BLASTX nr result

ID: Coptis24_contig00005526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005526
         (1315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632718.1| PREDICTED: uncharacterized protein LOC100855...   136   8e-40
ref|XP_002525420.1| conserved hypothetical protein [Ricinus comm...   114   3e-34
ref|XP_002325841.1| predicted protein [Populus trichocarpa] gi|2...   114   7e-34
ref|XP_002319159.1| predicted protein [Populus trichocarpa] gi|2...   105   2e-29
ref|NP_001239693.1| uncharacterized protein LOC100810509 [Glycin...    93   3e-26

>ref|XP_003632718.1| PREDICTED: uncharacterized protein LOC100855285 [Vitis vinifera]
          Length = 290

 Score =  136 bits (342), Expect(2) = 8e-40
 Identities = 102/254 (40%), Positives = 117/254 (46%), Gaps = 2/254 (0%)
 Frame = -2

Query: 927 KGVFDMDYFTYHSPKSRRKVEKTKNSSVSRDVKQLSPIQVHXXXXXXXXXXXXXXXXXXX 748
           KGVFDM+YF   +PK    VE    S   R  KQL P+Q+                    
Sbjct: 35  KGVFDMNYFICPTPKRETWVEPPPLSP--RLPKQLLPLQIRLDPPPIVDEEVVKHITKIP 92

Query: 747 XETSKLSPVNNSEKPNLTLGE-DQEMISQHVFFKKMKENEFVDIKMDSPKSGGRGIKAQT 571
            +   L P          L E DQ+ +SQ VFFKKMKENEFVD+KMDSPKSG RGI  Q 
Sbjct: 93  LQIEALPPPVIRVPSLEALKEADQDTVSQ-VFFKKMKENEFVDMKMDSPKSGSRGILPQI 151

Query: 570 EAESFQFXXXXXXXXXXXDMGNKASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 391
           EA  FQF           +   K +                                   
Sbjct: 152 EAGGFQFEEKDEKMENTHNPSKKNNLGPAPGPDIKED----------------------- 188

Query: 390 XXKEVIKWEESRGGFNFLNWGLSGIGALCSLGMAAATICIFILGSQQRHK-HQQNQKLRF 214
              E   W ES G FN   W L+GIGALCS G+AA TICI I  S QR+K HQ NQ+LRF
Sbjct: 189 ---EEGSWTESSGRFNVWKWSLTGIGALCSFGVAATTICIIIFASSQRNKHHQHNQRLRF 245

Query: 213 QIYADDNKRFKQVV 172
           QI  DD KR K+VV
Sbjct: 246 QIITDD-KRIKRVV 258



 Score = 55.5 bits (132), Expect(2) = 8e-40
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -1

Query: 118 RFKQVVHHASKLNQAILSVRGVPFNRAHITSGGYY 14
           R K+VVHHA++LN+A  +VRGVP  RAHIT GGYY
Sbjct: 253 RIKRVVHHATQLNEAFSAVRGVPLTRAHITFGGYY 287


>ref|XP_002525420.1| conserved hypothetical protein [Ricinus communis]
           gi|223535233|gb|EEF36910.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 293

 Score =  114 bits (286), Expect(2) = 3e-34
 Identities = 79/185 (42%), Positives = 95/185 (51%), Gaps = 7/185 (3%)
 Frame = -2

Query: 705 PNLTLGE-DQEMISQHVFFKKMKENEFVDIKMDSPKSGGRGIKA----QTEAESFQFXXX 541
           P+  L E DQ+ ISQ VFFKKM EN+FVD+KMDSP+S  +G       Q +A  F F   
Sbjct: 103 PDKALKEADQDPISQ-VFFKKMTENKFVDMKMDSPESPTKGFVPPPLPQIDAGKFNFEDR 161

Query: 540 XXXXXXXXDMGNKASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEVIKWEE 361
                   ++  K S+                                     E   WE+
Sbjct: 162 SETFIKGENLEAKISSPRIKNEKDINEEV------------------------EEGNWED 197

