BLASTX nr result

ID: Coptis24_contig00005610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005610
         (2014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273502.1| PREDICTED: GATA transcription factor 9-like ...   237   8e-60
ref|XP_002534043.1| GATA transcription factor, putative [Ricinus...   219   2e-54
ref|XP_003536350.1| PREDICTED: GATA transcription factor 9-like ...   211   6e-52
ref|XP_003556234.1| PREDICTED: GATA transcription factor 9-like ...   209   3e-51
ref|XP_002311088.1| predicted protein [Populus trichocarpa] gi|2...   209   3e-51

>ref|XP_002273502.1| PREDICTED: GATA transcription factor 9-like [Vitis vinifera]
          Length = 340

 Score =  237 bits (605), Expect = 8e-60
 Identities = 148/347 (42%), Positives = 180/347 (51%), Gaps = 6/347 (1%)
 Frame = -3

Query: 1559 GHGCMDDKDMNLDFCGXXXXXXXXXXXFPAEDIQGGGDILVGGDCVVSHNTNGGFHGVWQ 1380
            G   MD+ D     CG           FP ED+ GG   L+GGDC         F  +W 
Sbjct: 3    GPNFMDEID-----CGSFFDHIDDLLEFPPEDVSGG---LMGGDC-------NSFPSIWT 47

Query: 1379 --SPPVDACSPLFSNPNNHSA--FPTDLSVPDEDIAQLEWLSTFVEDSFSAGTITLNEDF 1212
              S P+     +FS PN++S      +LSVP EDI QLEWLS FVEDSFS G+I LN++ 
Sbjct: 48   NASDPLPGPDSVFSGPNSNSNSDLSAELSVPYEDIVQLEWLSNFVEDSFSGGSIGLNKE- 106

Query: 1211 VRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHQFRTXXXXXXXXXXXXXSGG--RT 1038
                                               HQF+T             SGG  +T
Sbjct: 107  -------------------------DGSIVKDSPHHQFQTSSPVSVLESSSSCSGGGGKT 141

Query: 1037 MLISPETVVPGRARSKRPRPTTFNSRXXXXXXXXXXXXXXXXXXXXXIELVSESDNFAES 858
            + +SP      RARSKRPRP TFN R                      +  S+S+N+AES
Sbjct: 142  IPLSPNHRGAQRARSKRPRPATFNPRPAIQLISPTSSVTESPQPVLVPKASSDSENYAES 201

Query: 857  NLSTKFAEPFSTDXXXXXXXKLSPNSSSIDQSMSAHPMAIRKCLHCEITKTPQWRAGPLG 678
            +   K  +P + +       KLS     ++ + +    A+RKC+HCEITKTPQWRAGP+G
Sbjct: 202  SPLKKMPKPAAAEHKKKKKMKLSLPLGPVEMNQNPPAQAVRKCMHCEITKTPQWRAGPMG 261

Query: 677  PKTLCNACGVRYKSGRLFPEYRPAASPTFVPKLHSNSHKKVLEMRNK 537
            PKTLCNACGVRYKSGRLFPEYRPAASPTFVP LHSNSHKKV+EMRNK
Sbjct: 262  PKTLCNACGVRYKSGRLFPEYRPAASPTFVPALHSNSHKKVIEMRNK 308


>ref|XP_002534043.1| GATA transcription factor, putative [Ricinus communis]
            gi|223525941|gb|EEF28339.1| GATA transcription factor,
            putative [Ricinus communis]
          Length = 359

 Score =  219 bits (558), Expect = 2e-54
 Identities = 140/320 (43%), Positives = 165/320 (51%), Gaps = 17/320 (5%)
 Frame = -3

Query: 1430 DCVVSHNTNGG---FHGVW--QSPPVDACSPLFS-NPNNHSA--FPTDLSVPDEDIAQLE 1275
            DC  + N NG    F  +W  QS  +     +FS N NN+SA     +LSVP EDI QLE
Sbjct: 37   DCTNAVNVNGNVNSFPSIWSTQSDSLPGSHSVFSSNTNNNSASDLSAELSVPYEDIVQLE 96

Query: 1274 WLSTFVEDSFSAGTITLNEDFVRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHQFR 1095
            WLS FVEDSFS G++T+N++                                    HQF+
Sbjct: 97   WLSNFVEDSFSGGSLTMNKE------------------------ESTSINKDSSHHHQFQ 132

