BLASTX nr result
ID: Coptis24_contig00005549
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005549
(2017 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|2... 935 0.0
ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|2... 920 0.0
ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding pro... 918 0.0
ref|XP_003538152.1| PREDICTED: ruBisCO large subunit-binding pro... 917 0.0
ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro... 917 0.0
>ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|222837676|gb|EEE76041.1|
predicted protein [Populus trichocarpa]
Length = 587
Score = 935 bits (2416), Expect = 0.0
Identities = 494/583 (84%), Positives = 534/583 (91%), Gaps = 2/583 (0%)
Frame = +1
Query: 49 MASANAISTASIFQTPKQGSLSGRIDQ--GQRVNYGSSGSKFDVRASAKKIAFDQDSRTA 222
MA++NA+STASI +PKQG L R +Q R+NYG S +F VRA+AK IAFDQ SR A
Sbjct: 1 MATSNALSTASILCSPKQGGLRRRGNQQNNSRLNYGLSSRRFSVRANAKDIAFDQKSRAA 60
Query: 223 IQSGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIRE 402
+QSGIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL D MENAGAALIRE
Sbjct: 61 LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE 120
Query: 403 VASKTNDSAGDGTTTASVLAREIIQLGLFAVTSGANPVSIKKGIDKTVQGLVHKLEEKAR 582
VASKTNDSAGDGTTTASVLAREII+LGL +VTSGANPVSIK+GIDKTVQGLV +LE+KAR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLVEELEKKAR 180
Query: 583 PLKGHDDIEAIASISAGNDEIIGTMIADAIDKVGPDGVLSIESSASFETTVEVEEGMEID 762
P+KG DDI+A+ASISAGNDE+IGTMIADAIDKVGPDGVLSIESS+SFET VEVEEGMEID
Sbjct: 181 PVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETVVEVEEGMEID 240
Query: 763 RGYISPQFVTNPEKLIVEFESARVLVTDQKISAIKDIIPLLEKTSQLRAPLLIIAEDVSG 942
RGYISPQFVTNPEKLI EFE+ARVL+TDQKI+AIKDIIPLLEKT+QLRAPLLIIAEDV+G
Sbjct: 241 RGYISPQFVTNPEKLICEFENARVLITDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVTG 300
Query: 943 EALATLVVNKLRGILNVVAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQ 1122
EALATLVVNKLRG+LNV AIKAPGFGERRKA+LQDIAILTGAEFQASDLGL IE T IEQ
Sbjct: 301 EALATLVVNKLRGVLNVAAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ 360
Query: 1123 LGVARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGV 1302
LG+ARKVT++KDSTTIIADAASKDE+QARIAQ+KKEL+ETDSVYDSEKLAERIAKLSGGV
Sbjct: 361 LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV 420
Query: 1303 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDA 1482
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS CVPAIKDK+EDA
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKIEDA 480
Query: 1483 DERLGADIVQKALVSPASLIAQNAXXXXXXXXXXXXASAWEVGYNAMTDTYENLMASGVI 1662
DERLGADIVQKALVSPASLIAQNA AS WE+GYNAMTD YENLM +GVI
Sbjct: 481 DERLGADIVQKALVSPASLIAQNAGIEGEVVVEKLKASEWEIGYNAMTDKYENLMEAGVI 540
Query: 1663 DPAKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVSSG 1791
DPAKVTRCALQN+ASVAGMVLTTQAIVVEKPK K+ AA + G
Sbjct: 541 DPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPKTPAAAATQG 583
>ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|222849933|gb|EEE87480.1|
predicted protein [Populus trichocarpa]
Length = 586
Score = 920 bits (2378), Expect = 0.0
Identities = 489/586 (83%), Positives = 532/586 (90%), Gaps = 2/586 (0%)
