BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005687
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23047.3| unnamed protein product [Vitis vinifera]              175   3e-42
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   169   3e-40
gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   154   5e-36
gb|AEZ00900.1| putative RNA recognition motif-containing protein...   144   1e-32
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...   140   8e-32

>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  175 bits (444), Expect = 3e-42
 Identities = 85/145 (58%), Positives = 106/145 (73%), Gaps = 3/145 (2%)
 Frame = +1

Query: 46  MGDAYWRYNEARQAP-LPPVALKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDNIG 222
           M D YWRY E RQ P +P ++ KR RSDYD+PGGH++PSY+SREDERA++R + ++D+IG
Sbjct: 1   MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 223 ASYDRYLRSGQIPTY-GESGRSLGGGMIGHPADDMRMSGVRGFDP-MXXXXXXXXXXXXX 396
           ASYDRYLR+ Q+P+Y G+SGR L GG+  HP DD R+ GVRG D                
Sbjct: 61  ASYDRYLRNAQMPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGR 120

Query: 397 PEIPLPADASNTLFVEGLPGNCTRR 471
           PE+PLP DAS+TLFVEGLP NCTRR
Sbjct: 121 PELPLPPDASSTLFVEGLPANCTRR 145


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  169 bits (427), Expect = 3e-40
 Identities = 84/145 (57%), Positives = 105/145 (72%), Gaps = 3/145 (2%)
 Frame = +1

Query: 46  MGDAYWRYNEARQAP-LPPVALKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDNIG 222
           M D YWRY E RQ P +P ++ KR RSDYD+PGGH++PSY+SREDERA++R + ++D+IG
Sbjct: 1   MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 223 ASYDRYLRSGQIPTY-GESGRSLGGGMIGHPADDMRMSGVRGFDP-MXXXXXXXXXXXXX 396
           ASYDRYLR+  +P+Y G+SGR L GG+  HP DD R+ GVRG D                
Sbjct: 61  ASYDRYLRNA-MPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGR 119

Query: 397 PEIPLPADASNTLFVEGLPGNCTRR 471
           PE+PLP DAS+TLFVEGLP NCTRR
Sbjct: 120 PELPLPPDASSTLFVEGLPANCTRR 144


>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  154 bits (390), Expect = 5e-36
 Identities = 78/148 (52%), Positives = 99/148 (66%), Gaps = 6/148 (4%)
 Frame = +1

Query: 46  MGDAYWRYNEARQAP---LPPVALKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDN 216
           M DAYWRY ++RQ P   L  +  KR+RSDYD+P GHE+PSY+SR+DER + R + +TD+
Sbjct: 1   MADAYWRYGDSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMRDTDS 60

Query: 217 IGASYDRYLRSGQIPTY--GESGRSLGGGMIGHPADDMRMSGVRGFDP-MXXXXXXXXXX 387
           IGASYDRYLRS Q+ +Y  G+S R + GGM     DD R+ G+   +P            
Sbjct: 61  IGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTLGYG 120

Query: 388 XXXPEIPLPADASNTLFVEGLPGNCTRR 471
              PE+PLP DAS+TLFVEGLP NCTRR
Sbjct: 121 GGRPEVPLPPDASSTLFVEGLPSNCTRR 148


>gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
           guineensis]
          Length = 294

 Score =  144 bits (362), Expect = 1e-32
 Identities = 81/165 (49%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
 Frame = +1

Query: 34  EK*RMGDAYWRYNEARQAPL----PPVALKRARSDY-DMPGGHEMPSYYSREDERASYRL 198
           E+ RM DAYWRY++ R        P   LKR R+DY D+PGG E+  YYSR++ER  +R 
Sbjct: 31  ERPRMADAYWRYSDPRHQAAAMAAPTAPLKRPRADYADIPGGPEVLGYYSRDEERTGHRT 90

Query: 199 VGETDNIGASYDRYLRSGQIPTYGESGRSLGGGMIGHPADDMRMSGVRGFD--------- 351
           + +T++I ASYDRYLR+G     GES R++ GGM GHP DD RM GV G D         
Sbjct: 91  IRDTESIAASYDRYLRNGVSFGAGESVRTVAGGMTGHPVDDRRMMGVGGMDGRTVGYGGG 150

Query: 352 ----PM-XXXXXXXXXXXXXPEIPLPADASNTLFVEGLPGNCTRR 471
               P+              PE PLP DASNTLFVEGLP NCTRR
Sbjct: 151 RPEPPLGGMDGRSVGYGGGRPEPPLPQDASNTLFVEGLPANCTRR 195


>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223545062|gb|EEF46575.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 232

 Score =  140 bits (354), Expect = 8e-32
 Identities = 73/148 (49%), Positives = 98/148 (66%), Gaps = 6/148 (4%)
 Frame = +1

Query: 46  MGDAYWRYNEARQA---PLPPVALKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDN 216
           M DAYWRY++ARQ    P+P +  KR+RSDYD+  GHE+P+YY+R+D+R + R + +TD+
Sbjct: 1   MADAYWRYSDARQPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIRDTDS 60

Query: 217 IGASYDRYLRSGQIPTY--GESGRSLGGGMIGHPADDMRMSGVRGFDP-MXXXXXXXXXX 387
           IGASYDRYLRS  I +Y  G+S R +  G+    ADD R+ G+ G DP            
Sbjct: 61  IGASYDRYLRSAPISSYSGGQSARPI-SGVPNRVADDPRIMGIGGLDPGPTVKDRTLGLG 119

Query: 388 XXXPEIPLPADASNTLFVEGLPGNCTRR 471
              PE  LP DA++TLFVEGLP +C+RR
Sbjct: 120 SGRPETSLPPDATSTLFVEGLPSDCSRR 147