BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005581
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 82   9e-20
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               91   1e-16
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]    50   1e-16
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]    52   4e-15
emb|CAN76151.1| hypothetical protein VITISV_012673 [Vitis vinifera]    49   7e-15

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 82.4 bits (202), Expect(2) = 9e-20
 Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
 Frame = -1

Query: 369 KDIASGRMLFQGQTENGLYPLHLTNTSNVT----SPTAFISAKASVSTWHTRLGHPSTDV 202
           KD+++G+MLFQG +E GLYP +   ++ V+    SPTA + AKA + TWH RLGHPS   
Sbjct: 684 KDLSTGKMLFQGPSEGGLYPFYWNASNGVSGIAISPTALMIAKADIHTWHRRLGHPSGGT 743

Query: 201 LHKLVSSKYIDVQG-STKIVFCSNCVIGKSSKL 106
           LH +V   ++ V G    +  C+ C +GKS +L
Sbjct: 744 LHSVVHKNHLPVIGYVNNMSVCTACQLGKSYRL 776



 Score = 40.0 bits (92), Expect(2) = 9e-20
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -2

Query: 104 FGTSTCKTFASLQLLHIDLWGPSPIFSINEFKYY 3
           F T  C +   LQLLH D+WGPSP  S   +++Y
Sbjct: 778 FSTLPCTSSRPLQLLHTDVWGPSPTSSCTGYRFY 811


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 39/88 (44%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = -1

Query: 369 KDIASGRMLFQGQTENGLYPLHL-TNTSNVTSPTAFISAKASVSTWHTRLGHPSTDVLHK 193
           KD+ +G+ML+ G++ENGLYP    + TS V+S  A++S++ S  TWH+RLGH S+ ++ K
Sbjct: 442 KDLKTGKMLYHGKSENGLYPFRFPSKTSKVSSSLAYVSSRVSAETWHSRLGHASSTIVSK 501

Query: 192 LVSSKYIDVQGSTKIVFCSNCVIGKSSK 109
           ++S+K + V GS+   FC +C +GKS +
Sbjct: 502 VLSNKAVPVLGSSNFSFCQSCPLGKSGE 529


>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
          Length = 1144

 Score = 49.7 bits (117), Expect(3) = 1e-16
 Identities = 18/37 (48%), Positives = 30/37 (81%)
 Frame = -3

Query: 475 WYADTGATNHLTSDLSNLSLHSDYKGTDKVMVGNGQG 365
           W  D+ A++++T D+ NLS+HS+Y GTD+V++G+G G
Sbjct: 332 WLIDSAASHNITGDIKNLSIHSEYDGTDEVLLGDGTG 368



 Score = 47.8 bits (112), Expect(3) = 1e-16
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = -1

Query: 360 ASGRMLFQGQTENGLYPLHLTNTSNVTSP-TAFISAKASVSTWHTRLGHPSTDVLHKLVS 184
           ++G +L +G  ENG+Y    +  +  T    A++  + S++ WH RLGHPS  V+  LV+
Sbjct: 373 STGAILLRGACENGVYIFPNSMMAPSTPKMVAYVHERTSINGWHKRLGHPSIKVVQNLVN 432

Query: 183 SKYIDVQGSTKIVFCSNCVIGKS 115
              + +  +   + C +C I K+
Sbjct: 433 LFSLPLTTNKLPLSCPSCSINKA 455



 Score = 33.9 bits (76), Expect(3) = 1e-16
 Identities = 11/37 (29%), Positives = 26/37 (70%)
 Frame = -2

Query: 113 QNCFGTSTCKTFASLQLLHIDLWGPSPIFSINEFKYY 3
           Q  FG+++ ++ + L++++ D+WGP+ +  +N  +YY
Sbjct: 457 QQPFGSTSFQSHSPLEIIYSDVWGPAHVTGLNGERYY 493


>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
          Length = 920

 Score = 51.6 bits (122), Expect(3) = 4e-15
 Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
 Frame = -1

Query: 375 MAKDIASGRMLFQGQTENGLYPLHLTNT----SNVTSPTAFISAKASV-----STWHTRL 223
           + KD  +  +L QG+ ENGLY   + +     S+V + +AF S  +S        WH RL
Sbjct: 251 LKKDRHTKMVLAQGKLENGLYKFPVFSNKKPYSSVNNASAFHSHFSSTIENKAELWHNRL 310

Query: 222 GHPSTDVLHKLVSSKYIDVQGSTKIVFCSNCVIGKSSKL 106
           GH ++D++ K++++  +   G  K   CS+C + KS +L
Sbjct: 311 GHVASDIVSKVMNTCNV-ASGKYKSTVCSDCQLAKSHRL 348



 Score = 47.4 bits (111), Expect(3) = 4e-15
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = -3

Query: 475 WYADTGATNHLTSDLSNLSLHSDYKGTDKVMVGN 374
           WY D+GA++HLT +L NL+  S Y GTD+V +GN
Sbjct: 195 WYLDSGASHHLTQNLGNLTSTSPYTGTDRVTIGN 228



 Score = 27.3 bits (59), Expect(3) = 4e-15
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -2

Query: 71  LQLLHIDLWGPSPIFSINEFKYY 3
           L+L++ D+WGP+ + S +  KY+
Sbjct: 361 LELVYTDIWGPASVKSTSGAKYF 383


>emb|CAN76151.1| hypothetical protein VITISV_012673 [Vitis vinifera]
          Length = 979

 Score = 48.9 bits (115), Expect(3) = 7e-15
 Identities = 20/40 (50%), Positives = 29/40 (72%)
 Frame = -3

Query: 475 WYADTGATNHLTSDLSNLSLHSDYKGTDKVMVGNGQGHCI 356
           W+ D GAT+HL SDL+NL++H+ +   DKV+VG+  G  I
Sbjct: 158 WFLDAGATHHLISDLNNLTIHNPFTSGDKVIVGDDNGTII 197



 Score = 44.3 bits (103), Expect(3) = 7e-15
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
 Frame = -1

Query: 375 MAKDIASGRMLFQGQTENGLYPLHLTNTSNVTSPTAF-----ISAKASVSTWHTRLGHPS 211
           + KD  +  +  QG+ E G Y +    T  V  P AF     IS   S+   H RLGH  
Sbjct: 205 LVKDQKTRLVFLQGKNEKGFYKIPAA-TRVVGHPLAFYATSSISDAGSLRLLHNRLGHLF 263

Query: 210 TDVLHKLVSSKYIDVQGSTKIVFCSNCVIGKSSKL 106
            DV+ K++S   I ++       C +C + KS +L
Sbjct: 264 VDVVSKILSLCKIPLKHDNNNSICESCQLAKSHRL 298



 Score = 32.3 bits (72), Expect(3) = 7e-15
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 104 FGTSTCKTFASLQLLHIDLWGPSPIFSINEFKYY 3
           F  ST +      L+++DLWG +PI  +N  +Y+
Sbjct: 300 FQRSTSRAIKPFGLIYVDLWGATPIVFVNGARYF 333