BLASTX nr result
ID: Coptis24_contig00005503
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005503
(2182 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI25354.3| unnamed protein product [Vitis vinifera] 367 5e-99
ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 6... 367 5e-99
emb|CAN61689.1| hypothetical protein VITISV_024206 [Vitis vinifera] 359 2e-96
ref|XP_004169317.1| PREDICTED: U-box domain-containing protein 6... 319 2e-84
ref|XP_004146472.1| PREDICTED: U-box domain-containing protein 6... 319 2e-84
>emb|CBI25354.3| unnamed protein product [Vitis vinifera]
Length = 384
Score = 367 bits (943), Expect = 5e-99
Identities = 193/284 (67%), Positives = 217/284 (76%), Gaps = 4/284 (1%)
Frame = +3
Query: 678 KQSSSLGSSRGVLMKDGNNVNGVHSANNIRGSCSSGQHHQQGRVNHFENAVSIAEPD--L 851
K SS GS+R VLMKDG V +SA S ++H+QGR++H++NAV+IAEPD +
Sbjct: 106 KDHSSFGSNRDVLMKDGAIVLSTNSAR-----ASPSENHRQGRISHYQNAVTIAEPDGDM 160
Query: 852 YYSQFLQGPEGSALAQKEIGGENGCGFSSGKEASLSVESGEPLRTILSDPITGTLMDDAM 1031
YYSQFLQGPEGSA QKE+ ENGCGFS K+ SLS ESGE L+ ILSDP+TG LMDDAM
Sbjct: 161 YYSQFLQGPEGSAPGQKELAVENGCGFSGRKDVSLSTESGESLKAILSDPLTGALMDDAM 220
Query: 1032 ILPCGHSFGSGGLQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREEELSSCRASK 1211
ILPCGHSFG GG+QHV KMK C TC Q +EDSV PNLSLR+A+ AFRREEEL R SK
Sbjct: 221 ILPCGHSFGGGGMQHVIKMKACSTCSQPFSEDSVQPNLSLRAAVQAFRREEELQVYRTSK 280
Query: 1212 KRRERFEQDKSSCGDLS-MYFSRGKGVQFPFAVTDRVVIKGNKRTPLRFVGREAVVTTQC 1388
+RRER +QDK S GD + M RG+GVQFPFAVTDRV+IKGNKRTP RFVGREAVVTTQC
Sbjct: 281 RRRERSDQDKCSYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQC 340
Query: 1389 LNGWYVVKTLDNAESVKLQYRSLAKV-XXXXXXXXXXXXXPNWL 1517
LNGWYVVKTLDNAESVKLQYRSLAKV PNWL
Sbjct: 341 LNGWYVVKTLDNAESVKLQYRSLAKVPDNPSSKPMLSKMTPNWL 384
>ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 62-like [Vitis vinifera]
Length = 441
Score = 367 bits (943), Expect = 5e-99
Identities = 193/284 (67%), Positives = 217/284 (76%), Gaps = 4/284 (1%)
Frame = +3
Query: 678 KQSSSLGSSRGVLMKDGNNVNGVHSANNIRGSCSSGQHHQQGRVNHFENAVSIAEPD--L 851
K SS GS+R VLMKDG V +SA S ++H+QGR++H++NAV+IAEPD +
Sbjct: 163 KDHSSFGSNRDVLMKDGAIVLSTNSAR-----ASPSENHRQGRISHYQNAVTIAEPDGDM 217
Query: 852 YYSQFLQGPEGSALAQKEIGGENGCGFSSGKEASLSVESGEPLRTILSDPITGTLMDDAM 1031
YYSQFLQGPEGSA QKE+ ENGCGFS K+ SLS ESGE L+ ILSDP+TG LMDDAM
Sbjct: 218 YYSQFLQGPEGSAPGQKELAVENGCGFSGRKDVSLSTESGESLKAILSDPLTGALMDDAM 277
Query: 1032 ILPCGHSFGSGGLQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREEELSSCRASK 1211
ILPCGHSFG GG+QHV KMK C TC Q +EDSV PNLSLR+A+ AFRREEEL R SK
Sbjct: 278 ILPCGHSFGGGGMQHVIKMKACSTCSQPFSEDSVQPNLSLRAAVQAFRREEELQVYRTSK 337
