BLASTX nr result

ID: Coptis24_contig00005473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005473
         (1038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37575.3| unnamed protein product [Vitis vinifera]              161   3e-37
ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinif...   161   3e-37
ref|XP_002309890.1| predicted protein [Populus trichocarpa] gi|2...   160   4e-37
ref|XP_002517217.1| brushy protein, putative [Ricinus communis] ...   145   2e-32
ref|XP_004165445.1| PREDICTED: LOW QUALITY PROTEIN: protein TONS...   128   3e-27

>emb|CBI37575.3| unnamed protein product [Vitis vinifera]
          Length = 1342

 Score =  161 bits (407), Expect = 3e-37
 Identities = 95/208 (45%), Positives = 123/208 (59%)
 Frame = +2

Query: 59   LVANPHCYLRVLVLNKCCFGLAGVTKMIQSLAGNDSLEELHLAENVDMDKESISLSDATQ 238
            L+ NPHC L+VLVLN C  GLAGV ++IQ+L+ NDSLEEL++A N D+D+   S ++   
Sbjct: 1130 LLMNPHCCLKVLVLNNCQLGLAGVLQIIQALSENDSLEELNVAGNADLDRHCTSQNNLKA 1189

Query: 239  ELHSKCIQPNLNFCDTNPKHNLSKDVDDVQEDLCAVNSDGNNLEVADSEDGLVRGEPXXX 418
               S+     LN   ++PK  + K+V   QE  C +N+D N LEVADSED  +  EP   
Sbjct: 1190 LESSETFPQILNISVSSPKVCVLKEVAAAQEGSCIMNTDYNQLEVADSEDDPITAEP-AA 1248

Query: 419  XXXXXXXXXXXXXXXHPENKLIQELSTAIGMEK*LKLLDLSSNGFTRDIIETFYTAWSSS 598
                             E++ IQ LSTAIGM K L+LLDLS+NGF+    ET YTAWS  
Sbjct: 1249 SYDDSCTNSCKRMLQFSESEFIQGLSTAIGMAKKLQLLDLSNNGFSTQDTETIYTAWSLG 1308

Query: 599  WRYGGSTQRDVQEQVVHYSVDDKNCCGV 682
             R  G  QR ++EQ VH  V  + CCGV
Sbjct: 1309 SR-SGLAQRHIKEQTVHLLVRGQKCCGV 1335


>ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinifera]
          Length = 1309

 Score =  161 bits (407), Expect = 3e-37
 Identities = 95/208 (45%), Positives = 123/208 (59%)
 Frame = +2

Query: 59   LVANPHCYLRVLVLNKCCFGLAGVTKMIQSLAGNDSLEELHLAENVDMDKESISLSDATQ 238
            L+ NPHC L+VLVLN C  GLAGV ++IQ+L+ NDSLEEL++A N D+D+   S ++   
Sbjct: 1097 LLMNPHCCLKVLVLNNCQLGLAGVLQIIQALSENDSLEELNVAGNADLDRHCTSQNNLKA 1156

Query: 239  ELHSKCIQPNLNFCDTNPKHNLSKDVDDVQEDLCAVNSDGNNLEVADSEDGLVRGEPXXX 418
               S+     LN   ++PK  + K+V   QE  C +N+D N LEVADSED  +  EP   
Sbjct: 1157 LESSETFPQILNISVSSPKVCVLKEVAAAQEGSCIMNTDYNQLEVADSEDDPITAEP-AA 1215

Query: 419  XXXXXXXXXXXXXXXHPENKLIQELSTAIGMEK*LKLLDLSSNGFTRDIIETFYTAWSSS 598
                             E++ IQ LSTAIGM K L+LLDLS+NGF+    ET YTAWS  
Sbjct: 1216 SYDDSCTNSCKRMLQFSESEFIQGLSTAIGMAKKLQLLDLSNNGFSTQDTETIYTAWSLG 1275

Query: 599  WRYGGSTQRDVQEQVVHYSVDDKNCCGV 682
             R  G  QR ++EQ VH  V  + CCGV
Sbjct: 1276 SR-SGLAQRHIKEQTVHLLVRGQKCCGV 1302


>ref|XP_002309890.1| predicted protein [Populus trichocarpa] gi|222852793|gb|EEE90340.1|
            predicted protein [Populus trichocarpa]
          Length = 1353

 Score =  160 bits (406), Expect = 4e-37
 Identities = 88/216 (40%), Positives = 132/216 (61%), Gaps = 3/216 (1%)
 Frame = +2

Query: 38   LKQGVNGLVA---NPHCYLRVLVLNKCCFGLAGVTKMIQSLAGNDSLEELHLAENVDMDK 208
            +++G N +V+   NP C L+VLVLNKC  GL G+ +MIQ+LA ND LEELHLA+N +++K
Sbjct: 1132 MQEGTNAMVSLLTNPQCCLKVLVLNKCQLGLTGILQMIQALAENDCLEELHLADNANLEK 1191

