSSAYSRDE 520 D AYG RVGR + LGY GSRSS S GVY + +Y E Sbjct: 703 D-AYGD-----RVGRSS-LGYGSGSRSSISGQDSHGVYSSRQGMSYGGGE 745