BLASTX nr result
ID: Coptis24_contig00005491
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005491
(1770 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321996.1| predicted protein [Populus trichocarpa] gi|2... 688 0.0
ref|NP_197818.1| soluble starch synthase [Arabidopsis thaliana] ... 683 0.0
ref|XP_002872103.1| hypothetical protein ARALYDRAFT_489289 [Arab... 682 0.0
gb|AAF24126.1|AF121673_1 soluble starch synthase [Arabidopsis th... 681 0.0
gb|ABV25893.1| starch synthase isoform I [Manihot esculenta] 676 0.0
>ref|XP_002321996.1| predicted protein [Populus trichocarpa] gi|222868992|gb|EEF06123.1|
predicted protein [Populus trichocarpa]
Length = 649
Score = 688 bits (1776), Expect = 0.0
Identities = 319/393 (81%), Positives = 355/393 (90%)
Frame = -2
Query: 1181 SIVFATSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCAAAIDLN 1002
+IVF TSEAAPYSKTGGLGDVCGSLPI LAARGHRVMVVSPRY++G P DKN A A +L+
Sbjct: 140 NIVFVTSEAAPYSKTGGLGDVCGSLPIVLAARGHRVMVVSPRYLHGSPADKNFAGASELD 199
Query: 1001 CRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRFTLLCH 822
C IK+ CFGG EV+FFHEYR GVDWVFVDHPSYHRPGNPYGD GA+GDNQFRF LLCH
Sbjct: 200 CHIKVYCFGGEQEVAFFHEYREGVDWVFVDHPSYHRPGNPYGDSRGAFGDNQFRFALLCH 259
Query: 821 AACEAPLVLPLGGFTYGEKCVFLANDWHAGLVPVLLAAKYRPYGVYKDARSILVIHNLAH 642
AACEAPLVLPLGG+TYGEKC+FL NDWHAGLVPVLLA+KYRPYGVYKDAR+ILVIHNLAH
Sbjct: 260 AACEAPLVLPLGGYTYGEKCLFLVNDWHAGLVPVLLASKYRPYGVYKDARTILVIHNLAH 319
Query: 641 QGVEAGITYKNLGLPLEWYGALGWVFPTWARLHALDTGEAVNILKGAVVTADRILTVSEG 462
QGVE TY NLGLP EWYGALGWVFPTWAR HALDTGEAVN+LKGA+VT DRILTVS+G
Sbjct: 320 QGVEPAATYTNLGLPSEWYGALGWVFPTWARTHALDTGEAVNLLKGAIVTVDRILTVSKG 379
Query: 461 YSWEITTPEGGYGLNELLFSRKSVLNGITNGIDVEEWDPSSDELIDFHYSIDDLSGKVKC 282
Y+WEITT EGGYGL+ELL SR+SVLNGITNGID+ EW+PSSD+ I +YS+DDLSGKV+C
Sbjct: 380 YAWEITTVEGGYGLHELLSSRRSVLNGITNGIDIYEWNPSSDKHIASNYSVDDLSGKVQC 439
Query: 281 KTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQFVMLGSGDPQTEN 102
K ALQKELGLP++PDCP+IGF+GRLDYQKG DLI+ A P+L+ DDVQFVMLGSGDP E+
Sbjct: 440 KIALQKELGLPIKPDCPLIGFIGRLDYQKGIDLIRWATPELLEDDVQFVMLGSGDPLYED 499
Query: 101 WMRATESAYREKFRGWVGFDVPISHKITAGCDI 3
WMRATES Y++KFRGWVGF++PISHKITAG DI
Sbjct: 500 WMRATESTYKDKFRGWVGFNIPISHKITAGADI 532
>ref|NP_197818.1| soluble starch synthase [Arabidopsis thaliana]
gi|334187896|ref|NP_001190378.1| soluble starch synthase
[Arabidopsis thaliana] gi|29337131|sp|Q9FNF2.1|SSY1_ARATH
RecName: Full=Starch synthase 1,
chloroplastic/amyloplastic; Short=AtSS1; Short=SSS;
AltName: Full=Soluble starch synthase I; Flags: Precursor
gi|10177090|dbj|BAB10396.1| soluble starch synthase
[Arabidopsis thaliana] gi|22135791|gb|AAM91082.1|
AT5g24300/MOP9_12 [Arabidopsis thaliana]
gi|110742056|dbj|BAE98960.1| soluble starch synthase
[Arabidopsis thaliana] gi|332005899|gb|AED93282.1|
soluble starch synthase [Arabidopsis thaliana]
gi|332005900|gb|AED93283.1| soluble starch synthase
[Arabidopsis thaliana]
Length = 652
Score = 683 bits (1763), Expect = 0.0
Identities = 315/393 (80%), Positives = 352/393 (89%)
Frame = -2
Query: 1181 SIVFATSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCAAAIDLN 1002
++VF TSEAAPYSKTGGLGDVCGSLPIALA RGHRVMV+SPRY+NG DKN A A DL
