BLASTX nr result
ID: Coptis24_contig00005457
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005457 (756 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002890022.1| XH/XS domain-containing protein [Arabidopsis... 86 1e-18 ref|XP_004139640.1| PREDICTED: uncharacterized protein LOC101205... 85 2e-18 ref|XP_002280898.2| PREDICTED: uncharacterized protein LOC100260... 85 7e-18 emb|CBI16121.3| unnamed protein product [Vitis vinifera] 85 7e-18 ref|NP_172834.1| XH/XS domain-containing protein [Arabidopsis th... 81 3e-17 >ref|XP_002890022.1| XH/XS domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297335864|gb|EFH66281.1| XH/XS domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 733 Score = 85.5 bits (210), Expect(2) = 1e-18 Identities = 49/120 (40%), Positives = 63/120 (52%) Frame = -3 Query: 721 IGVKHMGDLDIKPFRIACYRKYPSNIADDKAAQLCSLWQTRLGDSNWYPFKVVHCGXXXX 542 IGVK MG LD KPF+ KYP+ AD+KAA+LCSLW+ LGDS W+P KVV Sbjct: 596 IGVKRMGALDEKPFQKLAKEKYPAEEADEKAAELCSLWEEHLGDSAWHPIKVVVKDGTAK 655 Query: 541 XXXXXXXXXXXXXXXXXXXXG*GRGTWLVIDEEDKKLNDLNEDVGSEVYEAVCASLKELN 362 ++EED+KL +L +++G EVY AV +LKE N Sbjct: 656 EE---------------------------LNEEDEKLQELRKELGEEVYAAVTQALKERN 688 Score = 33.5 bits (75), Expect(2) = 1e-18 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = -1 Query: 261 VEELWNFKENHKASQKEAITLLL 193 V ELWNF+EN KA+ KE + LL Sbjct: 698 VPELWNFRENRKATIKEGVVYLL 720 >ref|XP_004139640.1| PREDICTED: uncharacterized protein LOC101205093 [Cucumis sativus] gi|449522628|ref|XP_004168328.1| PREDICTED: uncharacterized LOC101205093 [Cucumis sativus] Length = 632 Score = 84.7 bits (208), Expect(2) = 2e-18 Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 5/135 (3%) Frame = -3 Query: 751 MISGWKDYLA-----IGVKHMGDLDIKPFRIACYRKYPSNIADDKAAQLCSLWQTRLGDS 587 +ISG +D + IG+K MGD+DIKPF+ C K+ + A +A+ LCSLWQ L D Sbjct: 482 LISGLQDQSSNARVNIGIKRMGDIDIKPFQNTCKHKFSPDEAMVQASTLCSLWQDNLTDP 541 Query: 586 NWYPFKVVHCGXXXXXXXXXXXXXXXXXXXXXXXXG*GRGTWLVIDEEDKKLNDLNEDVG 407 NW+PFKVV IDE+D+KL L ++ G Sbjct: 542 NWHPFKVVTIDGDSQEN---------------------------IDEDDEKLKGLKQEWG 574 Query: 406 SEVYEAVCASLKELN 362 E+Y AV +LKE+N Sbjct: 575 GEIYNAVVTALKEMN 589 Score = 33.5 bits (75), Expect(2) = 2e-18 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = -1 Query: 261 VEELWNFKENHKASQKEAITLLLK 190 V ELWNFKE+ KA+ KE I ++K Sbjct: 599 VPELWNFKEDRKATLKEVINYIVK 622 >ref|XP_002280898.2| PREDICTED: uncharacterized protein LOC100260350 [Vitis vinifera] Length = 713 Score = 85.1 bits (209), Expect(2) = 7e-18 Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 4/124 (3%) Frame = -3 Query: 721 IGVKHMGDLDIKPFRIACYRKYPSNIADDKAAQLCSLWQTRLGDSNWYPFKVV----HCG 554 I VK MGDLD KPF+ A RKY A++KA + CSLW+ L DS+W+PFKV+ +C Sbjct: 578 IAVKQMGDLDTKPFQKAMKRKYSEEEANEKALEWCSLWEQNLTDSSWHPFKVITDKGNCK 637 Query: 553 XXXXXXXXXXXXXXXXXXXXXXXXG*GRGTWLVIDEEDKKLNDLNEDVGSEVYEAVCASL 374 +IDEED++L DL + G EVY AV +L Sbjct: 638 E-------------------------------IIDEEDERLKDLQNEYGDEVYMAVTDAL 666 Query: 373 KELN 362 KE+N Sbjct: 667 KEMN 670 Score = 31.6 bits (70), Expect(2) = 7e-18 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -1 Query: 261 VEELWNFKENHKASQKEAITLLLK 190 V ELWNFKE KA+ +E + +LK Sbjct: 680 VSELWNFKEGRKATLREGVEDILK 703 >emb|CBI16121.3| unnamed protein product [Vitis vinifera] Length = 626 Score = 85.1 bits (209), Expect(2) = 7e-18 Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 4/124 (3%) Frame = -3 Query: 721 IGVKHMGDLDIKPFRIACYRKYPSNIADDKAAQLCSLWQTRLGDSNWYPFKVV----HCG 554 I VK MGDLD KPF+ A RKY A++KA + CSLW+ L DS+W+PFKV+ +C Sbjct: 491 IAVKQMGDLDTKPFQKAMKRKYSEEEANEKALEWCSLWEQNLTDSSWHPFKVITDKGNCK 550 Query: 553 XXXXXXXXXXXXXXXXXXXXXXXXG*GRGTWLVIDEEDKKLNDLNEDVGSEVYEAVCASL 374 +IDEED++L DL + G EVY AV +L Sbjct: 551 E-------------------------------IIDEEDERLKDLQNEYGDEVYMAVTDAL 579 Query: 373 KELN 362 KE+N Sbjct: 580 KEMN 583 Score = 31.6 bits (70), Expect(2) = 7e-18 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -1 Query: 261 VEELWNFKENHKASQKEAITLLLK 190 V ELWNFKE KA+ +E + +LK Sbjct: 593 VSELWNFKEGRKATLREGVEDILK 616 >ref|NP_172834.1| XH/XS domain-containing protein [Arabidopsis thaliana] gi|8778384|gb|AAF79392.1|AC068197_2 F16A14.2 [Arabidopsis thaliana] gi|332190948|gb|AEE29069.1| XH/XS domain-containing protein [Arabidopsis thaliana] Length = 736 Score = 80.9 bits (198), Expect(2) = 3e-17 Identities = 47/120 (39%), Positives = 60/120 (50%) Frame = -3 Query: 721 IGVKHMGDLDIKPFRIACYRKYPSNIADDKAAQLCSLWQTRLGDSNWYPFKVVHCGXXXX 542 IGVK MG LD PF+ KYP+ AD KA +LCSLW+ LGDS W+P KVV Sbjct: 599 IGVKRMGALDETPFKKVAKEKYPAVEADKKAEELCSLWEEHLGDSAWHPIKVVEKDGIAK 658 Query: 541 XXXXXXXXXXXXXXXXXXXXG*GRGTWLVIDEEDKKLNDLNEDVGSEVYEAVCASLKELN 362 ++EED+KL +L +++G EVY AV +LKE N Sbjct: 659 EE---------------------------LNEEDEKLQELRKELGEEVYAAVTQALKERN 691 Score = 33.5 bits (75), Expect(2) = 3e-17 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = -1 Query: 261 VEELWNFKENHKASQKEAITLLL 193 V ELWNFK+N KAS KE + L+ Sbjct: 701 VPELWNFKQNRKASIKEGVVYLV 723