BLASTX nr result

ID: Coptis24_contig00005520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005520
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327305.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-40
ref|XP_002325938.1| predicted protein [Populus trichocarpa] gi|2...   153   8e-35
ref|XP_002525504.1| conserved hypothetical protein [Ricinus comm...   150   4e-34
emb|CBI31246.3| unnamed protein product [Vitis vinifera]              149   2e-33
ref|XP_002274203.1| PREDICTED: uncharacterized protein LOC100241...   149   2e-33

>ref|XP_002327305.1| predicted protein [Populus trichocarpa] gi|222835675|gb|EEE74110.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  172 bits (435), Expect = 2e-40
 Identities = 108/302 (35%), Positives = 150/302 (49%), Gaps = 46/302 (15%)
 Frame = -2

Query: 963 APREFQDWELLHNKETGLLLPP-------DSFVDIEGVSEGVIRSDYFAFDSENRYGKTI 805
           A  +FQDWELL N ++ L+  P        SF +I   +EG+ R DYF+ +++NRY KT 
Sbjct: 7   AVTDFQDWELLANSDSDLVNSPISVADSSRSFEEIVADTEGMFRLDYFSLENDNRYVKTT 66

Query: 804 XXXXXXXXXXXXXXXDNPSWIEPCSESTMFIXXXXXDQRVELRRKVXXXXXXXXXXXXXX 625
                           NPSWI+P SE+           R + R  V              
Sbjct: 67  LDATDEGSVESD----NPSWIDPGSET-----------RFQRRNSVEFWPDSGSDRSDD- 110

Query: 624 XSRKFIEFDGNEEMG---------------------------------------NRSGSV 562
             RK  +FD   E+G                                       N S  V
Sbjct: 111 --RKLGDFDVKNELGVVENERTDFWSDSGGDDLFSGDVGKDQVGSEILGESEGENESKDV 168

Query: 561 DXXXXXXXXXXXXXXXXXXEMVWWKFPFEILKFCLFKVSPGWTISIAAAVMGIVILRRRL 382
           +                  ++V WK PFE+L++C+F+ SP W++S+AAAVMG VIL RRL
Sbjct: 169 NLSVVAVGETKPGDEVEKRKVVLWKVPFEMLRYCVFRFSPVWSVSVAAAVMGFVILGRRL 228

Query: 381 HRMKKKNQSIALKLTVDDKKVSQLMNRSTRLNEAFSVVRNVPMIRPLLPSPGLTPWPILN 202
           ++MK+K +S+ LK+TVDDKKVS  M+R+ RLNE FSVVR VP++RPLLP+ G+ PWP+++
Sbjct: 229 YKMKRKTKSLQLKVTVDDKKVSHFMSRAARLNETFSVVRRVPIVRPLLPAAGVNPWPVMS 288

Query: 201 LR 196
           LR
Sbjct: 289 LR 290


>ref|XP_002325938.1| predicted protein [Populus trichocarpa] gi|222862813|gb|EEF00320.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  153 bits (386), Expect = 8e-35
 Identities = 65/102 (63%), Positives = 91/102 (89%)
 Frame = -2

Query: 501 MVWWKFPFEILKFCLFKVSPGWTISIAAAVMGIVILRRRLHRMKKKNQSIALKLTVDDKK 322
           +VWWK PFE+L++C+F+++P W++S+AAAVMG VIL RRL++M++K +S+ LK+TVDDKK
Sbjct: 201 VVWWKVPFEVLRYCVFRLNPVWSVSMAAAVMGFVILGRRLYKMRRKTKSLQLKVTVDDKK 260

Query: 321 VSQLMNRSTRLNEAFSVVRNVPMIRPLLPSPGLTPWPILNLR 196
           VSQ M R+TRLNEAFSVVR VP++RPLLP+ G+ PWP+++LR
Sbjct: 261 VSQFMTRATRLNEAFSVVRRVPIVRPLLPAAGVNPWPVMSLR 302


>ref|XP_002525504.1| conserved hypothetical protein [Ricinus communis]
           gi|223535183|gb|EEF36862.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 325

 Score =  150 bits (380), Expect = 4e-34
 Identities = 66/102 (64%), Positives = 88/102 (86%)
 Frame = -2

