BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005468
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872894.1| pentatricopeptide repeat-containing protein ...    94   1e-25
emb|CAB80949.1| hypothetical protein [Arabidopsis thaliana]            94   1e-25
ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana] ...    94   1e-25
ref|NP_001154198.1| uncharacterized protein [Arabidopsis thalian...    94   1e-25
gb|AAB61014.1| A_IG002N01.1 gene product [Arabidopsis thaliana]        94   1e-25

>ref|XP_002872894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297318731|gb|EFH49153.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1162

 Score = 94.0 bits (232), Expect(2) = 1e-25
 Identities = 47/58 (81%), Positives = 51/58 (87%)
 Frame = +2

Query: 53   WRQMQLMTTNNYDSFVHFVIDFIVKGLEVIMMQKRFSQLGGLQLNRDVRALVSHFSSM 226
            W Q  LMT+NNYDSF+H +IDFIVK LEVIMMQKRFSQLGGLQL+RD RALVSHFS M
Sbjct: 1039 WLQ-PLMTSNNYDSFLHLIIDFIVKRLEVIMMQKRFSQLGGLQLDRDTRALVSHFSGM 1095



 Score = 47.8 bits (112), Expect(2) = 1e-25
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +1

Query: 1    YAENEVNNPWVQKLLHAVETNAA 69
            YAENEVN+PWVQ+LLH+VETNAA
Sbjct: 1016 YAENEVNDPWVQRLLHSVETNAA 1038


>emb|CAB80949.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1117

 Score = 94.0 bits (232), Expect(2) = 1e-25
 Identities = 47/58 (81%), Positives = 51/58 (87%)
 Frame = +2

Query: 53   WRQMQLMTTNNYDSFVHFVIDFIVKGLEVIMMQKRFSQLGGLQLNRDVRALVSHFSSM 226
            W Q  LMT+NNYDSF+H +IDFIVK LEVIMMQKRFSQLGGLQL+RD RALVSHFS M
Sbjct: 994  WLQ-PLMTSNNYDSFLHLIIDFIVKRLEVIMMQKRFSQLGGLQLDRDTRALVSHFSGM 1050



 Score = 47.8 bits (112), Expect(2) = 1e-25
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +1

Query: 1    YAENEVNNPWVQKLLHAVETNAA 69
            YAENEVN+PWVQ+LLH+VETNAA
Sbjct: 971  YAENEVNDPWVQRLLHSVETNAA 993


>ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana]
            gi|332656619|gb|AEE82019.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 1110

 Score = 94.0 bits (232), Expect(2) = 1e-25
 Identities = 47/58 (81%), Positives = 51/58 (87%)
 Frame = +2

Query: 53   WRQMQLMTTNNYDSFVHFVIDFIVKGLEVIMMQKRFSQLGGLQLNRDVRALVSHFSSM 226
            W Q  LMT+NNYDSF+H +IDFIVK LEVIMMQKRFSQLGGLQL+RD RALVSHFS M
Sbjct: 987  WLQ-PLMTSNNYDSFLHLIIDFIVKRLEVIMMQKRFSQLGGLQLDRDTRALVSHFSGM 1043



 Score = 47.8 bits (112), Expect(2) = 1e-25
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +1

Query: 1    YAENEVNNPWVQKLLHAVETNAA 69
            YAENEVN+PWVQ+LLH+VETNAA
Sbjct: 964  YAENEVNDPWVQRLLHSVETNAA 986


>ref|NP_001154198.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75154279|sp|Q8L838.1|COG4_ARATH RecName:
           Full=Conserved oligomeric Golgi complex subunit 4;
           Short=COG complex subunit 4; AltName: Full=Component of
           oligomeric Golgi complex 4 gi|21539537|gb|AAM53321.1|
           unknown protein [Arabidopsis thaliana]
           gi|34098793|gb|AAQ56779.1| At4g01400 [Arabidopsis
           thaliana] gi|332656620|gb|AEE82020.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 738

 Score = 94.0 bits (232), Expect(2) = 1e-25
 Identities = 47/58 (81%), Positives = 51/58 (87%)
 Frame = +2

Query: 53  WRQMQLMTTNNYDSFVHFVIDFIVKGLEVIMMQKRFSQLGGLQLNRDVRALVSHFSSM 226
           W Q  LMT+NNYDSF+H +IDFIVK LEVIMMQKRFSQLGGLQL+RD RALVSHFS M
Sbjct: 615 WLQ-PLMTSNNYDSFLHLIIDFIVKRLEVIMMQKRFSQLGGLQLDRDTRALVSHFSGM 671



 Score = 47.8 bits (112), Expect(2) = 1e-25
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +1

Query: 1   YAENEVNNPWVQKLLHAVETNAA 69
           YAENEVN+PWVQ+LLH+VETNAA
Sbjct: 592 YAENEVNDPWVQRLLHSVETNAA 614


>gb|AAB61014.1| A_IG002N01.1 gene product [Arabidopsis thaliana]
          Length = 177

 Score = 94.0 bits (232), Expect(2) = 1e-25
 Identities = 47/58 (81%), Positives = 51/58 (87%)
 Frame = +2

Query: 53  WRQMQLMTTNNYDSFVHFVIDFIVKGLEVIMMQKRFSQLGGLQLNRDVRALVSHFSSM 226
           W Q  LMT+NNYDSF+H +IDFIVK LEVIMMQKRFSQLGGLQL+RD RALVSHFS M
Sbjct: 54  WLQ-PLMTSNNYDSFLHLIIDFIVKRLEVIMMQKRFSQLGGLQLDRDTRALVSHFSGM 110



 Score = 47.8 bits (112), Expect(2) = 1e-25
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +1

Query: 1  YAENEVNNPWVQKLLHAVETNAA 69
          YAENEVN+PWVQ+LLH+VETNAA
Sbjct: 31 YAENEVNDPWVQRLLHSVETNAA 53