BLASTX nr result

ID: Coptis24_contig00005491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005491
         (1770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321996.1| predicted protein [Populus trichocarpa] gi|2...   688   0.0  
ref|NP_197818.1| soluble starch synthase [Arabidopsis thaliana] ...   683   0.0  
ref|XP_002872103.1| hypothetical protein ARALYDRAFT_489289 [Arab...   682   0.0  
gb|AAF24126.1|AF121673_1 soluble starch synthase [Arabidopsis th...   681   0.0  
gb|ABV25893.1| starch synthase isoform I [Manihot esculenta]          676   0.0  

>ref|XP_002321996.1| predicted protein [Populus trichocarpa] gi|222868992|gb|EEF06123.1|
            predicted protein [Populus trichocarpa]
          Length = 649

 Score =  688 bits (1776), Expect = 0.0
 Identities = 319/393 (81%), Positives = 355/393 (90%)
 Frame = -2

Query: 1181 SIVFATSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCAAAIDLN 1002
            +IVF TSEAAPYSKTGGLGDVCGSLPI LAARGHRVMVVSPRY++G P DKN A A +L+
Sbjct: 140  NIVFVTSEAAPYSKTGGLGDVCGSLPIVLAARGHRVMVVSPRYLHGSPADKNFAGASELD 199

Query: 1001 CRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRFTLLCH 822
            C IK+ CFGG  EV+FFHEYR GVDWVFVDHPSYHRPGNPYGD  GA+GDNQFRF LLCH
Sbjct: 200  CHIKVYCFGGEQEVAFFHEYREGVDWVFVDHPSYHRPGNPYGDSRGAFGDNQFRFALLCH 259

Query: 821  AACEAPLVLPLGGFTYGEKCVFLANDWHAGLVPVLLAAKYRPYGVYKDARSILVIHNLAH 642
            AACEAPLVLPLGG+TYGEKC+FL NDWHAGLVPVLLA+KYRPYGVYKDAR+ILVIHNLAH
Sbjct: 260  AACEAPLVLPLGGYTYGEKCLFLVNDWHAGLVPVLLASKYRPYGVYKDARTILVIHNLAH 319

Query: 641  QGVEAGITYKNLGLPLEWYGALGWVFPTWARLHALDTGEAVNILKGAVVTADRILTVSEG 462
            QGVE   TY NLGLP EWYGALGWVFPTWAR HALDTGEAVN+LKGA+VT DRILTVS+G
Sbjct: 320  QGVEPAATYTNLGLPSEWYGALGWVFPTWARTHALDTGEAVNLLKGAIVTVDRILTVSKG 379

Query: 461  YSWEITTPEGGYGLNELLFSRKSVLNGITNGIDVEEWDPSSDELIDFHYSIDDLSGKVKC 282
            Y+WEITT EGGYGL+ELL SR+SVLNGITNGID+ EW+PSSD+ I  +YS+DDLSGKV+C
Sbjct: 380  YAWEITTVEGGYGLHELLSSRRSVLNGITNGIDIYEWNPSSDKHIASNYSVDDLSGKVQC 439

Query: 281  KTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQFVMLGSGDPQTEN 102
            K ALQKELGLP++PDCP+IGF+GRLDYQKG DLI+ A P+L+ DDVQFVMLGSGDP  E+
Sbjct: 440  KIALQKELGLPIKPDCPLIGFIGRLDYQKGIDLIRWATPELLEDDVQFVMLGSGDPLYED 499

Query: 101  WMRATESAYREKFRGWVGFDVPISHKITAGCDI 3
            WMRATES Y++KFRGWVGF++PISHKITAG DI
Sbjct: 500  WMRATESTYKDKFRGWVGFNIPISHKITAGADI 532


>ref|NP_197818.1| soluble starch synthase [Arabidopsis thaliana]
            gi|334187896|ref|NP_001190378.1| soluble starch synthase
            [Arabidopsis thaliana] gi|29337131|sp|Q9FNF2.1|SSY1_ARATH
            RecName: Full=Starch synthase 1,
            chloroplastic/amyloplastic; Short=AtSS1; Short=SSS;
            AltName: Full=Soluble starch synthase I; Flags: Precursor
            gi|10177090|dbj|BAB10396.1| soluble starch synthase
            [Arabidopsis thaliana] gi|22135791|gb|AAM91082.1|
            AT5g24300/MOP9_12 [Arabidopsis thaliana]
            gi|110742056|dbj|BAE98960.1| soluble starch synthase
            [Arabidopsis thaliana] gi|332005899|gb|AED93282.1|
            soluble starch synthase [Arabidopsis thaliana]
            gi|332005900|gb|AED93283.1| soluble starch synthase
            [Arabidopsis thaliana]
          Length = 652

 Score =  683 bits (1763), Expect = 0.0
 Identities = 315/393 (80%), Positives = 352/393 (89%)
 Frame = -2

