BLASTX nr result

ID: Coptis24_contig00005638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005638
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524031.1| 30S ribosomal protein S5, putative [Ricinus ...   306   3e-81
ref|XP_004151847.1| PREDICTED: uncharacterized protein LOC101205...   305   6e-81
emb|CBI21991.3| unnamed protein product [Vitis vinifera]              304   1e-80
ref|XP_002276769.1| PREDICTED: uncharacterized protein LOC100267...   304   1e-80
ref|XP_002319240.1| predicted protein [Populus trichocarpa] gi|2...   301   5e-80

>ref|XP_002524031.1| 30S ribosomal protein S5, putative [Ricinus communis]
           gi|223536758|gb|EEF38399.1| 30S ribosomal protein S5,
           putative [Ricinus communis]
          Length = 502

 Score =  306 bits (783), Expect = 3e-81
 Identities = 148/184 (80%), Positives = 164/184 (89%)
 Frame = -2

Query: 636 EEEIKDLADERNALTEAKTRPLYRKGFKERLITVNRTCKVTKGGQVASFTALVACGNLHG 457
           EEEI+DLA+ERN+LTE K RP+YRKGF  +LI VNRTCKVTKGGQV  +TA++ACGN HG
Sbjct: 319 EEEIRDLAEERNSLTEKKRRPMYRKGFDVKLIDVNRTCKVTKGGQVVKYTAILACGNYHG 378

Query: 456 VVGFARAKGPKVPIALQKARVKCFQNLHYVELHEEHTIAHAVQSNYKKTKVYLWPASTRT 277
           VVGFA+AKGP VP+ALQKA  KCFQNLHYVE HEEHTIAHA+Q+ YKKTKVYLWPASTRT
Sbjct: 379 VVGFAKAKGPAVPVALQKAYEKCFQNLHYVERHEEHTIAHAIQTTYKKTKVYLWPASTRT 438

Query: 276 GMIAGKTVKCILKLAGFKNIKSKVIGSRNPLNTVKAVFKALNAIETPKDVQEKFGRTVVE 97
           GM AG+ V+ IL LAGFKN+KSKVIGSRNP NTVKAVF ALN+IETPKDVQEKFGRTVVE
Sbjct: 439 GMKAGRIVQTILNLAGFKNVKSKVIGSRNPHNTVKAVFNALNSIETPKDVQEKFGRTVVE 498

Query: 96  SYLL 85
            YLL
Sbjct: 499 KYLL 502


>ref|XP_004151847.1| PREDICTED: uncharacterized protein LOC101205390 [Cucumis sativus]
           gi|449524434|ref|XP_004169228.1| PREDICTED:
           uncharacterized LOC101205390 [Cucumis sativus]
          Length = 500

 Score =  305 bits (780), Expect = 6e-81
 Identities = 146/184 (79%), Positives = 165/184 (89%)
 Frame = -2

Query: 636 EEEIKDLADERNALTEAKTRPLYRKGFKERLITVNRTCKVTKGGQVASFTALVACGNLHG 457
           EEEI+DLA+ERN+LTE K RPLYRKGF  +LI VNRTCKVTKGG+V  +TA++ACGN HG
Sbjct: 317 EEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHG 376

Query: 456 VVGFARAKGPKVPIALQKARVKCFQNLHYVELHEEHTIAHAVQSNYKKTKVYLWPASTRT 277
           +VG+A AKGP VPIALQKA  KCFQNLHYVE HEEHTIAHAVQ+ YKKTK+YLWPAST T
Sbjct: 377 IVGYATAKGPAVPIALQKAYEKCFQNLHYVERHEEHTIAHAVQTAYKKTKIYLWPASTTT 436

Query: 276 GMIAGKTVKCILKLAGFKNIKSKVIGSRNPLNTVKAVFKALNAIETPKDVQEKFGRTVVE 97
           GM AGKTV+ +L LAGFKN+KSKVIGSRNPLNT++A+FKALNAIETPKD+QEKFGRTVVE
Sbjct: 437 GMKAGKTVQTVLNLAGFKNVKSKVIGSRNPLNTMRALFKALNAIETPKDIQEKFGRTVVE 496

Query: 96  SYLL 85
            YLL
Sbjct: 497 KYLL 500


>emb|CBI21991.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score =  304 bits (778), Expect = 1e-80
 Identities = 148/184 (80%), Positives = 164/184 (89%)
 Frame = -2

Query: 636 EEEIKDLADERNALTEAKTRPLYRKGFKERLITVNRTCKVTKGGQVASFTALVACGNLHG 457
           EEEI+DLA+ERN+LTE K RPLYRKGF  +LI VNRTCKVTKGGQV  +TA++ACGN HG
Sbjct: 221 EEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYTAILACGNYHG 280

