BLASTX nr result

ID: Coptis24_contig00005608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005608
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619546.1| Alkylated DNA repair protein alkB-like prote...   298   2e-78
ref|XP_002265373.1| PREDICTED: probable alpha-ketoglutarate-depe...   297   3e-78
ref|XP_003548257.1| PREDICTED: probable alpha-ketoglutarate-depe...   289   6e-76
gb|AFK37545.1| unknown [Lotus japonicus]                              289   7e-76
ref|XP_002319446.1| predicted protein [Populus trichocarpa] gi|2...   289   7e-76

>ref|XP_003619546.1| Alkylated DNA repair protein alkB-like protein [Medicago
           truncatula] gi|355494561|gb|AES75764.1| Alkylated DNA
           repair protein alkB-like protein [Medicago truncatula]
          Length = 266

 Score =  298 bits (762), Expect = 2e-78
 Identities = 151/260 (58%), Positives = 189/260 (72%), Gaps = 1/260 (0%)
 Frame = +1

Query: 139 KMEKGERDLKEFKVGSLPTLMYIPNFISNSEEIQLLSHIYNSPISKWTALKNRRLQNWGG 318
           K+E   ++L +FKVGSLPTL YIP+FIS++++  LL++IY +P SKW  LKNRRLQNWGG
Sbjct: 3   KIEPKHQNLSDFKVGSLPTLFYIPDFISDTDQTLLLNNIYGAPSSKWKLLKNRRLQNWGG 62

Query: 319 VVHEKGLLPQALPPWLTKITERIYKDTGLFPSAINHVLINEYFPDQGIMPHQDGPAYFPV 498
           VVHEKGLLPQ LP WLT  T++I +++GLFPS INHVLINEY P+QGIMPHQDGP+YFPV
Sbjct: 63  VVHEKGLLPQPLPSWLTNFTQKISEESGLFPSPINHVLINEYQPNQGIMPHQDGPSYFPV 122

Query: 499 AAILSLGCPAVMNFSPHLKLTACNDVARNTEIDTDFVSLKDDLNNDISSNHHCPFSVLLT 678
            AILSLG P VM+F+PH KL   +    + E D +      ++  D   + H PFSV+L 
Sbjct: 123 VAILSLGSPVVMDFTPHAKLKLDSQEVTDKESDGETF----EIGKDKWLDDHRPFSVILM 178

Query: 679 PCSLLIFKDEAYLDYLHGIEDTTVHHLDNVVNTFEAMKQHK-NSCLLGSEDRVEARSTDP 855
           P SLLIFKD+AY DYLHGI+D  +H  D  VN  EA+K ++ +  L GSED +EA   + 
Sbjct: 179 PRSLLIFKDKAYSDYLHGIKDCALHGYDGAVNEIEALKHNESDKHLFGSEDALEAIGKEE 238

Query: 856 IMSIQRTSTRISLTCRLVSK 915
             +I RTS RISLTCRLV K
Sbjct: 239 YKNISRTSNRISLTCRLVPK 258


>ref|XP_002265373.1| PREDICTED: probable alpha-ketoglutarate-dependent dioxygenase ABH6
           [Vitis vinifera] gi|296081091|emb|CBI18285.3| unnamed
           protein product [Vitis vinifera]
          Length = 262

 Score =  297 bits (760), Expect = 3e-78
 Identities = 152/256 (59%), Positives = 187/256 (73%), Gaps = 2/256 (0%)
 Frame = +1

Query: 154 ERDLKEFKVGSLPTLMYIPNFISNSEEIQLLSHIYNSPISKWTALKNRRLQNWGGVVHEK 333
           E +L +F+VG  PTL YIP+FI++ ++ QLL++IY +P+SKW +LKNRRLQNWGGVVHEK
Sbjct: 4   EGNLNKFRVGPHPTLFYIPDFITDYQQTQLLNNIYQAPVSKWKSLKNRRLQNWGGVVHEK 63