Query: 1181 SIVFATSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCAAAIDLN 1002
            ++VF TSEAAPYSKTGGLGDVCGSLPIALA RGHRVMV+SPRY+NG   DKN A A DL 
Sbjct: 143  NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLG 202

Query: 1001 CRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRFTLLCH 822
             R+ + CFGG  EVSF+HEYR GVDWVFVDH SYHRPGNPYGD  GA+GDNQFRFTLLCH
Sbjct: 203  IRVTVNCFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTLLCH 262

Query: 821  AACEAPLVLPLGGFTYGEKCVFLANDWHAGLVPVLLAAKYRPYGVYKDARSILVIHNLAH 642
            AACEAPLVLPLGGFTYGEK +FL NDWHAGLVP+LLAAKYRPYGVYKDARSIL+IHNLAH
Sbjct: 263  AACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAH 322

Query: 641  QGVEAGITYKNLGLPLEWYGALGWVFPTWARLHALDTGEAVNILKGAVVTADRILTVSEG 462
            QGVE   TY NLGLP EWYGA+GWVFPTWAR HALDTGEAVN+LKGA+VT+DRI+TVS+G
Sbjct: 323  QGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQG 382

Query: 461  YSWEITTPEGGYGLNELLFSRKSVLNGITNGIDVEEWDPSSDELIDFHYSIDDLSGKVKC 282
            Y+WEITT EGGYGL +LL SRKSV+NGITNGI+V+EW+PS+DE I FHYS DD+S K+KC
Sbjct: 383  YAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDVSEKIKC 442

Query: 281  KTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQFVMLGSGDPQTEN 102
            K ALQKELGLP+RP+CPMIGF+GRLDYQKG DLIQ+A PDLM DD+QFVMLGSGDP+ E+
Sbjct: 443  KMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYES 502

Query: 101  WMRATESAYREKFRGWVGFDVPISHKITAGCDI 3
            WMR+ E  YR+KFRGWVGF+VPISH+ITAGCDI
Sbjct: 503  WMRSMEETYRDKFRGWVGFNVPISHRITAGCDI 535


>ref|XP_002872103.1| hypothetical protein ARALYDRAFT_489289 [Arabidopsis lyrata subsp.
            lyrata] gi|297317940|gb|EFH48362.1| hypothetical protein
            ARALYDRAFT_489289 [Arabidopsis lyrata subsp. lyrata]
          Length = 655

 Score =  682 bits (1760), Expect = 0.0
 Identities = 317/393 (80%), Positives = 350/393 (89%)
 Frame = -2

Query: 1181 SIVFATSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCAAAIDLN 1002
            ++VF TSEAAPYSKTGGLGDVCGSLPIALA RGHRVMVVSPRY+NG   D N A A DL 
Sbjct: 146  NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVVSPRYLNGTAADNNYARAKDLG 205

Query: 1001 CRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRFTLLCH 822
             RI + CFGG  EVSF+HEYR GVDWVFVDH SYHRPGNPYGD  GA+GDNQFRFTLLCH
Sbjct: 206  IRITVNCFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTLLCH 265

Query: 821  AACEAPLVLPLGGFTYGEKCVFLANDWHAGLVPVLLAAKYRPYGVYKDARSILVIHNLAH 642
            AACEAPLVLPLGGFTYGEK +FL NDWHAGLVP+LLAAKYRPYGVYKDARSIL+IHNLAH
Sbjct: 266  AACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAH 325

Query: 641  QGVEAGITYKNLGLPLEWYGALGWVFPTWARLHALDTGEAVNILKGAVVTADRILTVSEG 462
            QGVE   TY NLGLP EWYGA+GWVFPTWAR HALDTGEAVN+LKGA+VT+DRI+TVS+G
Sbjct: 326  QGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQG 385

Query: 461  YSWEITTPEGGYGLNELLFSRKSVLNGITNGIDVEEWDPSSDELIDFHYSIDDLSGKVKC 282
            Y+WEITT EGGYGL +LL SRKSV+NGITNGI+V+EW+PS+DE I FHYS DD S KVKC
Sbjct: 386  YAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDFSEKVKC 445

Query: 281  KTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQFVMLGSGDPQTEN 102
            K ALQKELGLP+RP+CPMIGF+GRLDYQKG DLIQ+A PDLM DD+QFVMLGSGDP+ E+
Sbjct: 446  KMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYES 505

Query: 101  WMRATESAYREKFRGWVGFDVPISHKITAGCDI 3
            WMR+ E  YR+KFRGWVGF+VPISH+ITAGCDI
Sbjct: 506  WMRSMEETYRDKFRGWVGFNVPISHRITAGCDI 538


>gb|AAF24126.1|AF121673_1 soluble starch synthase [Arabidopsis thaliana]
          Length = 575

 Score =  681 bits (1758), Expect = 0.0
 Identities = 314/393 (79%), Positives = 352/393 (89%)
 Frame = -2

Query: 1181 SIVFATSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCAAAIDLN 1002
            ++VF TSEAAPYSKTGGLGDVCGSLPIALA RGHRVMV+SPRY+NG   DKN A A DL 
Sbjct: 66   NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLG 125

