BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005498
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like...   218   2e-54
ref|XP_002510805.1| conserved hypothetical protein [Ricinus comm...   212   6e-53
ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like...   199   4e-49
ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like...   199   7e-49
ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago...   194   2e-47

>ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera]
           gi|297741051|emb|CBI31782.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score =  218 bits (554), Expect = 2e-54
 Identities = 100/152 (65%), Positives = 122/152 (80%)
 Frame = +2

Query: 8   QKNIDEKDMQKDHQFIKVIDAYLKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWP 187
           + NI+  +     +F++VIDAYLKPKCHS DS+ VHR L   PF+R+E QK+C+Q F WP
Sbjct: 277 EMNINGSEHSSQREFLRVIDAYLKPKCHSADSDAVHRALALLPFQRTEAQKICAQLFEWP 336

Query: 188 SEKTDEYILPKISERDLRRFAILRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCF 367
            EKTDEYILPKI+ERDLRRFA LRSTSS  G+  PL EIPV CPIS IIK R VQG +CF
Sbjct: 337 PEKTDEYILPKIAERDLRRFANLRSTSSNLGIHFPLHEIPVKCPISGIIKHRKVQGRECF 396

Query: 368 EVAWKEYDGLKSSVVPADLIECACPEKIVEFE 463
           EV+W+E+DGLKSS++PA+L++ ACPEKIVEFE
Sbjct: 397 EVSWEEFDGLKSSIIPAELVKSACPEKIVEFE 428


>ref|XP_002510805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549920|gb|EEF51407.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 586

 Score =  212 bits (540), Expect = 6e-53
 Identities = 100/151 (66%), Positives = 124/151 (82%)
 Frame = +2

Query: 14  NIDEKDMQKDHQFIKVIDAYLKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSE 193
           N  +K  ++ +QF++VIDAYLKPKCHS DS+ V+RVL   PF+ ++LQ+LC++FFGW SE
Sbjct: 275 NGSDKISERQNQFLQVIDAYLKPKCHSADSDTVYRVLAQPPFQCAKLQQLCARFFGWSSE 334

Query: 194 KTDEYILPKISERDLRRFAILRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEV 373
            TDEYILPKI+ERDLRRF+ LRSTSS+ GV L L EIPV CP+S IIK R VQG KCFEV
Sbjct: 335 ITDEYILPKIAERDLRRFSNLRSTSSKLGVNLTLHEIPVKCPVSGIIKHRKVQGRKCFEV 394

Query: 374 AWKEYDGLKSSVVPADLIECACPEKIVEFEE 466
            W+ +DGL++S+VPADL+E ACPEKI EFEE
Sbjct: 395 LWEGFDGLETSIVPADLVESACPEKIAEFEE 425


>ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like [Cucumis sativus]
          Length = 563

 Score =  199 bits (507), Expect = 4e-49
 Identities = 124/277 (44%), Positives = 153/277 (55%), Gaps = 29/277 (10%)
 Frame = +2

Query: 32   MQKDHQFIKVIDAYLKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSEKTDEYI 211
            M K  +F +VIDAYLKPKCHS DSE V RVL  HPF+  +LQ++C++FF W  EKTDE I
Sbjct: 272  MLKCDEFSEVIDAYLKPKCHSADSEAVTRVLDQHPFQHVKLQQICAEFFEWSPEKTDENI 331

Query: 212  LPKISERDLRRFAILRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEVAWKEYD 391
            LPKI+ERDLRRFA +RS +SE G  +PLQEIPV+CPIS I+K R VQG++C+EV+WK   
Sbjct: 332  LPKIAERDLRRFANIRSRTSELGFNIPLQEIPVSCPISGIVKHRKVQGNECYEVSWKNI- 390

Query: 392  GLKSSVVPADLIECACPEKIVEFEEXXXXXXXXXXXXXXXXXXXAAXXXXXXXXXXXXXX 571
            GL  SVV ADL++ ACPE I+EFEE                   A               
Sbjct: 391  GLNLSVVSADLLQRACPEMIIEFEEKRADGKKQNKGKTKTKKSAAVMAEIDKRLKTLLLE 450

Query: 572  XXSENNAV--------SGSTPCRGAHTEL---------PI--------GKALPEVIDILS 676
              SE+  V           T   G H EL         PI             EVID+LS
Sbjct: 451  IESESRVVHNISHVPIDSKTSGTGVH-ELNQEVFLNIEPIIVDHARSCSTKRIEVIDLLS 509

Query: 677  PSPC----KTWKLQKTIDPLVDVIYVSESETDTSPEY 775
            PSP        K Q+     +DVI +S++E D SPE+
Sbjct: 510  PSPAIQTRNVSKFQQKTSQKIDVIDLSDTEIDQSPEH 546


>ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max]
          Length = 588

 Score =  199 bits (505), Expect = 7e-49
 Identities = 91/148 (61%), Positives = 119/148 (80%)
 Frame = +2

Query: 23  EKDMQKDHQFIKVIDAYLKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSEKTD 202
           + D++ D   ++VI+AY+KPKCH  DS++VH+ L  +PF+R++LQ++C  FF WPSEKTD
Sbjct: 279 KNDLRPDDNILQVINAYMKPKCHQADSDIVHKALAQYPFQRTKLQQICVGFFEWPSEKTD 338

Query: 203 EYILPKISERDLRRFAILRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEVAWK 382
            YILP I+ER+LRRFA LR TSSE G+ LPL EIPV CP+S IIK R VQG +C+EV+W+
Sbjct: 339 GYILPNIAERNLRRFANLRLTSSEVGLNLPLHEIPVKCPVSEIIKSRRVQGRECYEVSWE 398

Query: 383 EYDGLKSSVVPADLIECACPEKIVEFEE 466
             DGL++S+VPADLIE AC EKI+EFEE
Sbjct: 399 GMDGLETSIVPADLIESACREKILEFEE 426


>ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|355494502|gb|AES75705.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 571

 Score =  194 bits (492), Expect = 2e-47
 Identities = 91/143 (63%), Positives = 113/143 (79%)
 Frame = +2

Query: 38  KDHQFIKVIDAYLKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSEKTDEYILP 217
           +D   ++VIDAYLKPKCHS DSE + + L  +PF+R++L  +C+  F WPSE+TD YILP
Sbjct: 264 RDDTILQVIDAYLKPKCHSADSEFLLKALATYPFQRTKLHHICAVSFEWPSERTDGYILP 323

Query: 218 KISERDLRRFAILRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEVAWKEYDGL 397
            I+ERDLRRFA LR TSSE G+ LPL EIPV CP+S IIK R  QG +C+EV+WK+ DGL
Sbjct: 324 CIAERDLRRFANLRLTSSELGLNLPLHEIPVKCPVSEIIKSRKAQGRECYEVSWKDMDGL 383

Query: 398 KSSVVPADLIECACPEKIVEFEE 466
           ++S+VPADLIE ACPEKI EFEE
Sbjct: 384 ETSIVPADLIESACPEKISEFEE 406