Query: 456 VVGFARAKGPKVPIALQKARVKCFQNLHYVELHEEHTIAHAVQSNYKKTKVYLWPASTRT 277
           VVG+A+AKGP +PIALQKA  KCFQNLHYVE +EEHTIAHAVQ+ YKKTKVYLWPA T T
Sbjct: 281 VVGYAKAKGPAIPIALQKAYEKCFQNLHYVERYEEHTIAHAVQTTYKKTKVYLWPAQTTT 340

Query: 276 GMIAGKTVKCILKLAGFKNIKSKVIGSRNPLNTVKAVFKALNAIETPKDVQEKFGRTVVE 97
           GM AG+TV+ IL LAGFKN+KSKVIGSRNP NTVKA+FKALNAIETPKDVQEKFGRTVVE
Sbjct: 341 GMKAGRTVQTILNLAGFKNVKSKVIGSRNPHNTVKALFKALNAIETPKDVQEKFGRTVVE 400

Query: 96  SYLL 85
            YLL
Sbjct: 401 KYLL 404


>ref|XP_002276769.1| PREDICTED: uncharacterized protein LOC100267778 [Vitis vinifera]
          Length = 499

 Score =  304 bits (778), Expect = 1e-80
 Identities = 148/184 (80%), Positives = 164/184 (89%)
 Frame = -2

Query: 636 EEEIKDLADERNALTEAKTRPLYRKGFKERLITVNRTCKVTKGGQVASFTALVACGNLHG 457
           EEEI+DLA+ERN+LTE K RPLYRKGF  +LI VNRTCKVTKGGQV  +TA++ACGN HG
Sbjct: 316 EEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQVVKYTAILACGNYHG 375

Query: 456 VVGFARAKGPKVPIALQKARVKCFQNLHYVELHEEHTIAHAVQSNYKKTKVYLWPASTRT 277
           VVG+A+AKGP +PIALQKA  KCFQNLHYVE +EEHTIAHAVQ+ YKKTKVYLWPA T T
Sbjct: 376 VVGYAKAKGPAIPIALQKAYEKCFQNLHYVERYEEHTIAHAVQTTYKKTKVYLWPAQTTT 435

Query: 276 GMIAGKTVKCILKLAGFKNIKSKVIGSRNPLNTVKAVFKALNAIETPKDVQEKFGRTVVE 97
           GM AG+TV+ IL LAGFKN+KSKVIGSRNP NTVKA+FKALNAIETPKDVQEKFGRTVVE
Sbjct: 436 GMKAGRTVQTILNLAGFKNVKSKVIGSRNPHNTVKALFKALNAIETPKDVQEKFGRTVVE 495

Query: 96  SYLL 85
            YLL
Sbjct: 496 KYLL 499


>ref|XP_002319240.1| predicted protein [Populus trichocarpa] gi|222857616|gb|EEE95163.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  301 bits (772), Expect = 5e-80
 Identities = 142/184 (77%), Positives = 167/184 (90%)
 Frame = -2

Query: 636 EEEIKDLADERNALTEAKTRPLYRKGFKERLITVNRTCKVTKGGQVASFTALVACGNLHG 457
           EEEI++LA++RN+LTE K RP+YRKGF +R+I VNRTCKVTKGG+V  +TA++ACGN HG
Sbjct: 335 EEEIRNLAEQRNSLTEKKRRPMYRKGFDDRVINVNRTCKVTKGGRVVKYTAMLACGNYHG 394

Query: 456 VVGFARAKGPKVPIALQKARVKCFQNLHYVELHEEHTIAHAVQSNYKKTKVYLWPASTRT 277
           V+GFA+AKGP+V +A+QKAR KCFQNLHY+E HEEHTIA+AVQ+ YKKTK+YLWPA TRT
Sbjct: 395 VIGFAKAKGPRVHVAIQKAREKCFQNLHYIERHEEHTIANAVQTQYKKTKLYLWPAPTRT 454

Query: 276 GMIAGKTVKCILKLAGFKNIKSKVIGSRNPLNTVKAVFKALNAIETPKDVQEKFGRTVVE 97
           GM AGKTVK IL LAGFKN+KSKVIGSRNP NTV+A+FKALNAIETPKDVQEKFGRTVVE
Sbjct: 455 GMKAGKTVKAILNLAGFKNVKSKVIGSRNPYNTVRALFKALNAIETPKDVQEKFGRTVVE 514

Query: 96  SYLL 85
            +LL
Sbjct: 515 KHLL 518


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