Query: 334 GLLPQALPPWLTKITERIYKDTGLFPSAINHVLINEYFPDQGIMPHQDGPAYFPVAAILS 513
           GLL Q LP WLT+ITERI++++GLFPSAINHVLINEY P+QGIMPHQDGPAYFPV AILS
Sbjct: 64  GLLSQDLPTWLTRITERIFEESGLFPSAINHVLINEYLPNQGIMPHQDGPAYFPVVAILS 123

Query: 514 LGCPAVMNFSPHLKLTA-CNDVARNTEIDTDFVSLKDDLNNDISSNHHCPFSVLLTPCSL 690
           LG P VM+F+PH +L    ND       D  F     ++      + H PFS+LL P SL
Sbjct: 124 LGSPVVMDFTPHSRLRLDTNDAEDKNSDDKSF-----EIETKKWLDDHHPFSILLMPRSL 178

Query: 691 LIFKDEAYLDYLHGIEDTTVHHLDNVVNTFEAMKQHKNSCLL-GSEDRVEARSTDPIMSI 867
           LIFKDE + +YLHGI+D+ V   D VVN  EA++QH+   L  GSE  VE      + SI
Sbjct: 179 LIFKDEMFSEYLHGIKDSEVQQYDKVVNDIEALEQHRLDPLFSGSEKAVEVMRNGELRSI 238

Query: 868 QRTSTRISLTCRLVSK 915
           QRT+TRISLTCRLV K
Sbjct: 239 QRTTTRISLTCRLVLK 254


>ref|XP_003548257.1| PREDICTED: probable alpha-ketoglutarate-dependent dioxygenase
           ABH6-like [Glycine max]
          Length = 263

 Score =  289 bits (740), Expect = 6e-76
 Identities = 153/256 (59%), Positives = 187/256 (73%), Gaps = 5/256 (1%)
 Frame = +1

Query: 163 LKEFKVGSLPTLMYIPNFISNSEEIQLLSHIYNSPISKWTALKNRRLQNWGGVVHEKGLL 342
           L  +KVGSLPTL Y+P+FI++S++  LL++IY +P SKW  LKNRRLQNWGGVVHEKGLL
Sbjct: 7   LAHYKVGSLPTLFYVPDFITDSDQSLLLNNIYGAPASKWKILKNRRLQNWGGVVHEKGLL 66

Query: 343 PQALPPWLTKITERIYKDTGLFPSAINHVLINEYFPDQGIMPHQDGPAYFPVAAILSLGC 522
           PQ LPPWLT +T++IY+++GLFPSA+NHVLINEY P+QGIMPHQDGPAYFPV AILSLG 
Sbjct: 67  PQILPPWLTNLTQKIYEESGLFPSALNHVLINEYLPNQGIMPHQDGPAYFPVVAILSLGS 126

Query: 523 PAVMNFSPH--LKLTACNDVARNTEIDTDFVSLKDDLNNDISSNHHCPFSVLLTPCSLLI 696
           P VM+F+PH   K  + +DV ++++  T F   KD   +D   NH  PFS+LL P SLLI
Sbjct: 127 PVVMDFTPHARFKQDSQDDVCKDSDGGT-FEIGKDKWLDD---NH--PFSILLMPRSLLI 180

Query: 697 FKDEAYLDYLHGIEDTTVHHLDNVVNTFEAMKQHKNS---CLLGSEDRVEARSTDPIMSI 867
           FKD+AY DYLHGI+D  VH  D  VN  EA+K HK S        +D +E        +I
Sbjct: 181 FKDKAYSDYLHGIKDCAVHCYDGAVNEAEALK-HKESDGNLFSSEDDELETIGKGEYKNI 239

Query: 868 QRTSTRISLTCRLVSK 915
            R STRISLTCRLV K
Sbjct: 240 SRKSTRISLTCRLVPK 255


>gb|AFK37545.1| unknown [Lotus japonicus]
          Length = 262

 Score =  289 bits (739), Expect = 7e-76
 Identities = 147/255 (57%), Positives = 186/255 (72%), Gaps = 1/255 (0%)
 Frame = +1