Query: 501 MVWWKFPFEILKFCLFKVSPGWTISIAAAVMGIVILRRRLHRMKKKNQSIALKLTVDDKK 322
           +VWWK PFE+L++C+F++SP WT S+AAAVMG VIL RRL++MK+K +S+ LK+TVDDKK
Sbjct: 224 VVWWKVPFELLRYCVFRISPVWTFSMAAAVMGFVILGRRLYKMKRKTRSLPLKVTVDDKK 283

Query: 321 VSQLMNRSTRLNEAFSVVRNVPMIRPLLPSPGLTPWPILNLR 196
           VSQ M+R+ RLNEAFSVVR VP++RPLLP+ G+  WP++ LR
Sbjct: 284 VSQFMSRAARLNEAFSVVRRVPIVRPLLPAGGVNSWPVMTLR 325



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
 Frame = -2

Query: 975 MEEEAPREFQDWELLHNKETGLLLPPDS------FVDIEGVSEGVIRSDYFAFDSENRYG 814
           ME E   EFQDWELL N +T ++  P+S        +IE  SEGV+R DYF+ ++++RY 
Sbjct: 1   MEGEVSGEFQDWELLVNSDTDMVHSPNSVNNSRNLEEIEADSEGVLRLDYFSLENDSRYA 60

Query: 813 KTIXXXXXXXXXXXXXXXDNPSWIEPCSES 724
           KT                DNPSWI+P  E+
Sbjct: 61  KT--AAVVDASDEGSVESDNPSWIDPGPET 88


>emb|CBI31246.3| unnamed protein product [Vitis vinifera]
          Length = 132

 Score =  149 bits (375), Expect = 2e-33
 Identities = 65/102 (63%), Positives = 87/102 (85%)
 Frame = -2

Query: 501 MVWWKFPFEILKFCLFKVSPGWTISIAAAVMGIVILRRRLHRMKKKNQSIALKLTVDDKK 322
           +VWWK P E  ++C F+VSP W+ S+AAA++GIVIL RRL+RMK+K++S+ LK+TVDDKK
Sbjct: 31  VVWWKVPLEFFRYCAFRVSPVWSFSVAAAILGIVILGRRLYRMKRKSRSLQLKVTVDDKK 90

Query: 321 VSQLMNRSTRLNEAFSVVRNVPMIRPLLPSPGLTPWPILNLR 196
           VSQ M+R+ RLNEAFSVVR VP+IRP LP+ G+ PWP+++LR
Sbjct: 91  VSQFMSRAARLNEAFSVVRRVPIIRPALPAAGVNPWPVMSLR 132


>ref|XP_002274203.1| PREDICTED: uncharacterized protein LOC100241424 [Vitis vinifera]
          Length = 415

 Score =  149 bits (375), Expect = 2e-33
 Identities = 65/102 (63%), Positives = 87/102 (85%)
 Frame = -2

Query: 501 MVWWKFPFEILKFCLFKVSPGWTISIAAAVMGIVILRRRLHRMKKKNQSIALKLTVDDKK 322
           +VWWK P E  ++C F+VSP W+ S+AAA++GIVIL RRL+RMK+K++S+ LK+TVDDKK
Sbjct: 314 VVWWKVPLEFFRYCAFRVSPVWSFSVAAAILGIVILGRRLYRMKRKSRSLQLKVTVDDKK 373

Query: 321 VSQLMNRSTRLNEAFSVVRNVPMIRPLLPSPGLTPWPILNLR 196
           VSQ M+R+ RLNEAFSVVR VP+IRP LP+ G+ PWP+++LR
Sbjct: 374 VSQFMSRAARLNEAFSVVRRVPIIRPALPAAGVNPWPVMSLR 415



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
 Frame = -2

Query: 975 MEEEAPREFQDWELLHNKETGLLLPPDS------FVDIEGVSEGVIRSDYFAFDSENRYG 814
           MEE    + QDWELLH  ++ L++ P S         IEG SEG+IRSDYF+ DS+ RY 
Sbjct: 1   MEESV--DLQDWELLHGSDSELVISPVSAQKLSELEGIEGDSEGMIRSDYFSLDSQGRYE 58

Query: 813 KTIXXXXXXXXXXXXXXXDNPSWIEPCSES 724
           + +               DNPSWI+P  E+
Sbjct: 59  RPV-----DVSEEGSIESDNPSWIDPGLET 83


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