BLASTX nr result
ID: Coptis24_contig00005534
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005534 (2445 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vit... 484 e-134 emb|CBI30950.3| unnamed protein product [Vitis vinifera] 470 e-130 ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cuc... 459 e-126 ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cuc... 459 e-126 dbj|BAD19063.1| auxin response factor 3 [Cucumis sativus] 459 e-126 >ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera] Length = 908 Score = 484 bits (1247), Expect = e-134 Identities = 240/316 (75%), Positives = 274/316 (86%), Gaps = 3/316 (0%) Frame = -1 Query: 1317 FSDSNGNLVNTPSVSPLHSLLGSFSQEETSHLLNLQRNNSVVPSAAWLPKRTGVESLLPS 1138 FSDS GN +P +SPL SLLGSF Q+E+S+LLN+ R+ S++PSAAWLPKR VE LLPS Sbjct: 588 FSDSTGNPGTSPIISPLQSLLGSFPQDESSNLLNMPRSTSLMPSAAWLPKRVAVEPLLPS 647 Query: 1137 GAP-CVLPQLDQLGPPQTNGSQHSSGLPPFPGRECSVDQDVSTDPQNHLLFGVNIDSSSL 961 GA C+LPQ++QLG PQTN SQ+S LPPFPGRECS+DQ+ STDPQ+HLLFGVNI+ SSL Sbjct: 648 GASQCILPQVEQLGQPQTNISQNSISLPPFPGRECSIDQEGSTDPQSHLLFGVNIEPSSL 707 Query: 960 LMQNGMPDLRGVGSETDSTTLPFAASNFLSGGGPDFPLNQSVTTSSCLDESGFLHSPDDV 781 LMQNGM LRGVGSE+DST +PF++SNF+S G DF LN ++T SSC+DESGFL SP++V Sbjct: 708 LMQNGMSGLRGVGSESDSTAIPFSSSNFMSSTGTDFSLNPAMTPSSCIDESGFLQSPENV 767 Query: 780 GQVNPPTRTFVKVHKTGSFGRSLDITRFSSYHELRSELARMFGLEGQLEDPLRSGWQLVF 601 GQVNPPTRTFVKV+K+GSFGRSLDIT+FSSYHELR ELARMFGLEGQLEDP RSGWQLVF Sbjct: 768 GQVNPPTRTFVKVYKSGSFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVF 827 Query: 600 VDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQQMGKQGLELLNNV--QRLSSGICDDY 427 VDRENDVLLLGDDPW EFVNSVWCIKILS QEVQQMGK+GLELLN+V QRL+S CDDY Sbjct: 828 VDRENDVLLLGDDPWPEFVNSVWCIKILSLQEVQQMGKRGLELLNSVPIQRLTSSSCDDY 887 Query: 426 VGRQDSRTMSNGITSV 379 RQDSR +S GITSV Sbjct: 888 ASRQDSRNLSTGITSV 903 Score = 470 bits (1210), Expect = e-130 Identities = 241/302 (79%), Positives = 254/302 (84%), Gaps = 4/302 (1%) Frame = -1 Query: 2445 DSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLXXXXXXXATNSRFTIFYN 2266 DSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMH+GLL ATNSRFTIFYN Sbjct: 209 DSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYN 268 Query: 2265 PRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPSRWA 2086 PRASPSEFVIPL KY KAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDP RW Sbjct: 269 PRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWP 328 Query: 2085 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGVPSFHVGN 1906 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPG+PS H Sbjct: 329 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSLHGIK 388 Query: 1905 NDDLGINSPLMWLRGDSGDRG---MNFQGIGAAPWIQPRFDASLLGLQPDMYQAMAAAAL 1735 +DDLG+NSPLMWLRGD+ DRG +NFQGIG PW+QPR DAS+LGLQ DMYQAMAAAAL Sbjct: 389 DDDLGMNSPLMWLRGDNVDRGIQSLNFQGIGVNPWMQPRLDASMLGLQTDMYQAMAAAAL 448 Query: 1734 QEMRTVDGSKQAPTS-LQFQQTQDVPNLSPPQSVQNLSALVQRQMLPQGQSQQAFLQCIQ 1558 QEMR VD SKQAP L +QQ Q+V + S S ++Q QML Q Q QQAFLQ I Sbjct: 449 QEMRAVDPSKQAPAPLLHYQQPQNVASRS--------SCIMQPQMLQQSQPQQAFLQGIH 500 Query: 1557 GN 1552 N Sbjct: 501 EN 502 >emb|CBI30950.3| unnamed protein product [Vitis vinifera] Length = 531 Score = 470 bits (1210), Expect = e-130 Identities = 241/302 (79%), Positives = 254/302 (84%), Gaps = 4/302 (1%) Frame = -1 Query: 2445 DSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLXXXXXXXATNSRFTIFYN 2266 DSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMH+GLL ATNSRFTIFYN Sbjct: 209 DSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYN 268 Query: 2265 PRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPSRWA 2086 PRASPSEFVIPL KY KAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDP RW Sbjct: 269 PRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWP 328 Query: 2085 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGVPSFHVGN 1906 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPG+PS H Sbjct: 329 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSLHGIK 388 Query: 1905 NDDLGINSPLMWLRGDSGDRG---MNFQGIGAAPWIQPRFDASLLGLQPDMYQAMAAAAL 1735 +DDLG+NSPLMWLRGD+ DRG +NFQGIG PW+QPR DAS+LGLQ DMYQAMAAAAL Sbjct: 389 DDDLGMNSPLMWLRGDNVDRGIQSLNFQGIGVNPWMQPRLDASMLGLQTDMYQAMAAAAL 448 Query: 1734 QEMRTVDGSKQAPTS-LQFQQTQDVPNLSPPQSVQNLSALVQRQMLPQGQSQQAFLQCIQ 1558 QEMR VD SKQAP L +QQ Q+V + S S ++Q QML Q Q QQAFLQ I Sbjct: 449 QEMRAVDPSKQAPAPLLHYQQPQNVASRS--------SCIMQPQMLQQSQPQQAFLQGIH 500 Query: 1557 GN 1552 N Sbjct: 501 EN 502 >ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cucumis sativus] Length = 916 Score = 459 bits (1181), Expect = e-126 Identities = 235/301 (78%), Positives = 251/301 (83%), Gaps = 8/301 (2%) Frame = -1 Query: 2445 DSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLXXXXXXXATNSRFTIFYN 2266 DSV+FIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMH+GLL ATNSRFTIFYN Sbjct: 209 DSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYN 268 Query: 2265 PRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPSRWA 2086 PRASPSEF+IPL KYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLD +RW Sbjct: 269 PRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSTRWP 328 Query: 2085 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGVPSFHVGN 1906 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWP G PSFH Sbjct: 329 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGFPSFHGLK 388 Query: 1905 NDDLGINSPLMWLRGDSGDRG---MNFQGIGAAPWIQPRFDASLLGLQPDMYQAMAAAAL 1735 DDLG+NS LMWLRGD DRG +NF GIG APW+QPR DAS++GLQP++YQAMAAAAL Sbjct: 389 EDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVAPWMQPRLDASMVGLQPEIYQAMAAAAL 448 Query: 1734 QEMRTVDGSK-QAPTSLQFQQTQDVP----NLSPPQSVQNLSALVQRQMLPQGQSQQAFL 1570 QEMRTVD +K QA + LQFQQTQ++P N PPQ +Q Q PQ Q Q FL Sbjct: 449 QEMRTVDPAKAQAASLLQFQQTQNLPNRPANFMPPQMLQ--------QPQPQPQPPQTFL 500 Query: 1569 Q 1567 Q Sbjct: 501 Q 501 Score = 406 bits (1044), Expect = e-110 Identities = 211/320 (65%), Positives = 260/320 (81%), Gaps = 7/320 (2%) Frame = -1 Query: 1317 FSDSNGNLVNTPSVSPLHSLLG-SFSQEETSHLLNLQRNNSVVPSAAWLPKRTGVESLLP 1141 FSDSN N V +P +SPLHSLLG SFSQ+E+S +LNL R N ++ S+ W KR ++ LL Sbjct: 594 FSDSNPNHVTSPIISPLHSLLGGSFSQDESSQMLNLPRTNPMIHSSTWPSKRAAIDPLLS 653 Query: 1140 SG-APCVLPQLDQLGPPQTNGSQHSSGLPPFPGRECSVDQDVSTDPQNHLLFGVNIDSSS 964 SG + VL Q + +G N SQ++ LPPFPGRECS+DQ + DPQ++LLFGVNI+ SS Sbjct: 654 SGNSQFVLSQGENIGTTPANISQNAFSLPPFPGRECSLDQG-NVDPQSNLLFGVNIEPSS 712 Query: 963 LLMQNGMPDLRGVGSETDSTTLPFAASNFLSGGGPDFPLNQSVT--TSSCLDESGFLHSP 790 LLMQNGMP+LRG+ S++DST +PF+ SN+++ G +F N + T S+C ++SGFL SP Sbjct: 713 LLMQNGMPNLRGICSDSDSTAIPFS-SNYVNTAGTNFSANPTGTGTPSNCNEDSGFLQSP 771 Query: 789 DDVGQVNPPTRTFVKVHKTGSFGRSLDITRFSSYHELRSELARMFGLEGQLEDPLRSGWQ 610 ++ GQVNPPTRTFVKV+K+GSFGRSLDI++FSSYH+LRSELA MFGLEG+LEDPLRSGWQ Sbjct: 772 ENTGQVNPPTRTFVKVYKSGSFGRSLDISKFSSYHQLRSELAHMFGLEGELEDPLRSGWQ 831 Query: 609 LVFVDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQQMGKQGLELLNNV--QRLSSGIC 436 LVFVDRENDVLLLGDDPW EFVNSVWCIKILSPQEVQ MGK+GLELLN+V QRLS+G C Sbjct: 832 LVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDMGKRGLELLNSVPIQRLSNGSC 891 Query: 435 DDYVGRQD-SRTMSNGITSV 379 D+Y RQ+ SR M++GITSV Sbjct: 892 DNYANRQESSRNMNSGITSV 911 >ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cucumis sativus] Length = 902 Score = 459 bits (1181), Expect = e-126 Identities = 235/301 (78%), Positives = 251/301 (83%), Gaps = 8/301 (2%) Frame = -1 Query: 2445 DSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLXXXXXXXATNSRFTIFYN 2266 DSV+FIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMH+GLL ATNSRFTIFYN Sbjct: 211 DSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYN 270 Query: 2265 PRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPSRWA 2086 PRASPSEF+IPL KYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLD +RW Sbjct: 271 PRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSTRWP 330 Query: 2085 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGVPSFHVGN 1906 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWP G PSFH Sbjct: 331 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGFPSFHGLK 390 Query: 1905 NDDLGINSPLMWLRGDSGDRG---MNFQGIGAAPWIQPRFDASLLGLQPDMYQAMAAAAL 1735 DDLG+NS LMWLRGD DRG +NF GIG APW+QPR DAS++GLQP++YQAMAAAAL Sbjct: 391 EDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVAPWMQPRLDASMVGLQPEIYQAMAAAAL 450 Query: 1734 QEMRTVDGSK-QAPTSLQFQQTQDVP----NLSPPQSVQNLSALVQRQMLPQGQSQQAFL 1570 QEMRTVD +K QA + LQFQQTQ++P N PPQ +Q Q PQ Q Q FL Sbjct: 451 QEMRTVDPAKAQAASLLQFQQTQNLPNRPANFMPPQMLQ--------QPQPQPQPPQTFL 502 Query: 1569 Q 1567 Q Sbjct: 503 Q 503 Score = 406 bits (1044), Expect = e-110 Identities = 211/320 (65%), Positives = 260/320 (81%), Gaps = 7/320 (2%) Frame = -1 Query: 1317 FSDSNGNLVNTPSVSPLHSLLG-SFSQEETSHLLNLQRNNSVVPSAAWLPKRTGVESLLP 1141 FSDSN N V +P +SPLHSLLG SFSQ+E+S +LNL R N ++ S+ W KR ++ LL Sbjct: 580 FSDSNPNHVTSPIISPLHSLLGGSFSQDESSQMLNLPRTNPMIHSSTWPSKRAAIDPLLS 639 Query: 1140 SG-APCVLPQLDQLGPPQTNGSQHSSGLPPFPGRECSVDQDVSTDPQNHLLFGVNIDSSS 964 SG + VL Q + +G N SQ++ LPPFPGRECS+DQ + DPQ++LLFGVNI+ SS Sbjct: 640 SGNSQFVLSQGENIGTTPANISQNAFSLPPFPGRECSLDQG-NVDPQSNLLFGVNIEPSS 698 Query: 963 LLMQNGMPDLRGVGSETDSTTLPFAASNFLSGGGPDFPLNQSVT--TSSCLDESGFLHSP 790 LLMQNGMP+LRG+ S++DST +PF+ SN+++ G +F N + T S+C ++SGFL SP Sbjct: 699 LLMQNGMPNLRGICSDSDSTAIPFS-SNYVNTAGTNFSANPTGTGTPSNCNEDSGFLQSP 757 Query: 789 DDVGQVNPPTRTFVKVHKTGSFGRSLDITRFSSYHELRSELARMFGLEGQLEDPLRSGWQ 610 ++ GQVNPPTRTFVKV+K+GSFGRSLDI++FSSYH+LRSELA