BLASTX nr result

ID: Coptis24_contig00005480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005480
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270593.1| PREDICTED: tubulin-specific chaperone A [Vit...   169   2e-40
gb|ABK27074.1| unknown [Picea sitchensis]                             162   2e-38
gb|ABK26905.1| unknown [Picea sitchensis]                             162   2e-38
ref|NP_001238615.1| uncharacterized protein LOC100500215 [Glycin...   162   3e-38
ref|XP_002523979.1| tubulin-specific chaperone A (tubulin-foldin...   162   3e-38

>ref|XP_002270593.1| PREDICTED: tubulin-specific chaperone A [Vitis vinifera]
           gi|147854591|emb|CAN82778.1| hypothetical protein
           VITISV_011414 [Vitis vinifera]
           gi|297734639|emb|CBI16690.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score =  169 bits (429), Expect = 2e-40
 Identities = 87/109 (79%), Positives = 97/109 (88%), Gaps = 1/109 (0%)
 Frame = +3

Query: 36  IRNLKIKIGTCKRITKELHSYEREVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIP 215
           IRNLKIK  TCKRI KE HSYE+EVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIP
Sbjct: 4   IRNLKIKTSTCKRIIKEFHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIP 63

Query: 216 DCRKRLEASLADIKESLAEL-ESNQQDGEEIEEARSVISEMEALCQTSE 359
           DCRKRLEASLAD+K +LAEL ESNQ++G EIE+ARS  +E++   QT+E
Sbjct: 64  DCRKRLEASLADLKGTLAELEESNQKEGPEIEDARSTTAEVDNFFQTTE 112


>gb|ABK27074.1| unknown [Picea sitchensis]
          Length = 112

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/109 (70%), Positives = 96/109 (88%)
 Frame = +3

Query: 36  IRNLKIKIGTCKRITKELHSYEREVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIP 215
           ++ LKIK GTCKR+ KELHSYE+EV+REAAKTADMKEKGADPYDLKQQENVLAESRMM+P
Sbjct: 4   LKTLKIKTGTCKRVLKELHSYEKEVDREAAKTADMKEKGADPYDLKQQENVLAESRMMLP 63

Query: 216 DCRKRLEASLADIKESLAELESNQQDGEEIEEARSVISEMEALCQTSES 362
           DCRKRLE++L D++  LAELE + Q+G+EI EA++V+ ++EAL +T  S
Sbjct: 64  DCRKRLESALTDLQGMLAELEQSGQEGDEIREAKTVVKDIEALFETPTS 112


>gb|ABK26905.1| unknown [Picea sitchensis]
          Length = 112

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/109 (70%), Positives = 96/109 (88%)
 Frame = +3

Query: 36  IRNLKIKIGTCKRITKELHSYEREVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIP 215
           ++ LKIK GTCKR+ KELHSYE+EV+REAAKTADMKEKGADPYDLKQQENVLAESRMM+P
Sbjct: 4   LKTLKIKTGTCKRVLKELHSYEKEVDREAAKTADMKEKGADPYDLKQQENVLAESRMMLP 63

Query: 216 DCRKRLEASLADIKESLAELESNQQDGEEIEEARSVISEMEALCQTSES 362
           DCRKRLE++L D++  LAELE + Q+G+EI EA++V+ ++EAL +T  S
Sbjct: 64  DCRKRLESALTDLQGMLAELEQSGQEGDEIREAKTVVKDVEALFETPTS 112


>ref|NP_001238615.1| uncharacterized protein LOC100500215 [Glycine max]
           gi|255629728|gb|ACU15213.1| unknown [Glycine max]
          Length = 114

 Score =  162 bits (410), Expect = 3e-38
 Identities = 83/113 (73%), Positives = 98/113 (86%), Gaps = 1/113 (0%)
 Frame = +3

Query: 24  MGSLIRNLKIKIGTCKRITKELHSYEREVEREAAKTADMKEKGADPYDLKQQENVLAESR 203
           M + +R+LKIK  TCKRI KELHSYE+EVEREAAKTADMKEKGADPYDLKQQENVLAESR
Sbjct: 1   MATTVRSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESR 60

Query: 204 MMIPDCRKRLEASLADIKESLAEL-ESNQQDGEEIEEARSVISEMEALCQTSE 359
           MMIPDCRKRLEA+LAD+K  LAEL ES+++   EI+EAR+ I E+E + +T+E
Sbjct: 61  MMIPDCRKRLEAALADLKGLLAELEESDEKASPEIDEARNTIVEVEKVFETTE 113


>ref|XP_002523979.1| tubulin-specific chaperone A (tubulin-folding cofactor A) (cfa),
           putative [Ricinus communis] gi|223536706|gb|EEF38347.1|
           tubulin-specific chaperone A (tubulin-folding cofactor
           A) (cfa), putative [Ricinus communis]
          Length = 113

 Score =  162 bits (410), Expect = 3e-38
 Identities = 81/110 (73%), Positives = 96/110 (87%), Gaps = 1/110 (0%)
 Frame = +3

Query: 36  IRNLKIKIGTCKRITKELHSYEREVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIP 215
           IRN+KIK   CKRI KELHSYE+EVEREAAKT DMK+KGADPYDLKQQENVLAESRMMIP
Sbjct: 4   IRNVKIKTSACKRIVKELHSYEKEVEREAAKTTDMKDKGADPYDLKQQENVLAESRMMIP 63

Query: 216 DCRKRLEASLADIKESLAEL-ESNQQDGEEIEEARSVISEMEALCQTSES 362
           DCRKRLEA++AD+K +L EL ES+ +DG EIE+ARS I+E+E L Q +++
Sbjct: 64  DCRKRLEAAIADLKGTLVELEESDNKDGPEIEDARSTITEVEQLFQATDA 113


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