Query: 1094 TXXXXXXXXXXXXXSGGRTMLISPETVVPGR---ARSKRPRPTTFNSRXXXXXXXXXXXX 924
            T             SG +T+  SPE +  GR   ARSKRPRP TF  R            
Sbjct: 133  TSSPVSVLESSSSCSGEKTVPRSPEIIASGRRGRARSKRPRPATFTPRPAMQLISPSSSA 192

Query: 923  XXXXXXXXXI-ELVSESDNFAESNLSTKFAEP-----FSTDXXXXXXXKLSPNSSSIDQS 762
                     + +  S+S+N+AES L  K                     L    +S D S
Sbjct: 193  TETPHQPFVVPKAPSDSENYAESRLLIKLPNKQVVPEHKKKKKIKFTVPLGSAETSHDSS 252

Query: 761  MSAHPMAIRKCLHCEITKTPQWRAGPLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPK 582
                  A+RKC+HCEITKTPQWRAGP+GPKTLCNACGVRYKSGRLFPEYRPAASPTFVP 
Sbjct: 253  PPPQQQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPS 312

Query: 581  LHSNSHKKVLEMRNKTDFEL 522
            LHSNSHKKVLEMRNK   +L
Sbjct: 313  LHSNSHKKVLEMRNKVGDKL 332


>ref|XP_003536350.1| PREDICTED: GATA transcription factor 9-like [Glycine max]
          Length = 347

 Score =  211 bits (537), Expect = 6e-52
 Identities = 150/370 (40%), Positives = 181/370 (48%), Gaps = 22/370 (5%)
 Frame = -3

Query: 1559 GHGCMDDKDMNLDFCGXXXXXXXXXXXFPAEDIQGGGDILVGGDCVVSHNTNGGFHGVW- 1383
            G   MD+ D     CG           FP ED+ GG   L      VS   +     +W 
Sbjct: 3    GPNFMDEID-----CGSFFDHIDDLLDFPVEDVDGGAATLPS----VSAGNSNSLASIWP 53

Query: 1382 -QSPPVDACSPLFSNPNNHSAFPTDLSVPDEDIAQLEWLSTFVEDSFSAGTITLN----- 1221
             +S    A   +FS  N+ S    +LSVP EDI QLEWLS FVEDSF  G++T+N     
Sbjct: 54   SESDSFPASDSVFSG-NSASDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKVEEP 112

Query: 1220 -----EDFVRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHQFRTXXXXXXXXXXXX 1056
                 ED V T                                 QF T            
Sbjct: 113  SCTTKEDSVNT---------------------------------QFHTSSPVSVLESSSS 139

Query: 1055 XSGGRTMLI-SPETVVP---GRARSKRPRPTTFNSRXXXXXXXXXXXXXXXXXXXXXI-- 894
             SGG+T+   SPE  +P   GRARSKRPRP TFN R                     I  
Sbjct: 140  CSGGKTLPPRSPEIYIPVPCGRARSKRPRPATFNPRPAMNLISPASSFVGENMQPNVISS 199

Query: 893  ELVSESDNFAESNLSTKFAEPFSTDXXXXXXXKLSPNSSSIDQSMSAHPMAIRKCLHCEI 714
            +  S+S+NFAES L  K  +  S +       K+    +  D + +A    +RKC+HCEI
Sbjct: 200  KASSDSENFAESQLVPKMPKLASGEPKKKKKVKVPLPVAPADNNQNAS-QPVRKCMHCEI 258

Query: 713  TKTPQWRAGPLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPKLHSNSHKKVLEMR--- 543
            TKTPQWRAGP+GPKTLCNACGVRYKSGRLFPEYRPAASPTF P +HSNSHKKVLEMR   
Sbjct: 259  TKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPSVHSNSHKKVLEMRCRG 318

Query: 542  -NKTDFELSS 516
             +K+ F ++S
Sbjct: 319  FDKSGFAINS 328


>ref|XP_003556234.1| PREDICTED: GATA transcription factor 9-like [Glycine max]
          Length = 348

 Score =  209 bits (531), Expect = 3e-51
 Identities = 150/370 (40%), Positives = 174/370 (47%), Gaps = 22/370 (5%)
 Frame = -3