MFGLEG+LEDPLRSGWQ Sbjct: 758 ENTGQVNPPTRTFVKVYKSGSFGRSLDISKFSSYHQLRSELAHMFGLEGELEDPLRSGWQ 817 Query: 609 LVFVDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQQMGKQGLELLNNV--QRLSSGIC 436 LVFVDRENDVLLLGDDPW EFVNSVWCIKILSPQEVQ MGK+GLELLN+V QRLS+G C Sbjct: 818 LVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDMGKRGLELLNSVPIQRLSNGSC 877 Query: 435 DDYVGRQD-SRTMSNGITSV 379 D+Y RQ+ SR M++GITSV Sbjct: 878 DNYANRQESSRNMNSGITSV 897 >dbj|BAD19063.1| auxin response factor 3 [Cucumis sativus] Length = 916 Score = 459 bits (1181), Expect = e-126 Identities = 235/301 (78%), Positives = 251/301 (83%), Gaps = 8/301 (2%) Frame = -1 Query: 2445 DSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLXXXXXXXATNSRFTIFYN 2266 DSV+FIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMH+GLL ATNSRFTIFYN Sbjct: 209 DSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYN 268 Query: 2265 PRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPSRWA 2086 PRASPSEF+IPL KYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLD +RW Sbjct: 269 PRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSTRWP 328 Query: 2085 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGVPSFHVGN 1906 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWP G PSFH Sbjct: 329 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGFPSFHGLK 388 Query: 1905 NDDLGINSPLMWLRGDSGDRG---MNFQGIGAAPWIQPRFDASLLGLQPDMYQAMAAAAL 1735 DDLG+NS LMWLRGD DRG +NF GIG APW+QPR DAS++GLQP++YQAMAAAAL Sbjct: 389 EDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVAPWMQPRLDASMVGLQPEIYQAMAAAAL 448 Query: 1734 QEMRTVDGSK-QAPTSLQFQQTQDVP----NLSPPQSVQNLSALVQRQMLPQGQSQQAFL 1570 QEMRTVD +K QA + LQFQQTQ++P N PPQ +Q Q PQ Q Q FL Sbjct: 449 QEMRTVDPAKAQAASLLQFQQTQNLPNRPANFMPPQMLQ--------QPQPQPQPPQTFL 500 Query: 1569 Q 1567 Q Sbjct: 501 Q 501 Score = 407 bits (1045), Expect = e-111 Identities = 211/320 (65%), Positives = 260/320 (81%), Gaps = 7/320 (2%) Frame = -1 Query: 1317 FSDSNGNLVNTPSVSPLHSLLG-SFSQEETSHLLNLQRNNSVVPSAAWLPKRTGVESLLP 1141 FSDSN N V +P +SPLHSLLG SFSQ+E+S +LNL RNN ++ S+ W KR ++ LL Sbjct: 594 FSDSNPNHVTSPIISPLHSLLGGSFSQDESSQMLNLPRNNPMIHSSTWPSKRAAIDPLLS 653 Query: 1140 SG-APCVLPQLDQLGPPQTNGSQHSSGLPPFPGRECSVDQDVSTDPQNHLLFGVNIDSSS 964 SG + VL Q + +G N SQ++ LPPFPGRECS+DQ + DPQ++LLFGVNI+ SS Sbjct: 654 SGNSQFVLSQGENIGTTPANISQNAFTLPPFPGRECSLDQG-NVDPQSNLLFGVNIEPSS 712 Query: 963 LLMQNGMPDLRGVGSETDSTTLPFAASNFLSGGGPDFPLNQSVT--TSSCLDESGFLHSP 790 LLMQNGMP+LRG+ S++DST +PF+ SN+++ G +F N + T S+C ++SGFLHSP Sbjct: 713 LLMQNGMPNLRGICSDSDSTAIPFS-SNYVNTAGTNFSANPTGTGTPSNCNEDSGFLHSP 771 Query: 789 DDVGQVNPPTRTFVKVHKTGSFGRSLDITRFSSYHELRSELARMFGLEGQLEDPLRSGWQ 610 ++ GQVNPPT TFVKV+K+GSFGRSLDI++FS YH+LRSELA MFGLEG+LEDPLRSGWQ Sbjct: 772 ENTGQVNPPTTTFVKVYKSGSFGRSLDISKFSRYHQLRSELAHMFGLEGELEDPLRSGWQ 831 Query: 609 LVFVDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQQMGKQGLELLNNV--QRLSSGIC 436 LVFVDRENDVLLLGDDPW EFVNSVWCIKILSPQEVQ MGK+GLELLN+V QRLS+G C Sbjct: 832 LVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDMGKRGLELLNSVPIQRLSNGSC 891 Query: 435 DDYVGRQD-SRTMSNGITSV 379 D+Y RQ+ SR M++GITSV Sbjct: 892 DNYANRQESSRNMNSGITSV 911