Query: 360 SRGGFNFLNWGLSGIGALCSLGMAAATICIFILGSQQRHK--HQQNQKLRFQIYADDNKR 187
           S GG N   W L+GIGA+CS G+AAAT+CI I GS QR+K   QQNQKLRFQIY DD KR
Sbjct: 198 SSGGLNLWKWSLNGIGAICSFGVAAATVCIIIFGSHQRNKQQQQQNQKLRFQIYTDD-KR 256

Query: 186 FKQVV 172
            KQVV
Sbjct: 257 IKQVV 261



 Score = 58.5 bits (140), Expect(2) = 3e-34
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = -1

Query: 118 RFKQVVHHASKLNQAILSVRGVPFNRAHITSGGYY 14
           R KQVVHHA++LN+AI +VRGVP  RAHIT GGYY
Sbjct: 256 RIKQVVHHATRLNEAITAVRGVPIARAHITYGGYY 290


>ref|XP_002325841.1| predicted protein [Populus trichocarpa] gi|222862716|gb|EEF00223.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score =  114 bits (284), Expect(2) = 7e-34
 Identities = 90/261 (34%), Positives = 120/261 (45%), Gaps = 9/261 (3%)
 Frame = -2

Query: 927 KGVFDMDYFTYHS--PKSRRKVEKTKNSSVSRDVKQLSPIQVHXXXXXXXXXXXXXXXXX 754
           K +FDM+YF   S  PK  R V             QL P+ +                  
Sbjct: 38  KAMFDMNYFMCPSSPPKHSRVVPN-----------QLVPVHIQLEPPTKTSKDVPEDHVI 86

Query: 753 XXXETSKLSPVNNSEK-PNLTLGE----DQEMISQHVFFKKMKENEFVDIKMDSPKSGG- 592
              +   + P++ S   P++T+ E    DQ+ +SQ VFFKKMKENEFVD+K+DSPKS   
Sbjct: 87  SKKDVVSMVPIDLSAVVPSVTMPEVKEADQDSVSQ-VFFKKMKENEFVDMKLDSPKSSNT 145

Query: 591 RGIKAQTEAESFQFXXXXXXXXXXXDMGNKASTXXXXXXXXXXXXXXXXXXXXXXXXXXX 412
           +G  A  + ++                G++                              
Sbjct: 146 KGGFAPPQIDAGSTFNFEDKSDHQGYTGDQV------------------LETTKISSPRI 187

Query: 411 XXXXXXXXXKEVIKWEESRGGFNFLNWGLSGIGALCSLGMAAATICIFILGSQQRHK-HQ 235
                    K+ + WEE+  G N     L+GIGA+C+ G+AAATICIFI G+QQR+K  Q
Sbjct: 188 KSTENENSTKKEVNWEENSSGLNLWKLSLTGIGAICTFGVAAATICIFIFGNQQRNKQQQ 247

Query: 234 QNQKLRFQIYADDNKRFKQVV 172
           QNQKL FQIY DD KR KQVV
Sbjct: 248 QNQKLSFQIYTDD-KRIKQVV 267



 Score = 57.8 bits (138), Expect(2) = 7e-34
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -1

Query: 118 RFKQVVHHASKLNQAILSVRGVPFNRAHITSGGYY 14
           R KQVVHHA+KLN+AI + RGVP  RAHIT GGYY
Sbjct: 262 RIKQVVHHATKLNEAISAARGVPIARAHITYGGYY 296


>ref|XP_002319159.1| predicted protein [Populus trichocarpa] gi|222857535|gb|EEE95082.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score =  105 bits (263), Expect(2) = 2e-29
 Identities = 75/176 (42%), Positives = 91/176 (51%), Gaps = 5/176 (2%)
 Frame = -2