Query: 1559 GHGCMDDKDMNLDFCGXXXXXXXXXXXFPAEDIQGGGDILVGGDCVVSHNTNGGFHGVW- 1383
            G   MD+ D     CG           FP ED+ GG   L     V +         +W 
Sbjct: 3    GPNFMDEID-----CGSFFDHIDDLLDFPVEDVDGGAATLPS---VAAAGNCNSLASIWP 54

Query: 1382 -QSPPVDACSPLFSNPNNHSAFPTDLSVPDEDIAQLEWLSTFVEDSFSAGTITLN----- 1221
             +S        +FS  N  S    +LSVP EDI QLEWLS FVEDSF  G++T+N     
Sbjct: 55   AESDSFPTSDSVFSG-NTASDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKVEEP 113

Query: 1220 -----EDFVRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHQFRTXXXXXXXXXXXX 1056
                 ED V T                                 QF T            
Sbjct: 114  SCTTKEDSVNT---------------------------------QFHTSSPVSVLESSSS 140

Query: 1055 XSGGRTM-LISPETVVP---GRARSKRPRPTTFNSRXXXXXXXXXXXXXXXXXXXXXIEL 888
             SGG+T  L SPE  +P   GR RSKRPRP TFN R                     I  
Sbjct: 141  CSGGKTFPLSSPEIYIPVPCGRTRSKRPRPATFNPRPAMNLISPASSFVGENMQPNVISS 200

Query: 887  VSESD--NFAESNLSTKFAEPFSTDXXXXXXXKLSPNSSSIDQSMSAHPMAIRKCLHCEI 714
             S SD  NFAES L  K  +  S +       KL       D + +A    +RKC+HCEI
Sbjct: 201  KSSSDSENFAESQLVPKMPKQASEEPKKKKKVKLPLPLVPADNNQNAS-QPVRKCMHCEI 259

Query: 713  TKTPQWRAGPLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPKLHSNSHKKVLEMR--- 543
            TKTPQWRAGP+GPKTLCNACGVRYKSGRLFPEYRPAASPTF P +HSNSHKKVLEMR   
Sbjct: 260  TKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPSVHSNSHKKVLEMRCRG 319

Query: 542  -NKTDFELSS 516
             +K+ F ++S
Sbjct: 320  IDKSGFAINS 329


>ref|XP_002311088.1| predicted protein [Populus trichocarpa] gi|222850908|gb|EEE88455.1|
            predicted protein [Populus trichocarpa]
          Length = 354

 Score =  209 bits (531), Expect = 3e-51
 Identities = 124/298 (41%), Positives = 154/298 (51%), Gaps = 4/298 (1%)
 Frame = -3

Query: 1415 HNTNGGFHGVWQSPPVDACSPLFSNPNNHSAFPTDLSVPDEDIAQLEWLSTFVEDSFSAG 1236
            +N +  F G+W +          S P + S    +LSVP EDI QLEWLS FVEDSFS G
Sbjct: 54   NNDDNSFPGIWSTQSD-------SLPGSASDLSAELSVPYEDIVQLEWLSNFVEDSFSGG 106

Query: 1235 TITLNEDFVRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHQFRTXXXXXXXXXXXX 1056
            ++T+ ++                                    +QF+T            
Sbjct: 107  SLTMKKE---------------------ESTIVNNKESPPHHQYQFQTSSPVSVLESSSS 145

Query: 1055 XSGGRTMLISPETVVPG---RARSKRPRPTTFNSRXXXXXXXXXXXXXXXXXXXXXIELV 885
             SG +T   SPE    G   RARSKRPRP TF  R                      ++ 
Sbjct: 146  CSGEKTAPRSPEVGASGKRGRARSKRPRPATFTPRPAMQLISPTSSITEVPQPFVPPKIA 205

Query: 884  SESDNFAESNLSTKFAEPFSTDXXXXXXXKLSPNSSSIDQSMSAHPM-AIRKCLHCEITK 708
             +S+NFAES L  K       +       K +     ++ + ++ P  A+RKC+HCEITK
Sbjct: 206  LDSENFAESRLVIKIPNHVDPEHKKKKKIKFTVPLGPVEMNQNSSPQQAVRKCMHCEITK 265

Query: 707  TPQWRAGPLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPKLHSNSHKKVLEMRNKT 534
            TPQWRAGP+GPKTLCNACGVRYKSGRLFPEYRPAASPTFVP LHSNSHKKV+EMR K+
Sbjct: 266  TPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPSLHSNSHKKVVEMRAKS 323


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