BLASTX nr result

ID: Coptis24_contig00005690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005690
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent hel...   303   1e-80
ref|XP_002526386.1| conserved hypothetical protein [Ricinus comm...   302   3e-80
ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent hel...   301   7e-80
emb|CBI15784.3| unnamed protein product [Vitis vinifera]              301   7e-80
emb|CAN79469.1| hypothetical protein VITISV_016935 [Vitis vinifera]   301   7e-80

>ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine
           max]
          Length = 920

 Score =  303 bits (777), Expect = 1e-80
 Identities = 145/198 (73%), Positives = 171/198 (86%), Gaps = 1/198 (0%)
 Frame = +1

Query: 1   KYFGYTSFRPLQKEIIEMVLQGRDALVVMATGSGKSLCYQIPPLVTGKTAVVVSPLLSLM 180
           KYFG++ FRP Q+E+IE +++ RD LVVMATGSGKSLCYQ+PPLV  KT +VVSPL+SLM
Sbjct: 12  KYFGFSDFRPYQREVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVAKKTGIVVSPLISLM 71

Query: 181 QDQVMSLKQRGIKAEYLGSTQRDSTVYSNAESGRFDILYITPERACTLSRGFWSNLLQTG 360
           QDQVM+LKQRGIKAEYLGS Q+D TV+S AE G+FDIL++TPE+ACT+   FWSNLL+ G
Sbjct: 72  QDQVMALKQRGIKAEYLGSAQKDFTVHSKAEHGQFDILFMTPEKACTVPSSFWSNLLKAG 131

Query: 361 ICLLAVDEAHCISEWGHDFRKEYKQLDSLRG-LLDIPFIGLTATATEKVRRDIISSLKMK 537
           I L AVDEAHCISEWGHDFR EYK LD LR  LLD+PF+GLTATATEKVR DIISSLK+ 
Sbjct: 132 ISLFAVDEAHCISEWGHDFRVEYKHLDKLREVLLDVPFVGLTATATEKVRYDIISSLKLN 191

Query: 538 DPFISKGSFDRANLFYGV 591
           +P+++ GSFDR NLFYGV
Sbjct: 192 NPYVTIGSFDRTNLFYGV 209


>ref|XP_002526386.1| conserved hypothetical protein [Ricinus communis]
           gi|223534248|gb|EEF35962.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 795

 Score =  302 bits (773), Expect = 3e-80
 Identities = 143/198 (72%), Positives = 174/198 (87%), Gaps = 1/198 (0%)
 Frame = +1

Query: 1   KYFGYTSFRPLQKEIIEMVLQGRDALVVMATGSGKSLCYQIPPLVTGKTAVVVSPLLSLM 180
           KYFG++ FRP QKE+IE +L+ +D LVVMATGSGKSLCYQ+PPLV GKTAVV+SPL+SLM
Sbjct: 7   KYFGFSGFRPYQKEVIEKILERKDCLVVMATGSGKSLCYQVPPLVAGKTAVVISPLISLM 66

Query: 181 QDQVMSLKQRGIKAEYLGSTQRDSTVYSNAESGRFDILYITPERACTLSRGFWSNLLQTG 360
           QDQVM+LKQRGI+AEYLG+ Q D +V+++A++G F++L++TPE+AC+L   FWS+LL+ G
Sbjct: 67  QDQVMALKQRGIRAEYLGTGQTDHSVHNSAQNGHFNLLFVTPEKACSLPVSFWSSLLKVG 126

Query: 361 ICLLAVDEAHCISEWGHDFRKEYKQLDSLRG-LLDIPFIGLTATATEKVRRDIISSLKMK 537
           +CLLAVDEAHCISEWGHDFR EYKQL  LR  LLD+PF+GLTATAT KVR DII+SLKM 
Sbjct: 127 VCLLAVDEAHCISEWGHDFRVEYKQLYKLRNILLDVPFVGLTATATAKVRFDIINSLKMN 186

Query: 538 DPFISKGSFDRANLFYGV 591
           DP+IS GSFDR NLFYGV
Sbjct: 187 DPYISVGSFDRKNLFYGV 204


>ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis
           vinifera]
          Length = 913

 Score =  301 bits (770), Expect = 7e-80
 Identities = 141/198 (71%), Positives = 171/198 (86%), Gaps = 1/198 (0%)
 Frame = +1

Query: 1   KYFGYTSFRPLQKEIIEMVLQGRDALVVMATGSGKSLCYQIPPLVTGKTAVVVSPLLSLM 180
           +YFGY+ FRP QK+II+ +L+ RD+LV+MATGSGKSLCYQ+PPL+ GKTA+V+SPL+SLM
Sbjct: 7   RYFGYSGFRPYQKDIIQKILERRDSLVIMATGSGKSLCYQLPPLILGKTAIVISPLISLM 66