Sbjct: 143 NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLG 202
Query: 1001 CRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRFTLLCH 822
R+ + CFGG EVSF+HEYR GVDWVFVDH SYHRPGNPYGD GA+GDNQFRFTLLCH
Sbjct: 203 IRVTVNCFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTLLCH 262
Query: 821 AACEAPLVLPLGGFTYGEKCVFLANDWHAGLVPVLLAAKYRPYGVYKDARSILVIHNLAH 642
AACEAPLVLPLGGFTYGEK +FL NDWHAGLVP+LLAAKYRPYGVYKDARSIL+IHNLAH
Sbjct: 263 AACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAH 322
Query: 641 QGVEAGITYKNLGLPLEWYGALGWVFPTWARLHALDTGEAVNILKGAVVTADRILTVSEG 462
QGVE TY NLGLP EWYGA+GWVFPTWAR HALDTGEAVN+LKGA+VT+DRI+TVS+G
Sbjct: 323 QGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQG 382
Query: 461 YSWEITTPEGGYGLNELLFSRKSVLNGITNGIDVEEWDPSSDELIDFHYSIDDLSGKVKC 282
Y+WEITT EGGYGL +LL SRKSV+NGITNGI+V+EW+PS+DE I FHYS DD+S K+KC
Sbjct: 383 YAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDVSEKIKC 442
Query: 281 KTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQFVMLGSGDPQTEN 102
K ALQKELGLP+RP+CPMIGF+GRLDYQKG DLIQ+A PDLM DD+QFVMLGSGDP+ E+
Sbjct: 443 KMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYES 502
Query: 101 WMRATESAYREKFRGWVGFDVPISHKITAGCDI 3
WMR+ E YR+KFRGWVGF+VPISH+ITAGCDI
Sbjct: 503 WMRSMEETYRDKFRGWVGFNVPISHRITAGCDI 535
>ref|XP_002872103.1| hypothetical protein ARALYDRAFT_489289 [Arabidopsis lyrata subsp.
lyrata] gi|297317940|gb|EFH48362.1| hypothetical protein
ARALYDRAFT_489289 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 682 bits (1760), Expect = 0.0
Identities = 317/393 (80%), Positives = 350/393 (89%)
Frame = -2
Query: 1181 SIVFATSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCAAAIDLN 1002
++VF TSEAAPYSKTGGLGDVCGSLPIALA RGHRVMVVSPRY+NG D N A A DL
Sbjct: 146 NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVVSPRYLNGTAADNNYARAKDLG 205
Query: 1001 CRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRFTLLCH 822
RI + CFGG EVSF+HEYR GVDWVFVDH SYHRPGNPYGD GA+GDNQFRFTLLCH
Sbjct: 206 IRITVNCFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTLLCH 265
Query: 821 AACEAPLVLPLGGFTYGEKCVFLANDWHAGLVPVLLAAKYRPYGVYKDARSILVIHNLAH 642
AACEAPLVLPLGGFTYGEK +FL NDWHAGLVP+LLAAKYRPYGVYKDARSIL+IHNLAH
Sbjct: 266 AACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAH 325
Query: 641 QGVEAGITYKNLGLPLEWYGALGWVFPTWARLHALDTGEAVNILKGAVVTADRILTVSEG 462
QGVE TY NLGLP EWYGA+GWVFPTWAR HALDTGEAVN+LKGA+VT+DRI+TVS+G
Sbjct: 326 QGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQG 385
Query: 461 YSWEITTPEGGYGLNELLFSRKSVLNGITNGIDVEEWDPSSDELIDFHYSIDDLSGKVKC 282
Y+WEITT EGGYGL +LL SRKSV+NGITNGI+V+EW+PS+DE I FHYS DD S KVKC
Sbjct: 386 YAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDFSEKVKC 445
Query: 281 KTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQFVMLGSGDPQTEN 102
K ALQKELGLP+RP+CPMIGF+GRLDYQKG DLIQ+A PDLM DD+QFVMLGSGDP+ E+
Sbjct: 446 KMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYES 505
Query: 101 WMRATESAYREKFRGWVGFDVPISHKITAGCDI 3
WMR+ E YR+KFRGWVGF+VPISH+ITAGCDI
Sbjct: 506 WMRSMEETYRDKFRGWVGFNVPISHRITAGCDI 538
>gb|AAF24126.1|AF121673_1 soluble starch synthase [Arabidopsis thaliana]
Length = 575
