BLASTX nr result

ID: Coptis24_contig00005678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005678
         (1984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264456.1| PREDICTED: uncharacterized protein LOC100241...   460   e-127
ref|XP_002302646.1| predicted protein [Populus trichocarpa] gi|2...   452   e-124
emb|CAN69136.1| hypothetical protein VITISV_019124 [Vitis vinifera]   450   e-124
emb|CBI23039.3| unnamed protein product [Vitis vinifera]              439   e-120
ref|XP_002271917.1| PREDICTED: uncharacterized protein LOC100245...   439   e-120

>ref|XP_002264456.1| PREDICTED: uncharacterized protein LOC100241604 [Vitis vinifera]
          Length = 753

 Score =  460 bits (1184), Expect = e-127
 Identities = 235/335 (70%), Positives = 263/335 (78%), Gaps = 4/335 (1%)
 Frame = +1

Query: 1    FSHNNYVTCIQFNPVDDNYFTSGSIDGKVRIWDVPGCRVVDWTDVKEIVTALCYRPDGKG 180
            FSHNNYVTC+QFNPVDDNYF SGSIDGKVRIW++PG +VVDWTD+ EIVTA+CYRPDGKG
Sbjct: 417  FSHNNYVTCVQFNPVDDNYFISGSIDGKVRIWEIPGGQVVDWTDITEIVTAVCYRPDGKG 476

Query: 181  AIVGSMGGNCRFYNVTDNHLLLDGQICIQGKKKSPGKRITGFQFSPSDPSKLMVTSADSQ 360
             IVGSM GNCRFY+ +D+ L L   IC+QGKKKS  KRITGFQFSPSDPSKLMVTSADSQ
Sbjct: 477  VIVGSMTGNCRFYDASDDRLQLHALICLQGKKKSSFKRITGFQFSPSDPSKLMVTSADSQ 536

Query: 361  VRILSGVDVICKYKGLRNAGSQISASFTVDGKHIVSASEDSNVYVWNYSCQDGPAPSKEK 540
            VRIL GVDVICKY+GLRNAGSQISASFT DG HIVSASEDSNVYVWN   QD P  S+ K
Sbjct: 537  VRILDGVDVICKYRGLRNAGSQISASFTSDGMHIVSASEDSNVYVWNCISQDVPVHSQAK 596

Query: 541  SIQSYERFFSDNVSVAVPWCGMRNKNSVGLRL-GTHLSHQISVASP-TDPINGWHHYHLS 714
            +  S ERFFS+N SVA+PWCG    NS+   + G   S ++SV  P +DP N  H  HL 
Sbjct: 597  NNWSCERFFSNNASVAIPWCGATCGNSIFSNISGAFPSPKLSVNLPRSDPENKPHQCHLG 656

Query: 715  ENSHNTIPLSPPDCLSLHQGFFSEALPKGSATWPEEK-LPSNSPSVSSVMCKTQYKFLKS 891
            E+S   +P S PD  S+  GFFSE+LPKGSATWPEEK L  +S  VSS MCK+QYKFLK+
Sbjct: 657  ESSSTILPFSSPDHFSVGHGFFSESLPKGSATWPEEKLLTPSSLVVSSAMCKSQYKFLKT 716

Query: 892  FYQSTSPS-HAWGHVIVTGGWDGRIRSFHNYGLPV 993
              QS   S HAWG VIVT GWDGRIRSF NYGLP+
Sbjct: 717  SCQSMFGSPHAWGLVIVTAGWDGRIRSFQNYGLPI 751


>ref|XP_002302646.1| predicted protein [Populus trichocarpa] gi|222844372|gb|EEE81919.1|
            predicted protein [Populus trichocarpa]
          Length = 744

 Score =  452 bits (1163), Expect = e-124
 Identities = 227/333 (68%), Positives = 255/333 (76%), Gaps = 1/333 (0%)
 Frame = +1

Query: 1    FSHNNYVTCIQFNPVDDNYFTSGSIDGKVRIWDVPGCRVVDWTDVKEIVTALCYRPDGKG 180
            F HN+YVTC+QFNPVD+NYF SGSIDGKVRIW +PGC+VVDWTD+ EIVTA+CY PDGKG
Sbjct: 412  FFHNDYVTCVQFNPVDENYFISGSIDGKVRIWAIPGCQVVDWTDITEIVTAVCYCPDGKG 471

Query: 181  AIVGSMGGNCRFYNVTDNHLLLDGQICIQGKKKSPGKRITGFQFSPSDPSKLMVTSADSQ 360
             IVGSM GNCRFY+  DN L    QIC+QGKKKSP KRITGFQFSPSDP++LMVTSADSQ
Sbjct: 472  GIVGSMNGNCRFYDAADNRLQQYAQICLQGKKKSPFKRITGFQFSPSDPTRLMVTSADSQ 531