Frame = +1
Query: 49 MASANAISTASIFQTPKQGSL--SGRIDQGQRVNYGSSGSKFDVRASAKKIAFDQDSRTA 222
MA++NA+STASI +PKQG L G R+N+G S +F VRA+AK IAFDQDSR A
Sbjct: 1 MATSNALSTASILCSPKQGGLRRKGNQQHNSRLNFGQSTRRFAVRANAKDIAFDQDSRAA 60
Query: 223 IQSGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIRE 402
+QSGIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL D MENAGAALIRE
Sbjct: 61 LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE 120
Query: 403 VASKTNDSAGDGTTTASVLAREIIQLGLFAVTSGANPVSIKKGIDKTVQGLVHKLEEKAR 582
VASKTNDSAGDGTTTASVLAREII+LGL +VTSGANPVSIKKGIDKTVQGLV +LE++AR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKRAR 180
Query: 583 PLKGHDDIEAIASISAGNDEIIGTMIADAIDKVGPDGVLSIESSASFETTVEVEEGMEID 762
P+KG DDI+A+A+ISAGNDE+IGTMIADAIDKVGPDGVLSIESS+SFETTVEVEEGMEID
Sbjct: 181 PVKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID 240
Query: 763 RGYISPQFVTNPEKLIVEFESARVLVTDQKISAIKDIIPLLEKTSQLRAPLLIIAEDVSG 942
RGYISPQFVTNPEKLI FE+ARVLVTDQKISAIKDIIPLLEKT+QLR+PLLIIAEDV+G
Sbjct: 241 RGYISPQFVTNPEKLICVFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTG 300
Query: 943 EALATLVVNKLRGILNVVAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQ 1122
EALATLVVNKLRGILNV AIKAPGFGERRKA+LQDIAILTGAEFQASDLGL IE T IEQ
Sbjct: 301 EALATLVVNKLRGILNVSAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ 360
Query: 1123 LGVARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGV 1302
LG+ARKVT++KDSTTIIADAASKDE+QARIAQ+KKEL+ETDSVYDSEKLAERIAKLSGGV
Sbjct: 361 LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV 420
Query: 1303 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDA 1482
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS VPAIK+K++DA
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTHVPAIKEKIKDA 480
Query: 1483 DERLGADIVQKALVSPASLIAQNAXXXXXXXXXXXXASAWEVGYNAMTDTYENLMASGVI 1662
DERLGADIVQKALV+PASLIAQNA S WE+GYNAMTD YENL+ +GVI
Sbjct: 481 DERLGADIVQKALVAPASLIAQNAGIEGEVVVEKLKESEWEMGYNAMTDKYENLVEAGVI 540
Query: 1663 DPAKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVSSGLAV 1800
DPAKVTRCALQN+ASVAGMVLTTQAIVVEKPK ++ AA GL V
Sbjct: 541 DPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPRTPAAASPQGLTV 586
>ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Glycine max]
Length = 584
Score = 918 bits (2372), Expect = 0.0
Identities = 479/584 (82%), Positives = 532/584 (91%)
Frame = +1
Query: 49 MASANAISTASIFQTPKQGSLSGRIDQGQRVNYGSSGSKFDVRASAKKIAFDQDSRTAIQ 228
MAS NA+S+ASI ++P + SL+ R + RVNY ++F V+ASAK+IAFDQ SR+A+Q
Sbjct: 1 MASTNALSSASILRSPNRQSLTRRANHNGRVNYRKPNNRFSVKASAKEIAFDQHSRSAMQ 60
Query: 229 SGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIREVA 408
+GIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL D MENAGAALIREVA
Sbjct: 61 AGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVA 120
Query: 409 SKTNDSAGDGTTTASVLAREIIQLGLFAVTSGANPVSIKKGIDKTVQGLVHKLEEKARPL 588
SKTNDSAGDGTTTASVLAREII+LGL +VTSGANPVS+K+GIDKTVQGLV +LE+KARP+
Sbjct: 121 SKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKKARPV 180
Query: 589 KGHDDIEAIASISAGNDEIIGTMIADAIDKVGPDGVLSIESSASFETTVEVEEGMEIDRG 768