Query: 684 DQEMISQHVFFKKMKENEFVDIKMDSPKSG---GRGIKAQTEA-ESFQFXXXXXXXXXXX 517
           DQ+ +SQ VFFKKMKENEFVD+K+DSPKS    G  +  Q +A  +F F           
Sbjct: 115 DQDSVSQ-VFFKKMKENEFVDMKLDSPKSSSSKGGFVPPQIDAGPTFNFEDQSDHQGFKG 173

Query: 516 DMGNKASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEVIKWEESRGGFNFL 337
           D    A+                                     K  ++WEE+ GG N  
Sbjct: 174 DRELDATKISSPRIKSTGKESGT---------------------KGEVRWEENGGGLNLW 212

Query: 336 NWGLSGIGALCSLGMAAATICIFILGSQQRHK-HQQNQKLRFQIYADDNKRFKQVV 172
              L+GIGA+CS G+AAATICIFI GS QR+K  QQNQK  FQIY DD KR +QVV
Sbjct: 213 KLSLTGIGAICSFGVAAATICIFIFGSHQRNKQQQQNQKPSFQIYTDD-KRIEQVV 267



 Score = 50.8 bits (120), Expect(2) = 2e-29
 Identities = 23/35 (65%), Positives = 27/35 (77%)
 Frame = -1

Query: 118 RFKQVVHHASKLNQAILSVRGVPFNRAHITSGGYY 14
           R +QVVHHA+K+N AI   RGVP  RAHIT GGY+
Sbjct: 262 RIEQVVHHATKMNGAISVARGVPIARAHITYGGYH 296


>ref|NP_001239693.1| uncharacterized protein LOC100810509 [Glycine max]
           gi|255636513|gb|ACU18595.1| unknown [Glycine max]
          Length = 268

 Score = 92.8 bits (229), Expect(2) = 3e-26
 Identities = 77/271 (28%), Positives = 114/271 (42%), Gaps = 16/271 (5%)
 Frame = -2

Query: 936 LGVKGVFDMDYFTYHSPKSR-------------RKVEKTKNSSVSRDVKQLSPIQVHXXX 796
           L  +G+FDMDYF    P  R              K+ K     + +D+ + SP++V    
Sbjct: 34  LDSEGIFDMDYFCSSPPPPRVRTQLVPLPIQLEPKIGKAPEDILVKDIIKSSPMEV---- 89

Query: 795 XXXXXXXXXXXXXXXXXETSKLSPVNNSEKPNLTLGEDQEMISQHVFFKKMKENEFVDIK 616
                              +  +P  N+++      E  E     VFFK  +++EFVD+K
Sbjct: 90  -------------------AIATPSENTKE-----FETVEADRVKVFFKIKEKSEFVDMK 125

Query: 615 MD--SPKSGGRGIKAQTEAESFQFXXXXXXXXXXXDMGNKASTXXXXXXXXXXXXXXXXX 442
               +P      +K + + E+ +            D+ +K                    
Sbjct: 126 RGILAPMDAAGSLKFEDKGEAMEIITSPRRRVIEKDVCDK-------------------- 165

Query: 441 XXXXXXXXXXXXXXXXXXXKEVIKWEE-SRGGFNFLNWGLSGIGALCSLGMAAATICIFI 265
                              +E   WEE +  GFN   W L+G+GA+CS G+AAATIC+  
Sbjct: 166 -------------------EEESTWEEDNNSGFNLWKWSLTGVGAICSFGVAAATICVLF 206

Query: 264 LGSQQRHKHQQNQKLRFQIYADDNKRFKQVV 172
            GSQQR+K +Q+QK+RFQIY DD KR KQVV
Sbjct: 207 FGSQQRNKLKQDQKIRFQIYTDD-KRIKQVV 236



 Score = 53.5 bits (127), Expect(2) = 3e-26
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = -1

Query: 118 RFKQVVHHASKLNQAILSVRGVPFNRAHITSGGYY 14
           R KQVV HA+KLN AI + RGVP +RAHI+ GGYY
Sbjct: 231 RIKQVVQHATKLNDAISAARGVPMSRAHISVGGYY 265


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