Query: 181 QDQVMSLKQRGIKAEYLGSTQRDSTVYSNAESGRFDILYITPERACTLSRGFWSNLLQTG 360
           QDQVM+LKQRGI+AE+L S Q D TV+ NAESG F +L++TPE+AC++   FWS LL+ G
Sbjct: 67  QDQVMALKQRGIRAEFLASAQTDPTVHKNAESGTFHVLFMTPEKACSIPGSFWSKLLKVG 126

Query: 361 ICLLAVDEAHCISEWGHDFRKEYKQLDSLRG-LLDIPFIGLTATATEKVRRDIISSLKMK 537
           ICL AVDEAHCISEWGHDFR EYKQLD LR  LLD+PF+GLTATAT+KVR DII+SLKM+
Sbjct: 127 ICLFAVDEAHCISEWGHDFRMEYKQLDKLRAILLDVPFVGLTATATKKVRMDIINSLKMR 186

Query: 538 DPFISKGSFDRANLFYGV 591
           DP +  GSFDR NLFYGV
Sbjct: 187 DPNVFIGSFDRKNLFYGV 204


>emb|CBI15784.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score =  301 bits (770), Expect = 7e-80
 Identities = 141/198 (71%), Positives = 171/198 (86%), Gaps = 1/198 (0%)
 Frame = +1

Query: 1   KYFGYTSFRPLQKEIIEMVLQGRDALVVMATGSGKSLCYQIPPLVTGKTAVVVSPLLSLM 180
           +YFGY+ FRP QK+II+ +L+ RD+LV+MATGSGKSLCYQ+PPL+ GKTA+V+SPL+SLM
Sbjct: 7   RYFGYSGFRPYQKDIIQKILERRDSLVIMATGSGKSLCYQLPPLILGKTAIVISPLISLM 66

Query: 181 QDQVMSLKQRGIKAEYLGSTQRDSTVYSNAESGRFDILYITPERACTLSRGFWSNLLQTG 360
           QDQVM+LKQRGI+AE+L S Q D TV+ NAESG F +L++TPE+AC++   FWS LL+ G
Sbjct: 67  QDQVMALKQRGIRAEFLASAQTDPTVHKNAESGTFHVLFMTPEKACSIPGSFWSKLLKVG 126

Query: 361 ICLLAVDEAHCISEWGHDFRKEYKQLDSLRG-LLDIPFIGLTATATEKVRRDIISSLKMK 537
           ICL AVDEAHCISEWGHDFR EYKQLD LR  LLD+PF+GLTATAT+KVR DII+SLKM+
Sbjct: 127 ICLFAVDEAHCISEWGHDFRMEYKQLDKLRAILLDVPFVGLTATATKKVRMDIINSLKMR 186

Query: 538 DPFISKGSFDRANLFYGV 591
           DP +  GSFDR NLFYGV
Sbjct: 187 DPNVFIGSFDRKNLFYGV 204


>emb|CAN79469.1| hypothetical protein VITISV_016935 [Vitis vinifera]
          Length = 447

 Score =  301 bits (770), Expect = 7e-80
 Identities = 141/198 (71%), Positives = 171/198 (86%), Gaps = 1/198 (0%)
 Frame = +1

Query: 1   KYFGYTSFRPLQKEIIEMVLQGRDALVVMATGSGKSLCYQIPPLVTGKTAVVVSPLLSLM 180
           +YFGY+ FRP QK+II+ +L+ RD+LV+MATGSGKSLCYQ+PPL+ GKTA+V+SPL+SLM
Sbjct: 7   RYFGYSGFRPYQKDIIQKILERRDSLVIMATGSGKSLCYQLPPLILGKTAIVISPLISLM 66

Query: 181 QDQVMSLKQRGIKAEYLGSTQRDSTVYSNAESGRFDILYITPERACTLSRGFWSNLLQTG 360
           QDQVM+LKQRGI+AE+L S Q D TV+ NAESG F +L++TPE+AC++   FWS LL+ G
Sbjct: 67  QDQVMALKQRGIRAEFLASAQTDPTVHKNAESGTFHVLFMTPEKACSIPGSFWSKLLKVG 126

Query: 361 ICLLAVDEAHCISEWGHDFRKEYKQLDSLRG-LLDIPFIGLTATATEKVRRDIISSLKMK 537
           ICL AVDEAHCISEWGHDFR EYKQLD LR  LLD+PF+GLTATAT+KVR DII+SLKM+
Sbjct: 127 ICLFAVDEAHCISEWGHDFRMEYKQLDKLRAILLDVPFVGLTATATKKVRMDIINSLKMR 186

Query: 538 DPFISKGSFDRANLFYGV 591
           DP +  GSFDR NLFYGV
Sbjct: 187 DPNVFIGSFDRKNLFYGV 204


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