Query: 1212 KRRERFEQDKSSCGDLS-MYFSRGKGVQFPFAVTDRVVIKGNKRTPLRFVGREAVVTTQC 1388
+RRER +QDK S GD + M RG+GVQFPFAVTDRV+IKGNKRTP RFVGREAVVTTQC
Sbjct: 338 RRRERSDQDKCSYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQC 397
Query: 1389 LNGWYVVKTLDNAESVKLQYRSLAKV-XXXXXXXXXXXXXPNWL 1517
LNGWYVVKTLDNAESVKLQYRSLAKV PNWL
Sbjct: 398 LNGWYVVKTLDNAESVKLQYRSLAKVPDNPSSKPMLSKMTPNWL 441
Score = 95.1 bits (235), Expect = 7e-17
Identities = 46/77 (59%), Positives = 59/77 (76%)
Frame = +3
Query: 171 TEQI*LVKEQRMENGLNSQLVFQDETLQFNCGASPQRRIVENGRKGREMSGFVTEKMFSI 350
+E++ V QR+ENGLNSQLVFQDE L+FNCGA PQRR+ + G K RE+S F+ EKMF +
Sbjct: 3 SEEVGFVPPQRLENGLNSQLVFQDEALRFNCGA-PQRRVGDPGPKTRELSSFIDEKMFCV 61
Query: 351 EGERYFGTQSSEFRRNM 401
E +RYF Q EFRR++
Sbjct: 62 ERDRYFHPQGGEFRRSI 78
>emb|CAN61689.1| hypothetical protein VITISV_024206 [Vitis vinifera]
Length = 452
Score = 359 bits (921), Expect = 2e-96
Identities = 193/295 (65%), Positives = 217/295 (73%), Gaps = 15/295 (5%)
Frame = +3
Query: 678 KQSSSLGSSRGVLMKDGNNVNGVHSANNIRGSCSSGQHHQQGRVNHFENAVSIAEPD--L 851
K SS GS+R VLMKDG V +SA S ++H+QGR++H++NAV+IAEPD +
Sbjct: 163 KDHSSFGSNRDVLMKDGAIVLSTNSAR-----ASPSENHRQGRISHYQNAVTIAEPDGDM 217
Query: 852 YYSQFLQGPEGSALAQKEIGGENGCGFSSGKEASLSVESGEPLRTILSDPITGTLMDDAM 1031
YYSQFLQGPEGSA QKE+ ENGCGFS K+ SLS ESGE L+ ILSDP+TG LMDDAM
Sbjct: 218 YYSQFLQGPEGSAPGQKELAVENGCGFSGRKDVSLSTESGESLKAILSDPLTGALMDDAM 277
Query: 1032 ILPCGHSFGSGGLQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREEELSSCRASK 1211
ILPCGHSFG GG+QHV KMK C TC Q +EDSV PNLSLR+A+ AFRREEEL R SK
Sbjct: 278 ILPCGHSFGGGGMQHVIKMKACSTCSQPFSEDSVQPNLSLRAAVQAFRREEELQVYRTSK 337
Query: 1212 KRRERFEQDKSSCGDLS-MYFSRGKGVQFPFAVTDRVVIK-----------GNKRTPLRF 1355
+RRER +QDK S GD + M RG+GVQFPFAVTDRV+IK GNKRTP RF
Sbjct: 338 RRRERSDQDKCSYGDSTLMDTPRGRGVQFPFAVTDRVIIKLQLTIREKMDQGNKRTPQRF 397
Query: 1356 VGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKV-XXXXXXXXXXXXXPNWL 1517
VGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKV PNWL
Sbjct: 398 VGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPDNPSSKPMLSKMTPNWL 452
Score = 95.1 bits (235), Expect = 7e-17
Identities = 46/77 (59%), Positives = 59/77 (76%)
Frame = +3
Query: 171 TEQI*LVKEQRMENGLNSQLVFQDETLQFNCGASPQRRIVENGRKGREMSGFVTEKMFSI 350
+E++ V QR+ENGLNSQLVFQDE L+FNCGA PQRR+ + G K RE+S F+ EKMF +
Sbjct: 3 SEEVGFVPPQRLENGLNSQLVFQDEALRFNCGA-PQRRVGDPGPKTRELSSFIDEKMFCV 61
Query: 351 EGERYFGTQSSEFRRNM 401
E +RYF Q EFRR++
Sbjct: 62 ERDRYFHPQGGEFRRSI 78
>ref|XP_004169317.1| PREDICTED: U-box domain-containing protein 62-like [Cucumis sativus]
