BLASTX nr result

ID: Coptis24_contig00005470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005470
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551927.1| PREDICTED: vacuolar protein sorting-associat...   120   1e-25
ref|XP_003532091.1| PREDICTED: vacuolar protein sorting-associat...   120   1e-25
ref|XP_002526647.1| vacuolar protein sorting vps16, putative [Ri...   120   1e-25
ref|XP_002283428.1| PREDICTED: vacuolar protein sorting-associat...   119   2e-25
gb|AFK37940.1| unknown [Lotus japonicus]                              119   3e-25

>ref|XP_003551927.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Glycine max]
          Length = 843

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/68 (88%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   FLSTGQLQDVAFLLWRESWELGKNPMASKGSPLHGPRIKLIEKARDLFFEAKE-TFETKA 177
           FLSTGQLQDVAFLLW+ESWELGKNPMASKGSPLHGPRIKLIEKA  LF E KE TFE+KA
Sbjct: 612 FLSTGQLQDVAFLLWKESWELGKNPMASKGSPLHGPRIKLIEKAHGLFAETKEHTFESKA 671

Query: 178 ADEHAKLL 201
           A+EHAKLL
Sbjct: 672 AEEHAKLL 679


>ref|XP_003532091.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Glycine max]
          Length = 843

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/68 (88%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   FLSTGQLQDVAFLLWRESWELGKNPMASKGSPLHGPRIKLIEKARDLFFEAKE-TFETKA 177
           FLSTGQLQDVAFLLW+ESWELGKNPMASKGSPLHGPRIKLIEKA  LF E KE TFE+KA
Sbjct: 612 FLSTGQLQDVAFLLWKESWELGKNPMASKGSPLHGPRIKLIEKAHGLFAETKEHTFESKA 671

Query: 178 ADEHAKLL 201
           A+EHAKLL
Sbjct: 672 AEEHAKLL 679


>ref|XP_002526647.1| vacuolar protein sorting vps16, putative [Ricinus communis]
           gi|223534014|gb|EEF35735.1| vacuolar protein sorting
           vps16, putative [Ricinus communis]
          Length = 851

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/68 (86%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   FLSTGQLQDVAFLLWRESWELGKNPMASKGSPLHGPRIKLIEKARDLFFEAKE-TFETKA 177
           FLSTGQLQDVAFLLW+ESWELGKNPMASKGSPLHGPRIKLIEKA++LF E KE  FE+KA
Sbjct: 620 FLSTGQLQDVAFLLWKESWELGKNPMASKGSPLHGPRIKLIEKAQNLFLETKEHAFESKA 679

Query: 178 ADEHAKLL 201
           A+EHAKLL
Sbjct: 680 AEEHAKLL 687


>ref|XP_002283428.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Vitis vinifera] gi|302143532|emb|CBI22093.3| unnamed
           protein product [Vitis vinifera]
          Length = 838

 Score =  119 bits (299), Expect = 2e-25
 Identities = 58/68 (85%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   FLSTGQLQDVAFLLWRESWELGKNPMASKGSPLHGPRIKLIEKARDLFFEAKE-TFETKA 177
           FLSTGQLQDVAFLLW+ESWELGKNPMASKGSPLHGPRIK+IEKA+ LF E KE TFE+KA
Sbjct: 609 FLSTGQLQDVAFLLWKESWELGKNPMASKGSPLHGPRIKIIEKAQSLFSETKEHTFESKA 668

Query: 178 ADEHAKLL 201
           A+EHAKL+
Sbjct: 669 AEEHAKLI 676


>gb|AFK37940.1| unknown [Lotus japonicus]
          Length = 375

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/68 (86%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   FLSTGQLQDVAFLLWRESWELGKNPMASKGSPLHGPRIKLIEKARDLFFEAKE-TFETKA 177
           FLSTGQLQDVAFLLW+ESW LGKNPMASKGSPLHGPRIKLIEKA++LF E KE TFE+KA
Sbjct: 143 FLSTGQLQDVAFLLWKESWALGKNPMASKGSPLHGPRIKLIEKAQNLFAETKEHTFESKA 202

Query: 178 ADEHAKLL 201
           A+EHAKLL
Sbjct: 203 AEEHAKLL 210


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