BLASTX nr result

ID: Coptis24_contig00005631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005631
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518548.1| PREDICTED: meiotic recombination protein SPO...    64   2e-08
ref|XP_002522761.1| meiotic recombination protein spo11, putativ...    61   8e-08
emb|CBI39720.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_002264649.1| PREDICTED: meiotic recombination protein SPO...    60   1e-07
ref|XP_002300376.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>ref|XP_003518548.1| PREDICTED: meiotic recombination protein SPO11-1-like [Glycine max]
          Length = 367

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = -2

Query: 244 LVMGWLRFSESERKFDCLKKPSTAHPIPVHVEDIKGI 134
           L+MGW+RFSE ER FDC+  P+TAHP+PVHVE+++ I
Sbjct: 148 LIMGWIRFSEGERIFDCISSPNTAHPVPVHVEEVQDI 184


>ref|XP_002522761.1| meiotic recombination protein spo11, putative [Ricinus communis]
           gi|223537999|gb|EEF39612.1| meiotic recombination
           protein spo11, putative [Ricinus communis]
          Length = 373

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -2

Query: 244 LVMGWLRFSESERKFDCLKKPSTAHPIPVHVEDIKGI 134
           LVMGWLRF E+ RKFDC+  P+  HPIP+HVE++K I
Sbjct: 142 LVMGWLRFLEAGRKFDCINSPNNVHPIPIHVEEVKDI 178


>emb|CBI39720.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = -2

Query: 244 LVMGWLRFSESERKFDCLKKPSTAHPIPVHVEDIKGI 134
           LVMGWLRF E+ +KFDC+  P+TA+P+PVHVE++K I
Sbjct: 196 LVMGWLRFLEAGKKFDCINGPNTAYPVPVHVEEVKDI 232


>ref|XP_002264649.1| PREDICTED: meiotic recombination protein SPO11-1-like [Vitis
           vinifera]
          Length = 361

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = -2

Query: 244 LVMGWLRFSESERKFDCLKKPSTAHPIPVHVEDIKGI 134
           LVMGWLRF E+ +KFDC+  P+TA+P+PVHVE++K I
Sbjct: 142 LVMGWLRFLEAGKKFDCINGPNTAYPVPVHVEEVKDI 178


>ref|XP_002300376.1| predicted protein [Populus trichocarpa] gi|222847634|gb|EEE85181.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = -2

Query: 244 LVMGWLRFSESERKFDCLKKPSTAHPIPVHVEDIKGI 134
           LVMGWL+F E+ RKFDC+  P+TA+ IPVHVE++K I
Sbjct: 139 LVMGWLQFLEAGRKFDCISSPTTAYTIPVHVEEVKDI 175


Top