BLASTX nr result

ID: Coptis24_contig00005457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005457
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890022.1| XH/XS domain-containing protein [Arabidopsis...    86   1e-18
ref|XP_004139640.1| PREDICTED: uncharacterized protein LOC101205...    85   2e-18
ref|XP_002280898.2| PREDICTED: uncharacterized protein LOC100260...    85   7e-18
emb|CBI16121.3| unnamed protein product [Vitis vinifera]               85   7e-18
ref|NP_172834.1| XH/XS domain-containing protein [Arabidopsis th...    81   3e-17

>ref|XP_002890022.1| XH/XS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335864|gb|EFH66281.1| XH/XS domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 733

 Score = 85.5 bits (210), Expect(2) = 1e-18
 Identities = 49/120 (40%), Positives = 63/120 (52%)
 Frame = -3

Query: 721 IGVKHMGDLDIKPFRIACYRKYPSNIADDKAAQLCSLWQTRLGDSNWYPFKVVHCGXXXX 542
           IGVK MG LD KPF+     KYP+  AD+KAA+LCSLW+  LGDS W+P KVV       
Sbjct: 596 IGVKRMGALDEKPFQKLAKEKYPAEEADEKAAELCSLWEEHLGDSAWHPIKVVVKDGTAK 655

Query: 541 XXXXXXXXXXXXXXXXXXXXG*GRGTWLVIDEEDKKLNDLNEDVGSEVYEAVCASLKELN 362
                                        ++EED+KL +L +++G EVY AV  +LKE N
Sbjct: 656 EE---------------------------LNEEDEKLQELRKELGEEVYAAVTQALKERN 688



 Score = 33.5 bits (75), Expect(2) = 1e-18
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -1

Query: 261 VEELWNFKENHKASQKEAITLLL 193
           V ELWNF+EN KA+ KE +  LL
Sbjct: 698 VPELWNFRENRKATIKEGVVYLL 720


>ref|XP_004139640.1| PREDICTED: uncharacterized protein LOC101205093 [Cucumis sativus]
           gi|449522628|ref|XP_004168328.1| PREDICTED:
           uncharacterized LOC101205093 [Cucumis sativus]
          Length = 632

 Score = 84.7 bits (208), Expect(2) = 2e-18
 Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
 Frame = -3

Query: 751 MISGWKDYLA-----IGVKHMGDLDIKPFRIACYRKYPSNIADDKAAQLCSLWQTRLGDS 587
           +ISG +D  +     IG+K MGD+DIKPF+  C  K+  + A  +A+ LCSLWQ  L D 
Sbjct: 482 LISGLQDQSSNARVNIGIKRMGDIDIKPFQNTCKHKFSPDEAMVQASTLCSLWQDNLTDP 541

Query: 586 NWYPFKVVHCGXXXXXXXXXXXXXXXXXXXXXXXXG*GRGTWLVIDEEDKKLNDLNEDVG 407
           NW+PFKVV                                    IDE+D+KL  L ++ G
Sbjct: 542 NWHPFKVVTIDGDSQEN---------------------------IDEDDEKLKGLKQEWG 574

Query: 406 SEVYEAVCASLKELN 362
            E+Y AV  +LKE+N
Sbjct: 575 GEIYNAVVTALKEMN 589



 Score = 33.5 bits (75), Expect(2) = 2e-18
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -1

Query: 261 VEELWNFKENHKASQKEAITLLLK 190
           V ELWNFKE+ KA+ KE I  ++K
Sbjct: 599 VPELWNFKEDRKATLKEVINYIVK 622


>ref|XP_002280898.2| PREDICTED: uncharacterized protein LOC100260350 [Vitis vinifera]
          Length = 713

 Score = 85.1 bits (209), Expect(2) = 7e-18
 Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
 Frame = -3