KG DDI+A+ASISAGNDE+IG MIA+AIDKVGPDGVLSIESS+SFETTVEVEEGMEIDRG
Sbjct: 181 KGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRG 240
Query: 769 YISPQFVTNPEKLIVEFESARVLVTDQKISAIKDIIPLLEKTSQLRAPLLIIAEDVSGEA 948
YISPQFVTNPEKLIVEFE+ARVL+TDQKISAIKDIIPLLEKT+QLRAPLLIIAEDV+GEA
Sbjct: 241 YISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEA 300
Query: 949 LATLVVNKLRGILNVVAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQLG 1128
LATLVVNKLRGILNV AIKAPGFGERRKALLQDIAILTGAEFQASDLGLL+E T +EQLG
Sbjct: 301 LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQLG 360
Query: 1129 VARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGVAV 1308
+ARK+T++KDSTT+IADAA+KDE+QAR+AQ+KKEL++TDSVYD+EKLAERIAKLSGGVAV
Sbjct: 361 LARKITISKDSTTVIADAATKDELQARVAQLKKELSQTDSVYDTEKLAERIAKLSGGVAV 420
Query: 1309 IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDADE 1488
IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS VPAIKDKLEDADE
Sbjct: 421 IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSTHVPAIKDKLEDADE 480
Query: 1489 RLGADIVQKALVSPASLIAQNAXXXXXXXXXXXXASAWEVGYNAMTDTYENLMASGVIDP 1668
RLGADIVQKAL++PA+LIAQNA + WEVGYNAM D YENL+ +GVIDP
Sbjct: 481 RLGADIVQKALIAPAALIAQNAGIEGEVVVEKIKSGEWEVGYNAMADRYENLVEAGVIDP 540
Query: 1669 AKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVSSGLAV 1800
AKVTRCALQNAASVAGMVLTTQAIVVEKPK K+ A GL V
Sbjct: 541 AKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAGAPQGLTV 584
>ref|XP_003538152.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like isoform 1 [Glycine max]
Length = 584
Score = 917 bits (2371), Expect = 0.0
Identities = 479/584 (82%), Positives = 532/584 (91%)
Frame = +1
Query: 49 MASANAISTASIFQTPKQGSLSGRIDQGQRVNYGSSGSKFDVRASAKKIAFDQDSRTAIQ 228
MAS NA+S+ASI ++P + SL+ R + RVNY S+F V+ASAK+IAFDQ SR+A+Q
Sbjct: 1 MASTNALSSASILRSPNRQSLTRRANHNGRVNYRQPNSRFSVKASAKEIAFDQHSRSAMQ 60
Query: 229 SGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIREVA 408
+GIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL D MENAGAALIREVA
Sbjct: 61 AGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVA 120
Query: 409 SKTNDSAGDGTTTASVLAREIIQLGLFAVTSGANPVSIKKGIDKTVQGLVHKLEEKARPL 588
SKTNDSAGDGTTTASVLAREII+LGL +VTSGANPVS+K+GIDKTVQGLV +LE+KARP+
Sbjct: 121 SKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKKARPV 180
Query: 589 KGHDDIEAIASISAGNDEIIGTMIADAIDKVGPDGVLSIESSASFETTVEVEEGMEIDRG 768
KG DDI+A+ASISAGNDE+IG MIA+AIDKVGPDGVLSIESS+SFETTVEVEEGMEIDRG
Sbjct: 181 KGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRG 240
Query: 769 YISPQFVTNPEKLIVEFESARVLVTDQKISAIKDIIPLLEKTSQLRAPLLIIAEDVSGEA 948
YISPQFVTNPEKLIVEFE+ARVL+TDQKISAIKDIIPLLEKT+QLRAPLLIIAEDV+GEA
Sbjct: 241 YISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEA 300
Query: 949 LATLVVNKLRGILNVVAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQLG 1128
LATLVVNKLRGILNV AIKAPGFGERRKALLQDIAILTGAEFQASDLGLL+E T +EQLG
Sbjct: 301 LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQLG 360
Query: 1129 VARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGVAV 1308
+ARK+T++KDSTTIIADAA+KDE+QAR+AQ+KKEL++TDSVYD+EKLAERIAKLSGGVAV