Query: 361  VRILSGVDVICKYKGLRNAGSQISASFTVDGKHIVSASEDSNVYVWNYSCQDGPAPSKEK 540
            VRIL GVDVICKY+GLRNAGSQISASFT DG HIVSASEDS VY+WN   QDGP   ++K
Sbjct: 532  VRILHGVDVICKYRGLRNAGSQISASFTSDGMHIVSASEDSYVYIWNNISQDGPVAQEKK 591

Query: 541  SIQSYERFFSDNVSVAVPWCGMRNKNSVGLRLGTHLSHQISVASPTDPINGWHHYHLSEN 720
            S  S ERFFS+NVSVA+PWCGM + N     + T  S     + P    +      L E+
Sbjct: 592  SKWSCERFFSNNVSVAIPWCGMTSMNCSSSTV-TRKSPSSINSGPCSEKSVLLQSELVES 650

Query: 721  SHNTIPLSPPDCLSLHQGFFSEALPKGSATWPEEKLPSNSPSVSSVMCKTQYKFLKSFYQ 900
            S   +P S P+ LSL  GFFS +LPKGSATWPEE LP++S  VSS MCK+QYKFLK   Q
Sbjct: 651  SQWKLPFSSPENLSLSHGFFSHSLPKGSATWPEENLPASSLVVSSAMCKSQYKFLKMSCQ 710

Query: 901  STSPS-HAWGHVIVTGGWDGRIRSFHNYGLPVH 996
            S   S HAWG VIVT GWDGRIRSF NYGLPVH
Sbjct: 711  SMHGSPHAWGLVIVTAGWDGRIRSFQNYGLPVH 743


>emb|CAN69136.1| hypothetical protein VITISV_019124 [Vitis vinifera]
          Length = 717

 Score =  450 bits (1158), Expect = e-124
 Identities = 234/347 (67%), Positives = 262/347 (75%), Gaps = 16/347 (4%)
 Frame = +1

Query: 1    FSHNNYVTCIQFNPVDDNYFTSGSIDGKVRIWDVPGCRVVDWTDVKEIVTALCYRPDGK- 177
            FSHNNYVTC+QFNPVDDNYF SGSIDGKVRIW++PG +VVDWTD+ EIVTA+CYRPDGK 
Sbjct: 369  FSHNNYVTCVQFNPVDDNYFISGSIDGKVRIWEIPGGQVVDWTDITEIVTAVCYRPDGKV 428

Query: 178  -----------GAIVGSMGGNCRFYNVTDNHLLLDGQICIQGKKKSPGKRITGFQFSPSD 324
                       G IVGSM GNCRFY+ +D+ L L   IC+QGKKKS  KRITGFQFSPSD
Sbjct: 429  GVFLCCLFVEMGXIVGSMTGNCRFYDASDBRLQLHALICLQGKKKSXFKRITGFQFSPSD 488

Query: 325  PSKLMVTSADSQVRILSGVDVICKYKGLRNAGSQISASFTVDGKHIVSASEDSNVYVWNY 504
            PSKLMVTSADSQVRIL GVDVICKY+GLRNAGSQISASFT DG HIVSASEDSNVYVWN 
Sbjct: 489  PSKLMVTSADSQVRILDGVDVICKYRGLRNAGSQISASFTSDGMHIVSASEDSNVYVWNC 548

Query: 505  SCQDGPAPSKEKSIQSYERFFSDNVSVAVPWCGMRNKNSVGLRL-GTHLSHQISVASP-T 678
              QD P  S+ K+  S ERFFS+N SVA+PWCG    NS+   + G   S ++SV  P +
Sbjct: 549  ISQDVPVHSQAKNNWSCERFFSNNASVAIPWCGATCGNSIFSNISGAFPSPKLSVNLPRS 608

Query: 679  DPINGWHHYHLSENSHNTIPLSPPDCLSLHQGFFSEALPKGSATWPEEK-LPSNSPSVSS 855
            DP N  H  HL E+S   +P S PD  S+  GFFSE+LPKGSATWPEEK L  +S  VSS
Sbjct: 609  DPENKPHQCHLGESSSTILPFSSPDHFSVGHGFFSESLPKGSATWPEEKLLTPSSLVVSS 668

Query: 856  VMCKTQYKFLKSFYQSTSPS-HAWGHVIVTGGWDGRIRSFHNYGLPV 993
             MCK+QYKF K+  QS   S HAWG VIVT GWDGRIRSF NYGLP+
Sbjct: 669  AMCKSQYKFXKTSCQSMFGSPHAWGLVIVTAGWDGRIRSFQNYGLPI 715


>emb|CBI23039.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score =  439 bits (1130), Expect = e-120
 Identities = 219/331 (66%), Positives = 255/331 (77%), Gaps = 1/331 (0%)
 Frame = +1

Query: 1    FSHNNYVTCIQFNPVDDNYFTSGSIDGKVRIWDVPGCRVVDWTDVKEIVTALCYRPDGKG 180
            FSHNNYVTC+QFNPVDDNYF SGSIDGKVRIW +PGC+VVDWTD++E+VTA+CYRPDG+G
Sbjct: 364  FSHNNYVTCVQFNPVDDNYFISGSIDGKVRIWAIPGCQVVDWTDIREMVTAVCYRPDGQG 423