Query: 1001 CRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRFTLLCH 822
             R+ + CFGG  EVSF+HE+R GVDWVFVDH SYHRPGNPYGD  GA+GDNQFRFTLLCH
Sbjct: 126  IRVTVNCFGGSQEVSFYHEHRDGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTLLCH 185

Query: 821  AACEAPLVLPLGGFTYGEKCVFLANDWHAGLVPVLLAAKYRPYGVYKDARSILVIHNLAH 642
            AACEAPLVLPLGGFTYGEK +FL NDWHAGLVP+LLAAKYRPYGVYKDARSIL+IHNLAH
Sbjct: 186  AACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAH 245

Query: 641  QGVEAGITYKNLGLPLEWYGALGWVFPTWARLHALDTGEAVNILKGAVVTADRILTVSEG 462
            QGVE   TY NLGLP EWYGA+GWVFPTWAR HALDTGEAVN+LKGA+VT+DRI+TVS+G
Sbjct: 246  QGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQG 305

Query: 461  YSWEITTPEGGYGLNELLFSRKSVLNGITNGIDVEEWDPSSDELIDFHYSIDDLSGKVKC 282
            Y+WEITT EGGYGL +LL SRKSV+NGITNGI+V+EW+PS+DE I FHYS DD+S K+KC
Sbjct: 306  YAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDVSEKIKC 365

Query: 281  KTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQFVMLGSGDPQTEN 102
            K ALQKELGLP+RP+CPMIGF+GRLDYQKG DLIQ+A PDLM DD+QFVMLGSGDP+ E+
Sbjct: 366  KMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYES 425

Query: 101  WMRATESAYREKFRGWVGFDVPISHKITAGCDI 3
            WMR+ E  YR+KFRGWVGF+VPISH+ITAGCDI
Sbjct: 426  WMRSMEETYRDKFRGWVGFNVPISHRITAGCDI 458


>gb|ABV25893.1| starch synthase isoform I [Manihot esculenta]
          Length = 633

 Score =  676 bits (1743), Expect = 0.0
 Identities = 316/393 (80%), Positives = 351/393 (89%)
 Frame = -2

Query: 1181 SIVFATSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCAAAIDLN 1002
            +IVF  +EAAPYSKTGGLGDVCGSLPI LAARGHRVMVVSPRY++    DK  A A+DL+
Sbjct: 124  NIVFVAAEAAPYSKTGGLGDVCGSLPIVLAARGHRVMVVSPRYLHFIHQDKVFANALDLD 183

Query: 1001 CRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRFTLLCH 822
              IK+ CFGG  +VSFFHEYR GVDWVFVDHPSYHRPGNPYGD  GA+GDNQFRFTLLCH
Sbjct: 184  RHIKVHCFGGAQDVSFFHEYREGVDWVFVDHPSYHRPGNPYGDSRGAFGDNQFRFTLLCH 243

Query: 821  AACEAPLVLPLGGFTYGEKCVFLANDWHAGLVPVLLAAKYRPYGVYKDARSILVIHNLAH 642
            AACEAPLVLPLGG+TYGEKC+FLANDWHAGLVPVLLAAKYRP+GVYKDAR +LVIHNLAH
Sbjct: 244  AACEAPLVLPLGGYTYGEKCLFLANDWHAGLVPVLLAAKYRPHGVYKDARCLLVIHNLAH 303

Query: 641  QGVEAGITYKNLGLPLEWYGALGWVFPTWARLHALDTGEAVNILKGAVVTADRILTVSEG 462
            QGVE  +TYKN GLP EWYGAL WVFP WAR HALD GEAVN+LKGA+VTADRILTVS+G
Sbjct: 304  QGVEPAVTYKNFGLPSEWYGALEWVFPNWARAHALDKGEAVNVLKGAIVTADRILTVSKG 363

Query: 461  YSWEITTPEGGYGLNELLFSRKSVLNGITNGIDVEEWDPSSDELIDFHYSIDDLSGKVKC 282
            Y+WE+TT EGGYGL+ELL SR+SVL+GITNGIDV EWDPS+DE I  HYS+DDLSGKV+C
Sbjct: 364  YAWEVTTVEGGYGLHELLSSRRSVLDGITNGIDVSEWDPSADEHIAAHYSVDDLSGKVQC 423

Query: 281  KTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQFVMLGSGDPQTEN 102
            K ALQKELGLP+RP CP+IGF+GRLDYQKG DLI+ A+P+LM DDVQFVMLGSGDP  E 
Sbjct: 424  KIALQKELGLPIRPMCPLIGFIGRLDYQKGIDLIRWAIPELMEDDVQFVMLGSGDPLYEE 483

Query: 101  WMRATESAYREKFRGWVGFDVPISHKITAGCDI 3
            WMR TES+YR+KFRGWVGF+VPISH+ITAGCDI
Sbjct: 484  WMRVTESSYRDKFRGWVGFNVPISHRITAGCDI 516


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