BLASTX nr result

ID: Coptis24_contig00005454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005454
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ79231.1| cellulose synthase-like protein CslG [Nicotiana t...   209   2e-52
ref|XP_002265126.1| PREDICTED: cellulose synthase-like protein G...   209   2e-52
gb|AFZ78599.1| cellulose synthase-like protein [Populus tomentosa]    205   3e-51
gb|AFZ78598.1| cellulose synthase-like protein [Populus tomentosa]    205   3e-51
gb|AFZ78596.1| cellulose synthase-like protein [Populus tomentosa]    205   3e-51

>gb|AAZ79231.1| cellulose synthase-like protein CslG [Nicotiana tabacum]
          Length = 744

 Score =  209 bits (532), Expect = 2e-52
 Identities = 91/138 (65%), Positives = 114/138 (82%)
 Frame = -3

Query: 416 PNHVVDRSIQSEAVMALAHNVASCKFEDQTNWGSKMGFRYGTLVEDYFSGYRLLCEGWKS 237
           P+H V++ IQ+  V+ LAH VASC +E+++NWGSKMGFRYG+LVEDY++GYRL CEGWKS
Sbjct: 410 PDHDVNKPIQAHEVLQLAHQVASCNYENESNWGSKMGFRYGSLVEDYYTGYRLQCEGWKS 469

Query: 236 VFCDPDRPAFLGDVPITLNDSLSQNRRWCVGFSEVTFSKYCPITFGVRSMGLFMGLAFAH 57
           VFC+P RPAFLGDVPI+L+D +SQN+RW VG  EV FSKY P+TFGVRSMG  M   +AH
Sbjct: 470 VFCNPKRPAFLGDVPISLHDVISQNKRWSVGLLEVAFSKYSPLTFGVRSMGFVMAHCYAH 529

Query: 56  LSFWPIYSVPIIIYGILP 3
            +FWPI+S+PI IY  +P
Sbjct: 530 YAFWPIWSLPIAIYAFIP 547


>ref|XP_002265126.1| PREDICTED: cellulose synthase-like protein G3 [Vitis vinifera]
           gi|297742362|emb|CBI34511.3| unnamed protein product
           [Vitis vinifera]
          Length = 741

 Score =  209 bits (531), Expect = 2e-52
 Identities = 89/138 (64%), Positives = 114/138 (82%)
 Frame = -3

Query: 416 PNHVVDRSIQSEAVMALAHNVASCKFEDQTNWGSKMGFRYGTLVEDYFSGYRLLCEGWKS 237
           P HVVD+ I+S+ V+ALAH+VA C +E+++NWGSK+GFRYG+LVEDY++GYRL CEGW+S
Sbjct: 408 PGHVVDKPIRSQEVLALAHHVAGCNYENESNWGSKVGFRYGSLVEDYYTGYRLQCEGWRS 467

Query: 236 VFCDPDRPAFLGDVPITLNDSLSQNRRWCVGFSEVTFSKYCPITFGVRSMGLFMGLAFAH 57
            FC PDR AFLGD+PI+LND LSQN+RW +G  EV FSKY P+TFG  + G  + L++AH
Sbjct: 468 RFCQPDREAFLGDIPISLNDVLSQNKRWSIGLLEVAFSKYSPVTFGTMATGPLLALSYAH 527

Query: 56  LSFWPIYSVPIIIYGILP 3
            +FWPI+SVPI IYG LP
Sbjct: 528 YAFWPIWSVPITIYGFLP 545


>gb|AFZ78599.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 694

 Score =  205 bits (522), Expect = 3e-51
 Identities = 87/138 (63%), Positives = 115/138 (83%)
 Frame = -3

Query: 416 PNHVVDRSIQSEAVMALAHNVASCKFEDQTNWGSKMGFRYGTLVEDYFSGYRLLCEGWKS 237
           P+++VD+ IQS++V+A AH VA+C +E ++NWGSK+GFRYG+L EDY +G+R+ CEGWKS
Sbjct: 363 PDYIVDKPIQSQSVLAKAHQVATCNYESRSNWGSKIGFRYGSLSEDYHTGFRMQCEGWKS 422

Query: 236 VFCDPDRPAFLGDVPITLNDSLSQNRRWCVGFSEVTFSKYCPITFGVRSMGLFMGLAFAH 57
           +FCDPDRPAFLGDVPITLND+L+Q +RW +G  EV FSKY P TFGV+++GL MGLA+A 
Sbjct: 423 IFCDPDRPAFLGDVPITLNDALNQQKRWSIGLLEVGFSKYSPATFGVKAIGLLMGLAYAQ 482

Query: 56  LSFWPIYSVPIIIYGILP 3
            +FW I+S+PI  Y  LP
Sbjct: 483 SAFWAIWSIPITTYAFLP 500


>gb|AFZ78598.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 784

 Score =  205 bits (522), Expect = 3e-51
 Identities = 86/138 (62%), Positives = 114/138 (82%)
 Frame = -3

Query: 416 PNHVVDRSIQSEAVMALAHNVASCKFEDQTNWGSKMGFRYGTLVEDYFSGYRLLCEGWKS 237
           P+HVVD+ IQS++V+ALAH VA C +E+QT+WGSK+GFRYG+LVEDY++G+RL CEGWK 
Sbjct: 453 PDHVVDKPIQSQSVLALAHQVADCNYENQTDWGSKIGFRYGSLVEDYYTGFRLQCEGWKG 512

Query: 236 VFCDPDRPAFLGDVPITLNDSLSQNRRWCVGFSEVTFSKYCPITFGVRSMGLFMGLAFAH 57
           +FC+P+RPAF GDVPI L D+L+Q +RW +G  EV FSK+ P TFGVRS G+ MGL +A 
Sbjct: 513 IFCNPERPAFFGDVPINLADALNQQKRWSIGLLEVGFSKHSPATFGVRSKGILMGLGYAQ 572

Query: 56  LSFWPIYSVPIIIYGILP 3
           ++FWP++S+PI  Y  LP
Sbjct: 573 VAFWPLWSIPITAYAFLP 590


>gb|AFZ78596.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 739

 Score =  205 bits (522), Expect = 3e-51
 Identities = 87/138 (63%), Positives = 115/138 (83%)
 Frame = -3

Query: 416 PNHVVDRSIQSEAVMALAHNVASCKFEDQTNWGSKMGFRYGTLVEDYFSGYRLLCEGWKS 237
           P+++VD+ IQS++V+A AH VA+C +E ++NWGSK+GFRYG+L EDY +G+R+ CEGWKS
Sbjct: 408 PDYIVDKPIQSQSVLAKAHQVATCNYESRSNWGSKIGFRYGSLSEDYHTGFRMQCEGWKS 467

Query: 236 VFCDPDRPAFLGDVPITLNDSLSQNRRWCVGFSEVTFSKYCPITFGVRSMGLFMGLAFAH 57
           +FCDPDRPAFLGDVPITLND+L+Q +RW +G  EV FSKY P TFGV+++GL MGLA+A 
Sbjct: 468 IFCDPDRPAFLGDVPITLNDALNQQKRWSIGLLEVGFSKYSPATFGVKAIGLLMGLAYAQ 527

Query: 56  LSFWPIYSVPIIIYGILP 3
            +FW I+S+PI  Y  LP
Sbjct: 528 SAFWAIWSIPITTYAFLP 545


Top