Query: 181  AIVGSMGGNCRFYNVTDNHLLLDGQICIQGKKKSPGKRITGFQFSPSDPSKLMVTSADSQ 360
             IVGSM G CRFYNV+DNHL L+ Q+C+ GKKKS  KRITGFQFSP DPS +MVT ADSQ
Sbjct: 424  GIVGSMTGTCRFYNVSDNHLQLESQMCLHGKKKSLCKRITGFQFSPQDPSTVMVTCADSQ 483

Query: 361  VRILSGVDVICKYKGLRNAGSQISASFTVDGKHIVSASEDSNVYVWNYSCQDGPAPSKEK 540
            VRIL G +VI KYKGLRNAG+Q+SASFT DGKHIVSA +DSNVYVWN S +  PA S+ K
Sbjct: 484  VRILHGTNVIGKYKGLRNAGNQMSASFTSDGKHIVSACDDSNVYVWNCSNEGEPALSQSK 543

Query: 541  SIQSYERFFSDNVSVAVPWCGMRNKNSVGLRLGTHLSHQISVASPTDPINGWHHYHLSEN 720
            SI+++E F + N SVA+PWCGM+  N                     P NGW  + L E+
Sbjct: 544  SIRAFEHFLT-NASVAIPWCGMKYGN---------------------PENGWQFHALDES 581

Query: 721  SHNTIPLSPPDCLSLHQGFFSEALPKGSATWPEEKLPSNS-PSVSSVMCKTQYKFLKSFY 897
            S NT+P   P   SL Q FFSE+ PKGSATWPEEKLP++S  SV S + K+++KFLK+  
Sbjct: 582  SPNTLPFPSPASFSLSQEFFSESFPKGSATWPEEKLPTSSLVSVPSKIHKSEHKFLKA-C 640

Query: 898  QSTSPSHAWGHVIVTGGWDGRIRSFHNYGLP 990
            QSTS SHAWG VIVT GWDGRIRSFHNYGLP
Sbjct: 641  QSTSSSHAWGLVIVTAGWDGRIRSFHNYGLP 671


>ref|XP_002271917.1| PREDICTED: uncharacterized protein LOC100245187 [Vitis vinifera]
          Length = 731

 Score =  439 bits (1130), Expect = e-120
 Identities = 219/331 (66%), Positives = 255/331 (77%), Gaps = 1/331 (0%)
 Frame = +1

Query: 1    FSHNNYVTCIQFNPVDDNYFTSGSIDGKVRIWDVPGCRVVDWTDVKEIVTALCYRPDGKG 180
            FSHNNYVTC+QFNPVDDNYF SGSIDGKVRIW +PGC+VVDWTD++E+VTA+CYRPDG+G
Sbjct: 421  FSHNNYVTCVQFNPVDDNYFISGSIDGKVRIWAIPGCQVVDWTDIREMVTAVCYRPDGQG 480

Query: 181  AIVGSMGGNCRFYNVTDNHLLLDGQICIQGKKKSPGKRITGFQFSPSDPSKLMVTSADSQ 360
             IVGSM G CRFYNV+DNHL L+ Q+C+ GKKKS  KRITGFQFSP DPS +MVT ADSQ
Sbjct: 481  GIVGSMTGTCRFYNVSDNHLQLESQMCLHGKKKSLCKRITGFQFSPQDPSTVMVTCADSQ 540

Query: 361  VRILSGVDVICKYKGLRNAGSQISASFTVDGKHIVSASEDSNVYVWNYSCQDGPAPSKEK 540
            VRIL G +VI KYKGLRNAG+Q+SASFT DGKHIVSA +DSNVYVWN S +  PA S+ K
Sbjct: 541  VRILHGTNVIGKYKGLRNAGNQMSASFTSDGKHIVSACDDSNVYVWNCSNEGEPALSQSK 600

Query: 541  SIQSYERFFSDNVSVAVPWCGMRNKNSVGLRLGTHLSHQISVASPTDPINGWHHYHLSEN 720
            SI+++E F + N SVA+PWCGM+  N                     P NGW  + L E+
Sbjct: 601  SIRAFEHFLT-NASVAIPWCGMKYGN---------------------PENGWQFHALDES 638

Query: 721  SHNTIPLSPPDCLSLHQGFFSEALPKGSATWPEEKLPSNS-PSVSSVMCKTQYKFLKSFY 897
            S NT+P   P   SL Q FFSE+ PKGSATWPEEKLP++S  SV S + K+++KFLK+  
Sbjct: 639  SPNTLPFPSPASFSLSQEFFSESFPKGSATWPEEKLPTSSLVSVPSKIHKSEHKFLKA-C 697

Query: 898  QSTSPSHAWGHVIVTGGWDGRIRSFHNYGLP 990
            QSTS SHAWG VIVT GWDGRIRSFHNYGLP
Sbjct: 698  QSTSSSHAWGLVIVTAGWDGRIRSFHNYGLP 728


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