Length = 380
Score = 319 bits (818), Expect = 2e-84
Identities = 173/293 (59%), Positives = 209/293 (71%), Gaps = 9/293 (3%)
Frame = +3
Query: 666 ANLQKQSSSLGSSRGVLMKDGNNVNGVHSA---NNIRGSC--SSGQHHQQGRVNHFENAV 830
+N + S G + K GN HS+ + + GS + +++ QGR+ ++ NAV
Sbjct: 89 SNNDRSDQSSGGLKNGTDKLGNGKRKQHSSFVKDALAGSSGVTQSENNPQGRLGNYPNAV 148
Query: 831 SIAEPD--LYYSQFLQGPEGSALAQKEIGGENGCGFSSGKEASLSVESGEPLRTILSDPI 1004
+ AEPD YYSQ+LQ EGSA QK++ ENGCGF ++ S S E E LR IL+DP+
Sbjct: 149 TAAEPDSEAYYSQYLQSNEGSASEQKDLSIENGCGFGR-RDVSFSGEPRESLRAILTDPV 207
Query: 1005 TGTLMDDAMILPCGHSFGSGGLQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREE 1184
TG LMDDAMILPCGHSFGSGG+QHV ++K CY+C QSV+EDS+A NLSL++A+ AFRREE
Sbjct: 208 TGALMDDAMILPCGHSFGSGGIQHVLRLKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREE 267
Query: 1185 ELSSCRASKKRRERFEQDKSSCGDLS-MYFSRGKGVQFPFAVTDRVVIKGNKRTPLRFVG 1361
EL + K+RRERFEQ+K GDL+ M RG+GVQFPFAVTDRV+IKGNKRTP RFVG
Sbjct: 268 ELLFYHSPKRRRERFEQEKGGYGDLTLMDTQRGRGVQFPFAVTDRVIIKGNKRTPQRFVG 327
Query: 1362 REAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKV-XXXXXXXXXXXXXPNWL 1517
REAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKV PNWL
Sbjct: 328 REAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVQNDATSKMITRKMMPNWL 380
>ref|XP_004146472.1| PREDICTED: U-box domain-containing protein 62-like [Cucumis sativus]
Length = 379
Score = 319 bits (818), Expect = 2e-84
Identities = 173/293 (59%), Positives = 209/293 (71%), Gaps = 9/293 (3%)
Frame = +3
Query: 666 ANLQKQSSSLGSSRGVLMKDGNNVNGVHSA---NNIRGSC--SSGQHHQQGRVNHFENAV 830
+N + S G + K GN HS+ + + GS + +++ QGR+ ++ NAV
Sbjct: 88 SNNDRSDQSSGGLKNGTDKLGNGKRKQHSSFVKDALAGSSGVTQSENNPQGRLGNYPNAV 147
Query: 831 SIAEPD--LYYSQFLQGPEGSALAQKEIGGENGCGFSSGKEASLSVESGEPLRTILSDPI 1004
+ AEPD YYSQ+LQ EGSA QK++ ENGCGF ++ S S E E LR IL+DP+
Sbjct: 148 TAAEPDSEAYYSQYLQSNEGSASEQKDLSIENGCGFGR-RDVSFSGEPRESLRAILTDPV 206
Query: 1005 TGTLMDDAMILPCGHSFGSGGLQHVFKMKVCYTCQQSVTEDSVAPNLSLRSAILAFRREE 1184
TG LMDDAMILPCGHSFGSGG+QHV ++K CY+C QSV+EDS+A NLSL++A+ AFRREE
Sbjct: 207 TGALMDDAMILPCGHSFGSGGIQHVLRLKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREE 266
Query: 1185 ELSSCRASKKRRERFEQDKSSCGDLS-MYFSRGKGVQFPFAVTDRVVIKGNKRTPLRFVG 1361
EL + K+RRERFEQ+K GDL+ M RG+GVQFPFAVTDRV+IKGNKRTP RFVG
Sbjct: 267 ELLFYHSPKRRRERFEQEKGGYGDLTLMDTQRGRGVQFPFAVTDRVIIKGNKRTPQRFVG 326
Query: 1362 REAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKV-XXXXXXXXXXXXXPNWL 1517
REAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKV PNWL
Sbjct: 327 REAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVQNDATSKMITRKMMPNWL 379