BLASTX nr result

ID: Coptis24_contig00005570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005570
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271854.1| PREDICTED: uncharacterized protein C24H6.02c...   136   7e-30
ref|XP_002530932.1| conserved hypothetical protein [Ricinus comm...   132   1e-28
ref|XP_003556240.1| PREDICTED: DNL-type zinc finger protein-like...   129   1e-27
ref|NP_001236852.1| uncharacterized protein LOC100527239 [Glycin...   129   1e-27
ref|XP_002312005.1| predicted protein [Populus trichocarpa] gi|2...   126   5e-27

>ref|XP_002271854.1| PREDICTED: uncharacterized protein C24H6.02c [Vitis vinifera]
          Length = 192

 Score =  136 bits (342), Expect = 7e-30
 Identities = 89/196 (45%), Positives = 105/196 (53%), Gaps = 33/196 (16%)
 Frame = +3

Query: 90  MAARLLQRRISSALFGHQSPASLLFKDNASSFGKNAVTQSSLLSTHNYFSTIQTQVEPSN 269
           MAARLLQR I  +  G + P + + K+ +  F  +A   ++      Y   + TQVEP+N
Sbjct: 1   MAARLLQR-IGRSFLGPKHPQTPIIKEPSWQFLPSA--SAAFTRDQFYRRGLGTQVEPTN 57

Query: 270 KNEAENDDKKC---------------------------------LKTSPRHDLAMMFTCK 350
              A  D++KC                                 LKTS RHDLAM+FTCK
Sbjct: 58  Y--ANEDEEKCEAGSLNLNSDSADDVSQVKSDDNSAVKYTAMSNLKTSSRHDLAMIFTCK 115

Query: 351 VCETRSVKTMSRDSYEXXXXXXXXXXXXXKHLIADRLGMFGEPGSVEDFLAARGEEFIKG 530
           VCETRSVKT  R+SYE              HLIADRLG FGEPGS+EDFL ARGEE  KG
Sbjct: 116 VCETRSVKTACRESYERGVVVVRCDGCSNLHLIADRLGWFGEPGSIEDFLDARGEEVKKG 175

Query: 531 DPDTLNLTPEDLAGKK 578
             DTLNLT EDLAG K
Sbjct: 176 SADTLNLTLEDLAGMK 191


>ref|XP_002530932.1| conserved hypothetical protein [Ricinus communis]
           gi|223529491|gb|EEF31447.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score =  132 bits (332), Expect = 1e-28
 Identities = 71/115 (61%), Positives = 79/115 (68%), Gaps = 5/115 (4%)
 Frame = +3

Query: 261 PSNKNEAENDDKK-----CLKTSPRHDLAMMFTCKVCETRSVKTMSRDSYEXXXXXXXXX 425
           PS+ N  E+   K      LKTSPRHDLAM+FTCKVCETRSVKT+ R+SYE         
Sbjct: 85  PSDINSNEDSPVKYSAVSSLKTSPRHDLAMIFTCKVCETRSVKTICRESYEKGVVVARCG 144

Query: 426 XXXXKHLIADRLGMFGEPGSVEDFLAARGEEFIKGDPDTLNLTPEDLAGKKNISD 590
                HLIADRLG FGEPGS+EDFLAARGEE  KG  DTLNLT EDLAG K + +
Sbjct: 145 GCNNLHLIADRLGWFGEPGSIEDFLAARGEEVRKGSTDTLNLTLEDLAGNKILKE 199


>ref|XP_003556240.1| PREDICTED: DNL-type zinc finger protein-like [Glycine max]
          Length = 189

 Score =  129 bits (323), Expect = 1e-27
 Identities = 81/191 (42%), Positives = 103/191 (53%), Gaps = 28/191 (14%)
 Frame = +3

Query: 90  MAARLLQRRISSALFGHQ------------SPASLLFKDNASSFGKNAVT---------- 203
           MAAR+LQ+R+ S +F  Q            SP S +   N   F +  VT          
Sbjct: 1   MAARMLQKRLIS-IFSRQTHHPITQESSWYSPTSAIL--NRYGFHQRRVTTHTNPIKPVC 57

Query: 204 ------QSSLLSTHNYFSTIQTQVEPSNKNEAENDDKKCLKTSPRHDLAMMFTCKVCETR 365
                 ++  L +      + T +  +  +  +   K  LKTS RHDLAM+FTCKVCETR
Sbjct: 58  EDVENNEADTLKSSPNPDEVATSISVNETSSIKFSAKSSLKTSSRHDLAMVFTCKVCETR 117

Query: 366 SVKTMSRDSYEXXXXXXXXXXXXXKHLIADRLGMFGEPGSVEDFLAARGEEFIKGDPDTL 545
           S+KT+ R+SYE              HLIAD LG FGEPGS+EDFLA+RGEE  +G  DTL
Sbjct: 118 SIKTVCRESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSIEDFLASRGEEVKRGSVDTL 177

Query: 546 NLTPEDLAGKK 578
           NLT EDLAG+K
Sbjct: 178 NLTLEDLAGRK 188


>ref|NP_001236852.1| uncharacterized protein LOC100527239 [Glycine max]
           gi|255631854|gb|ACU16294.1| unknown [Glycine max]
          Length = 188

 Score =  129 bits (323), Expect = 1e-27
 Identities = 82/190 (43%), Positives = 100/190 (52%), Gaps = 27/190 (14%)
 Frame = +3

Query: 90  MAARLLQRRISSALFGHQ-----------SPASLLFKDNASSFGKNAV------------ 200
           MAAR+LQRR  S +F  Q           SP S +   N+  F +  V            
Sbjct: 1   MAARMLQRRFIS-IFSRQTHHPITQESWYSPTSAIL--NSYGFHQRGVMTHTNPIKPVCE 57

Query: 201 ----TQSSLLSTHNYFSTIQTQVEPSNKNEAENDDKKCLKTSPRHDLAMMFTCKVCETRS 368
                ++  L +      + T +  +  +  +   K  LKTS RHDL M+FTCKVCETRS
Sbjct: 58  DVENNEADTLKSSPNPDEVATSISVNETSSVKFSTKSSLKTSSRHDLVMVFTCKVCETRS 117

Query: 369 VKTMSRDSYEXXXXXXXXXXXXXKHLIADRLGMFGEPGSVEDFLAARGEEFIKGDPDTLN 548
           +KT  R+SYE              HLIAD LG FGEPGSVEDFLAARGEE  +G  DTLN
Sbjct: 118 IKTACRESYEKGVVVARCGGCNNLHLIADHLGWFGEPGSVEDFLAARGEEVKRGSVDTLN 177

Query: 549 LTPEDLAGKK 578
           LT EDLAG+K
Sbjct: 178 LTLEDLAGRK 187


>ref|XP_002312005.1| predicted protein [Populus trichocarpa] gi|222851825|gb|EEE89372.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  126 bits (317), Expect = 5e-27
 Identities = 87/198 (43%), Positives = 111/198 (56%), Gaps = 34/198 (17%)
 Frame = +3

Query: 87  LMAAR--LLQRRISSALFGHQSP-ASLLFKDNASSFGKNAVTQSSLLSTHNYFST-IQTQ 254
           + AAR  L  RR+ SAL  +  P  S L K+++     +A   SSL + ++++   +QT 
Sbjct: 1   MAAARNTLQLRRLLSALAHNNQPFTSSLNKEHSWKLLPSA---SSLFTRNDFYGRGLQTL 57

Query: 255 VEPSNK--NEAENDDK----KC------------------------LKTSPRHDLAMMFT 344
            +P+N+   E+EN +      C                        LKTSPRHDLAM+FT
Sbjct: 58  AKPANQANEESENHENGLKPNCSSANAPAQVNSNEGSATTYSSLSNLKTSPRHDLAMIFT 117

Query: 345 CKVCETRSVKTMSRDSYEXXXXXXXXXXXXXKHLIADRLGMFGEPGSVEDFLAARGEEFI 524
           CKVCETRSVKT+ R+SYE              HLIAD LG FG+PGS+E+ LAARGEE  
Sbjct: 118 CKVCETRSVKTVCRESYEKGVVVARCGGCNNLHLIADHLGWFGQPGSIEEILAARGEEVK 177

Query: 525 KGDPDTLNLTPEDLAGKK 578
           KG  DT NLT EDLAGKK
Sbjct: 178 KGSADTFNLTLEDLAGKK 195


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