BLASTX nr result

ID: Coptis24_contig00005598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005598
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282505.1| PREDICTED: uncharacterized protein LOC100262...   123   1e-26
ref|NP_190603.1| uncharacterized protein [Arabidopsis thaliana] ...   112   3e-23
ref|XP_002877740.1| hypothetical protein ARALYDRAFT_485385 [Arab...   111   5e-23
ref|XP_002523586.1| conserved hypothetical protein [Ricinus comm...   109   3e-22
ref|XP_003517299.1| PREDICTED: uncharacterized protein LOC100793...   108   4e-22

>ref|XP_002282505.1| PREDICTED: uncharacterized protein LOC100262755 [Vitis vinifera]
          Length = 397

 Score =  123 bits (309), Expect = 1e-26
 Identities = 68/125 (54%), Positives = 83/125 (66%), Gaps = 1/125 (0%)
 Frame = -1

Query: 394 FVDENQIFCCGSDLSDFFERESVFRHKDPYSLKKQRXXXXXXXXXXXXXXXXSTNFSRRS 215
           FVDEN+IFCCG DLSDFFERES+F+  DP  LKKQR                S+NFSRRS
Sbjct: 184 FVDENRIFCCGLDLSDFFERESLFQSSDPQVLKKQR-------SVSEKTAGSSSNFSRRS 236

Query: 214 LDPSG-ASGRTPRWVEFWSDAAIDKRRRNXXXXXXXXSPDRYYEISRPVHQRKTPKWVEG 38
           LD  G A GRTPRWVEFWSDAAID+RRRN        SP+R++++ R     + PKWV+ 
Sbjct: 237 LDTGGLAGGRTPRWVEFWSDAAIDRRRRN-SSSSSSSSPERFFDMPR----SEIPKWVDE 291

Query: 37  YLNRV 23
           Y+ ++
Sbjct: 292 YIEQI 296


>ref|NP_190603.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6523045|emb|CAB62313.1| putative protein [Arabidopsis
           thaliana] gi|28416689|gb|AAO42875.1| At3g50340
           [Arabidopsis thaliana] gi|110743322|dbj|BAE99549.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332645134|gb|AEE78655.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 403

 Score =  112 bits (280), Expect = 3e-23
 Identities = 66/130 (50%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
 Frame = -1

Query: 394 FVDENQIFCCGSDLSDFFERESVFRHKD--PYSLKKQRXXXXXXXXXXXXXXXXSTNFSR 221
           ++DE +IFCCGSDLSDFFERESVFR  D  P  L KQR                S+NFSR
Sbjct: 180 YIDETRIFCCGSDLSDFFERESVFRGSDTCPVVLTKQR---SVSEKSAGSSSSSSSNFSR 236

Query: 220 RSLDPSGASG-RTPRWVEFWSDAAIDKRRRN---XXXXXXXXSPDRYYEISRPVHQRKTP 53
            SLD     G  TPRWVEFWSDAA+D+RRRN           SP+RY ++ R     +TP
Sbjct: 237 MSLDSGRVHGSSTPRWVEFWSDAAVDRRRRNSASSMSSSHSSSPERYLDLPR----SETP 292

Query: 52  KWVEGYLNRV 23
           KWV+ Y+NR+
Sbjct: 293 KWVDDYVNRI 302


>ref|XP_002877740.1| hypothetical protein ARALYDRAFT_485385 [Arabidopsis lyrata subsp.
           lyrata] gi|297323578|gb|EFH53999.1| hypothetical protein
           ARALYDRAFT_485385 [Arabidopsis lyrata subsp. lyrata]
          Length = 403

 Score =  111 bits (278), Expect = 5e-23
 Identities = 66/130 (50%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
 Frame = -1

Query: 394 FVDENQIFCCGSDLSDFFERESVFRHKD--PYSLKKQRXXXXXXXXXXXXXXXXSTNFSR 221
           ++DE +IFCCGSDLSDFFERESVFR  D  P  L KQR                S+NFSR
Sbjct: 180 YIDETRIFCCGSDLSDFFERESVFRGSDTCPVVLTKQR---SVSEKSAGSSSSSSSNFSR 236

Query: 220 RSLDPSGASG-RTPRWVEFWSDAAIDKRRRN---XXXXXXXXSPDRYYEISRPVHQRKTP 53
            SLD     G  TPRWVEFWSDAA+D+RRRN           SP+RY E+ R     +TP
Sbjct: 237 MSLDSGRVHGSSTPRWVEFWSDAAVDRRRRNSASSMSSSHSSSPERYLELPR----SETP 292

Query: 52  KWVEGYLNRV 23
           KWV+ Y++R+
Sbjct: 293 KWVDDYVSRI 302


>ref|XP_002523586.1| conserved hypothetical protein [Ricinus communis]
           gi|223537148|gb|EEF38781.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 398

 Score =  109 bits (272), Expect = 3e-22
 Identities = 64/128 (50%), Positives = 80/128 (62%), Gaps = 4/128 (3%)
 Frame = -1

Query: 394 FVDENQIFCCGSDLSDFFERESVFR--HKDPYSLKKQRXXXXXXXXXXXXXXXXSTNFSR 221
           FVDEN+IFCCG DLSDFF+RES+FR    DP  LKKQR                STN+SR
Sbjct: 180 FVDENRIFCCGLDLSDFFDRESLFRSSESDPVILKKQR-------SVSEKSAGSSTNYSR 232

Query: 220 RSLDPSGASG-RTPRWVEFWSDAAIDKRRRN-XXXXXXXXSPDRYYEISRPVHQRKTPKW 47
           RSLD   A G RTPRWVEFWSDAA+D+RRRN         SP+R++++     + + P W
Sbjct: 233 RSLDTGIAFGSRTPRWVEFWSDAAVDRRRRNSASSSSESSSPERFFDMP---PRSEMPTW 289

Query: 46  VEGYLNRV 23
           V  Y+ ++
Sbjct: 290 VNEYIEQI 297


>ref|XP_003517299.1| PREDICTED: uncharacterized protein LOC100793662 [Glycine max]
          Length = 406

 Score =  108 bits (270), Expect = 4e-22
 Identities = 66/128 (51%), Positives = 77/128 (60%), Gaps = 4/128 (3%)
 Frame = -1

Query: 394 FVDENQIFCCGSDLSDFFERESVFR--HKDPYSLKKQRXXXXXXXXXXXXXXXXSTNFSR 221
           FVDEN+IFCCG DLSDFF+RES+FR    DP  LKKQR                S  FSR
Sbjct: 180 FVDENRIFCCGLDLSDFFDRESLFRSSEADPILLKKQR-----SVSEKSTGVSVSAAFSR 234

Query: 220 RSLDPSGASGRTPRWVEFWSDAAIDKRRRN--XXXXXXXXSPDRYYEISRPVHQRKTPKW 47
           RSLD   +  RTPRWVEFWSDAA DKRRRN          SP+R++E+ R     K P W
Sbjct: 235 RSLD---SGTRTPRWVEFWSDAATDKRRRNSSSSSLSASSSPERFFEMPR----SKVPGW 287

Query: 46  VEGYLNRV 23
           VE Y+ ++
Sbjct: 288 VEEYIGQI 295


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