Query: 721 IGVKHMGDLDIKPFRIACYRKYPSNIADDKAAQLCSLWQTRLGDSNWYPFKVV----HCG 554
           I VK MGDLD KPF+ A  RKY    A++KA + CSLW+  L DS+W+PFKV+    +C 
Sbjct: 578 IAVKQMGDLDTKPFQKAMKRKYSEEEANEKALEWCSLWEQNLTDSSWHPFKVITDKGNCK 637

Query: 553 XXXXXXXXXXXXXXXXXXXXXXXXG*GRGTWLVIDEEDKKLNDLNEDVGSEVYEAVCASL 374
                                           +IDEED++L DL  + G EVY AV  +L
Sbjct: 638 E-------------------------------IIDEEDERLKDLQNEYGDEVYMAVTDAL 666

Query: 373 KELN 362
           KE+N
Sbjct: 667 KEMN 670



 Score = 31.6 bits (70), Expect(2) = 7e-18
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1

Query: 261 VEELWNFKENHKASQKEAITLLLK 190
           V ELWNFKE  KA+ +E +  +LK
Sbjct: 680 VSELWNFKEGRKATLREGVEDILK 703


>emb|CBI16121.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score = 85.1 bits (209), Expect(2) = 7e-18
 Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
 Frame = -3

Query: 721 IGVKHMGDLDIKPFRIACYRKYPSNIADDKAAQLCSLWQTRLGDSNWYPFKVV----HCG 554
           I VK MGDLD KPF+ A  RKY    A++KA + CSLW+  L DS+W+PFKV+    +C 
Sbjct: 491 IAVKQMGDLDTKPFQKAMKRKYSEEEANEKALEWCSLWEQNLTDSSWHPFKVITDKGNCK 550

Query: 553 XXXXXXXXXXXXXXXXXXXXXXXXG*GRGTWLVIDEEDKKLNDLNEDVGSEVYEAVCASL 374
                                           +IDEED++L DL  + G EVY AV  +L
Sbjct: 551 E-------------------------------IIDEEDERLKDLQNEYGDEVYMAVTDAL 579

Query: 373 KELN 362
           KE+N
Sbjct: 580 KEMN 583



 Score = 31.6 bits (70), Expect(2) = 7e-18
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1

Query: 261 VEELWNFKENHKASQKEAITLLLK 190
           V ELWNFKE  KA+ +E +  +LK
Sbjct: 593 VSELWNFKEGRKATLREGVEDILK 616


>ref|NP_172834.1| XH/XS domain-containing protein [Arabidopsis thaliana]
           gi|8778384|gb|AAF79392.1|AC068197_2 F16A14.2
           [Arabidopsis thaliana] gi|332190948|gb|AEE29069.1| XH/XS
           domain-containing protein [Arabidopsis thaliana]
          Length = 736

 Score = 80.9 bits (198), Expect(2) = 3e-17
 Identities = 47/120 (39%), Positives = 60/120 (50%)
 Frame = -3

Query: 721 IGVKHMGDLDIKPFRIACYRKYPSNIADDKAAQLCSLWQTRLGDSNWYPFKVVHCGXXXX 542
           IGVK MG LD  PF+     KYP+  AD KA +LCSLW+  LGDS W+P KVV       
Sbjct: 599 IGVKRMGALDETPFKKVAKEKYPAVEADKKAEELCSLWEEHLGDSAWHPIKVVEKDGIAK 658

Query: 541 XXXXXXXXXXXXXXXXXXXXG*GRGTWLVIDEEDKKLNDLNEDVGSEVYEAVCASLKELN 362
                                        ++EED+KL +L +++G EVY AV  +LKE N
Sbjct: 659 EE---------------------------LNEEDEKLQELRKELGEEVYAAVTQALKERN 691



 Score = 33.5 bits (75), Expect(2) = 3e-17
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -1

Query: 261 VEELWNFKENHKASQKEAITLLL 193
           V ELWNFK+N KAS KE +  L+
Sbjct: 701 VPELWNFKQNRKASIKEGVVYLV 723


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