Query: 154 ERDLKEFKVGSLPTLMYIPNFISNSEEIQLLSHIYNSPISKWTALKNRRLQNWGGVVHEK 333
           E  L  +KVGSLPT+ Y+P+FI++SEE  LL +IY    SKW  +KNRRLQNWGGVVHEK
Sbjct: 4   EEKLSCYKVGSLPTVFYVPDFITDSEETFLLHNIYGVNASKWKPMKNRRLQNWGGVVHEK 63

Query: 334 GLLPQALPPWLTKITERIYKDTGLFPSAINHVLINEYFPDQGIMPHQDGPAYFPVAAILS 513
           GLLPQ LPPWLT +T+R+Y++ GLFPS +NHVLINEY P+QGIMPHQDGPAYFPV AILS
Sbjct: 64  GLLPQPLPPWLTNLTKRMYEELGLFPSPLNHVLINEYLPNQGIMPHQDGPAYFPVVAILS 123

Query: 514 LGCPAVMNFSPHLKLTACNDVARNTEIDTDFVSLKDDLNNDISSNHHCPFSVLLTPCSLL 693
           LG PAVM+F+PH +L    D   NT+ D++  +L  ++  +   + H PFSVLL P SLL
Sbjct: 124 LGSPAVMDFTPHARLKL--DSQDNTDKDSEGGTL--EIGEEKWLDDHHPFSVLLMPRSLL 179

Query: 694 IFKDEAYLDYLHGIEDTTVHHLDNVVNTFEAMK-QHKNSCLLGSEDRVEARSTDPIMSIQ 870
           IFKD+AY DYLHGI+D+ VH  D V+N  EA+K +  +     SE+ +E    +   +I 
Sbjct: 180 IFKDQAYSDYLHGIQDSAVHCYDGVINETEALKYKESDGHHCSSEEALETIGKEECKNIP 239

Query: 871 RTSTRISLTCRLVSK 915
           RTS R+SLTCR+V K
Sbjct: 240 RTSNRVSLTCRMVPK 254


>ref|XP_002319446.1| predicted protein [Populus trichocarpa] gi|222857822|gb|EEE95369.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  289 bits (739), Expect = 7e-76
 Identities = 149/256 (58%), Positives = 180/256 (70%), Gaps = 2/256 (0%)
 Frame = +1

Query: 154 ERDLKEFKVGSLPTLMYIPNFISNSEEIQLLSHIYNSPISKWTALKNRRLQNWGGVVHEK 333
           E +L EF VG LPT++Y P+FI+ +EE  LL  IY +P+SKW +LKNRRLQNWGGVVHEK
Sbjct: 2   EGNLNEFLVGQLPTVIYTPHFITQTEETHLLQKIYEAPLSKWKSLKNRRLQNWGGVVHEK 61

Query: 334 GLLPQALPPWLTKITERIYKDTGLFPSAINHVLINEYFPDQGIMPHQDGPAYFPVAAILS 513
           GLLPQ LPPWLT IT+RI +++GLFPSAINHVLINEY PDQGIMPHQDGPAYFPV AILS
Sbjct: 62  GLLPQDLPPWLTMITQRISEESGLFPSAINHVLINEYLPDQGIMPHQDGPAYFPVVAILS 121

Query: 514 LGCPAVMNFSPHLKLTACNDVARNTEIDTDFVSLKDDLNNDISSNHHCPFSVLLTPCSLL 693
           LG P VM+F+PH +L  C D  +N   + +F     +   +   N     SVLL P SLL
Sbjct: 122 LGSPVVMDFTPHSRLRTCTDTWKNEVDEQNFGREAKETETEQMDNPET--SVLLMPQSLL 179

Query: 694 IFKDEAYLDYLHGIEDTTVHHLDNVVNTFEAMKQHK-NSCLLGSED-RVEARSTDPIMSI 867
           IFKD AY DYLHGI+D+ VHH D  +N  EA+   K N    G+E   V+   +    +I
Sbjct: 180 IFKDNAYSDYLHGIKDSEVHHCDKAINEVEALAHDKLNEPSFGTESAAVQDVGSGDRNAI 239

Query: 868 QRTSTRISLTCRLVSK 915
            RT+ RISLTCR+V K
Sbjct: 240 HRTAKRISLTCRVVLK 255


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