Score = 681 bits (1758), Expect = 0.0
Identities = 314/393 (79%), Positives = 352/393 (89%)
Frame = -2
Query: 1181 SIVFATSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCAAAIDLN 1002
++VF TSEAAPYSKTGGLGDVCGSLPIALA RGHRVMV+SPRY+NG DKN A A DL
Sbjct: 66 NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLG 125
Query: 1001 CRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRFTLLCH 822
R+ + CFGG EVSF+HE+R GVDWVFVDH SYHRPGNPYGD GA+GDNQFRFTLLCH
Sbjct: 126 IRVTVNCFGGSQEVSFYHEHRDGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTLLCH 185
Query: 821 AACEAPLVLPLGGFTYGEKCVFLANDWHAGLVPVLLAAKYRPYGVYKDARSILVIHNLAH 642
AACEAPLVLPLGGFTYGEK +FL NDWHAGLVP+LLAAKYRPYGVYKDARSIL+IHNLAH
Sbjct: 186 AACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAH 245
Query: 641 QGVEAGITYKNLGLPLEWYGALGWVFPTWARLHALDTGEAVNILKGAVVTADRILTVSEG 462
QGVE TY NLGLP EWYGA+GWVFPTWAR HALDTGEAVN+LKGA+VT+DRI+TVS+G
Sbjct: 246 QGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQG 305
Query: 461 YSWEITTPEGGYGLNELLFSRKSVLNGITNGIDVEEWDPSSDELIDFHYSIDDLSGKVKC 282
Y+WEITT EGGYGL +LL SRKSV+NGITNGI+V+EW+PS+DE I FHYS DD+S K+KC
Sbjct: 306 YAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDVSEKIKC 365
Query: 281 KTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQFVMLGSGDPQTEN 102
K ALQKELGLP+RP+CPMIGF+GRLDYQKG DLIQ+A PDLM DD+QFVMLGSGDP+ E+
Sbjct: 366 KMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYES 425
Query: 101 WMRATESAYREKFRGWVGFDVPISHKITAGCDI 3
WMR+ E YR+KFRGWVGF+VPISH+ITAGCDI
Sbjct: 426 WMRSMEETYRDKFRGWVGFNVPISHRITAGCDI 458
>gb|ABV25893.1| starch synthase isoform I [Manihot esculenta]
Length = 633
Score = 676 bits (1743), Expect = 0.0
Identities = 316/393 (80%), Positives = 351/393 (89%)
Frame = -2
Query: 1181 SIVFATSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCAAAIDLN 1002
+IVF +EAAPYSKTGGLGDVCGSLPI LAARGHRVMVVSPRY++ DK A A+DL+
Sbjct: 124 NIVFVAAEAAPYSKTGGLGDVCGSLPIVLAARGHRVMVVSPRYLHFIHQDKVFANALDLD 183
Query: 1001 CRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRFTLLCH 822
IK+ CFGG +VSFFHEYR GVDWVFVDHPSYHRPGNPYGD GA+GDNQFRFTLLCH
Sbjct: 184 RHIKVHCFGGAQDVSFFHEYREGVDWVFVDHPSYHRPGNPYGDSRGAFGDNQFRFTLLCH 243
Query: 821 AACEAPLVLPLGGFTYGEKCVFLANDWHAGLVPVLLAAKYRPYGVYKDARSILVIHNLAH 642
AACEAPLVLPLGG+TYGEKC+FLANDWHAGLVPVLLAAKYRP+GVYKDAR +LVIHNLAH
Sbjct: 244 AACEAPLVLPLGGYTYGEKCLFLANDWHAGLVPVLLAAKYRPHGVYKDARCLLVIHNLAH 303
Query: 641 QGVEAGITYKNLGLPLEWYGALGWVFPTWARLHALDTGEAVNILKGAVVTADRILTVSEG 462
QGVE +TYKN GLP EWYGAL WVFP WAR HALD GEAVN+LKGA+VTADRILTVS+G
Sbjct: 304 QGVEPAVTYKNFGLPSEWYGALEWVFPNWARAHALDKGEAVNVLKGAIVTADRILTVSKG 363
Query: 461 YSWEITTPEGGYGLNELLFSRKSVLNGITNGIDVEEWDPSSDELIDFHYSIDDLSGKVKC 282
Y+WE+TT EGGYGL+ELL SR+SVL+GITNGIDV EWDPS+DE I HYS+DDLSGKV+C
Sbjct: 364 YAWEVTTVEGGYGLHELLSSRRSVLDGITNGIDVSEWDPSADEHIAAHYSVDDLSGKVQC 423
Query: 281 KTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAMPDLMRDDVQFVMLGSGDPQTEN 102
K ALQKELGLP+RP CP+IGF+GRLDYQKG DLI+ A+P+LM DDVQFVMLGSGDP E
Sbjct: 424 KIALQKELGLPIRPMCPLIGFIGRLDYQKGIDLIRWAIPELMEDDVQFVMLGSGDPLYEE 483
Query: 101 WMRATESAYREKFRGWVGFDVPISHKITAGCDI 3
WMR TES+YR+KFRGWVGF+VPISH+ITAGCDI
Sbjct: 484 WMRVTESSYRDKFRGWVGFNVPISHRITAGCDI 516