Sbjct: 361 LARKITISKDSTTIIADAATKDELQARVAQLKKELSQTDSVYDTEKLAERIAKLSGGVAV 420
Query: 1309 IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDADE 1488
IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS VPA+KDKL+DADE
Sbjct: 421 IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSTHVPALKDKLDDADE 480
Query: 1489 RLGADIVQKALVSPASLIAQNAXXXXXXXXXXXXASAWEVGYNAMTDTYENLMASGVIDP 1668
RLGADIVQKAL++PA+LIAQNA + WEVGYNAM D YENL+ +GVIDP
Sbjct: 481 RLGADIVQKALIAPAALIAQNAGIEGEVVVEKIKSGEWEVGYNAMVDRYENLVEAGVIDP 540
Query: 1669 AKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVSSGLAV 1800
AKVTRCALQNAASVAGMVLTTQAIVVEKPK K+ A GL V
Sbjct: 541 AKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAGAPQGLTV 584
>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Vitis vinifera]
Length = 586
Score = 917 bits (2369), Expect = 0.0
Identities = 488/586 (83%), Positives = 530/586 (90%), Gaps = 2/586 (0%)
Frame = +1
Query: 49 MASANAISTASIFQTPKQGSLSGRIDQ--GQRVNYGSSGSKFDVRASAKKIAFDQDSRTA 222
MASANAISTASI ++PKQ S R++Q G + NY S ++F VRASAK+IAFDQ SR A
Sbjct: 1 MASANAISTASIIRSPKQESFRRRVNQQQGPKFNYRPSNNRFVVRASAKEIAFDQSSRAA 60
Query: 223 IQSGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADAMENAGAALIRE 402
+Q+GIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIELADAMENAGAALIRE
Sbjct: 61 LQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADAMENAGAALIRE 120
Query: 403 VASKTNDSAGDGTTTASVLAREIIQLGLFAVTSGANPVSIKKGIDKTVQGLVHKLEEKAR 582
VASKTNDSAGDGTTTASVLAREII+LGL +VTSGANPVSIKKGIDKTV LV +LE+KAR
Sbjct: 121 VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHELVKELEKKAR 180
Query: 583 PLKGHDDIEAIASISAGNDEIIGTMIADAIDKVGPDGVLSIESSASFETTVEVEEGMEID 762
P++G DDI+A+ASISAGNDE IG+MIADAI+KVGPDGVLSIESS+SFETTV+VEEGMEID
Sbjct: 181 PVEGGDDIKAVASISAGNDEFIGSMIADAINKVGPDGVLSIESSSSFETTVDVEEGMEID 240
Query: 763 RGYISPQFVTNPEKLIVEFESARVLVTDQKISAIKDIIPLLEKTSQLRAPLLIIAEDVSG 942
RGYISPQFVTNPEKLI EFE+ARVLVTDQKI+ IKDIIPLLEKT+QLR+PLLI+AEDV+G
Sbjct: 241 RGYISPQFVTNPEKLIAEFENARVLVTDQKITTIKDIIPLLEKTTQLRSPLLIVAEDVTG 300
Query: 943 EALATLVVNKLRGILNVVAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIEKTDIEQ 1122
EALATLVVNKLRGILNV AIKAPGFGERRKALLQDIAI+TGAEFQA+DLGLLIE T +EQ
Sbjct: 301 EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIMTGAEFQANDLGLLIENTSVEQ 360
Query: 1123 LGVARKVTVTKDSTTIIADAASKDEVQARIAQIKKELAETDSVYDSEKLAERIAKLSGGV 1302
LG+ARKVT+TKDSTTIIADAASKDE+QARIAQIKKELAETDSVYD+EKLAERIAKLSGGV
Sbjct: 361 LGLARKVTITKDSTTIIADAASKDEIQARIAQIKKELAETDSVYDTEKLAERIAKLSGGV 420
Query: 1303 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSACVPAIKDKLEDA 1482
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAA VHLS VPAIKDKLEDA
Sbjct: 421 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDKLEDA 480
Query: 1483 DERLGADIVQKALVSPASLIAQNAXXXXXXXXXXXXASAWEVGYNAMTDTYENLMASGVI 1662
DERLGADIVQKALV+PASLIA NA A W VGYNAMTD YENL+ +GVI
Sbjct: 481 DERLGADIVQKALVAPASLIAHNAGVEGEVVVEKIKACEWAVGYNAMTDKYENLVEAGVI 540
Query: 1663 DPAKVTRCALQNAASVAGMVLTTQAIVVEKPKDKSTTAAVSSGLAV 1800
DPAKV RCALQNAASVAGMVLTTQAIVVEK K K+ AA GL +
Sbjct: 541 DPAKVARCALQNAASVAGMVLTTQAIVVEKAKPKAPVAAPPQGLTI 586