Query: 209  ESISLSDATQELHSKCIQPNLNFCDTNPKHNLSKDVDDVQEDLCAVNSDGNNLEVADSED 388
              +   D+T+   S  +QPNLN  +++ K ++ K+ D  ++ +C +N++ N LEVADSED
Sbjct: 1192 TYMIQYDSTKGSCSDILQPNLNKSESS-KMSVPKESDSDKQGVCVMNTECNQLEVADSED 1250

Query: 389  GLVRGEPXXXXXXXXXXXXXXXXXXHPENKLIQELSTAIGMEK*LKLLDLSSNGFTRDII 568
            G +R E                     E + IQEL+TAI M K L+ ++L +NGFT  + 
Sbjct: 1251 GPIRAEAAPSDFDDSCTSSCQKNSL-LECQFIQELTTAISMAKQLQFMELGNNGFTTQVA 1309

Query: 569  ETFYTAWSSSWRYGGSTQRDVQEQVVHYSVDDKNCC 676
            E  YTAWSS     G   R +++Q +H+S++   CC
Sbjct: 1310 EALYTAWSSRLE-NGLAWRHIEDQTIHFSMETNKCC 1344


>ref|XP_002517217.1| brushy protein, putative [Ricinus communis]
            gi|223543588|gb|EEF45117.1| brushy protein, putative
            [Ricinus communis]
          Length = 1327

 Score =  145 bits (365), Expect = 2e-32
 Identities = 91/231 (39%), Positives = 129/231 (55%), Gaps = 18/231 (7%)
 Frame = +2

Query: 38   LKQGVNG---LVANPHCYLRVLVLNKCCFGLAGVTKMIQSLAGNDSLEELHLAENVDMDK 208
            +++GVN    L+ NP C L+VLVLNKC  GL GV ++I++L+ N  LEELH+A+N   D+
Sbjct: 1091 MQEGVNAITSLLVNPRCCLKVLVLNKCQLGLTGVLQVIKTLSENHHLEELHVADNSSQDE 1150

Query: 209  ESISLSDATQELHSKCIQPNLNFCDTNPKHNLSKDVD--------------DV-QEDLCA 343
            + +   D+T    +  +QPN +  +++ K    K  D              D+  E LCA
Sbjct: 1151 KHMMRYDSTTRCSADLLQPNFSTSESSLKVCGPKKADTENEALKVCAPEKADINHEALCA 1210

Query: 344  VNSDGNNLEVADSEDGLVRGEPXXXXXXXXXXXXXXXXXXHPENKLIQELSTAIGMEK*L 523
            VN+D N LEVADSED  +R E                     E + IQELS AI M K L
Sbjct: 1211 VNTDCNQLEVADSEDNEIRVEAGPEFDDSCTSSSQKNSSL--ECQFIQELSAAISMAKQL 1268

Query: 524  KLLDLSSNGFTRDIIETFYTAWSSSWRYGGSTQRDVQEQVVHYSVDDKNCC 676
            KLLDLS+NGF+  + ET   AWSS +    S  R +++Q++H+S+ D+ CC
Sbjct: 1269 KLLDLSNNGFSNPVAETLSNAWSSRFTTDVS-WRHIKDQIIHFSMSDEMCC 1318


>ref|XP_004165445.1| PREDICTED: LOW QUALITY PROTEIN: protein TONSOKU-like [Cucumis
            sativus]
          Length = 1342

 Score =  128 bits (321), Expect = 3e-27
 Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 4/213 (1%)
 Frame = +2

Query: 50   VNGLVANPHCYLRVLVLNKCCFGLAGVTKMIQSLAGNDSLEELHLAENVDMDKESISLSD 229
            V+ L+ANP C ++ L+LNKC  GL GV ++IQ++AGN  LEEL+LA+N+D+DK  +  + 
Sbjct: 1131 VSSLIANPLCGIKFLLLNKCQLGLTGVAQIIQAIAGNHCLEELNLADNIDLDKHPLQCNI 1190

Query: 230  ATQELHSKCIQPNLNFC-DTNPKHNL---SKDVDDVQEDLCAVNSDGNNLEVADSEDGLV 397
              +E + + +QP    C D +  H L   SK+ D  Q++L   N++ + LEVADSE+  +
Sbjct: 1191 IDKE-NKELVQP----CHDISKPHGLTCSSKEFDLAQQNLEETNTEYDQLEVADSEEP-I 1244

Query: 398  RGEPXXXXXXXXXXXXXXXXXXHPENKLIQELSTAIGMEK*LKLLDLSSNGFTRDIIETF 577
            R  P                    + + I  LSTAIGM K L+LLDLS+NGF+    ET 
Sbjct: 1245 REAPASGIDDSCASSCERKSTSF-DCQFILSLSTAIGMAKTLRLLDLSNNGFSSQETETI 1303

Query: 578  YTAWSSSWRYGGSTQRDVQEQVVHYSVDDKNCC 676
            + AWS+S       QR +++ +VH  V    CC
Sbjct: 1304 FGAWSTS--RTDLAQRHIKDNIVHLYVKGTKCC 1334


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