BLASTX nr result
ID: Coptis24_contig00005443
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005443 (373 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002301659.1| predicted protein [Populus trichocarpa] gi|2... 65 8e-09 ref|XP_003615746.1| Nbs-lrr resistance protein [Medicago truncat... 62 4e-08 ref|XP_003615681.1| NBS-LRR resistance protein [Medicago truncat... 62 6e-08 ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichoca... 62 6e-08 ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|2... 62 6e-08 >ref|XP_002301659.1| predicted protein [Populus trichocarpa] gi|222843385|gb|EEE80932.1| predicted protein [Populus trichocarpa] Length = 254 Score = 64.7 bits (156), Expect = 8e-09 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 2/69 (2%) Frame = +1 Query: 109 LPQGFNQLTAIQTLEFVNCEFLDFTPEDLKHLPMLQLLKVEGCPILEERCRK--RESWTT 282 L +G LT ++ LE VNC L+ PE ++HL L+ L +EGCP L++RC K E W Sbjct: 185 LSEGVQHLTVLEDLELVNCPELNSLPESIQHLTSLRSLFIEGCPNLKKRCEKDLGEDWPK 244 Query: 283 NSHIPKIEL 309 +HIPKI + Sbjct: 245 IAHIPKINI 253 >ref|XP_003615746.1| Nbs-lrr resistance protein [Medicago truncatula] gi|355517081|gb|AES98704.1| Nbs-lrr resistance protein [Medicago truncatula] Length = 1014 Score = 62.4 bits (150), Expect = 4e-08 Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 2/68 (2%) Frame = +1 Query: 109 LPQGFNQLTAIQTLEFVNCEFLDFTPEDLKHLPMLQLLKVEGCPILEERCRKR--ESWTT 282 LP+G LT+++ L+ +C+ L PE ++HL L++L + CP LEERC++ E W Sbjct: 943 LPEGIRHLTSLRNLQIYSCKGLRCLPEGIRHLTSLEVLTIWECPTLEERCKEGTWEDWDK 1002 Query: 283 NSHIPKIE 306 +HIPKI+ Sbjct: 1003 IAHIPKIQ 1010 >ref|XP_003615681.1| NBS-LRR resistance protein [Medicago truncatula] gi|355517016|gb|AES98639.1| NBS-LRR resistance protein [Medicago truncatula] Length = 1016 Score = 61.6 bits (148), Expect = 6e-08 Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%) Frame = +1 Query: 115 QGFNQLTAIQTLEFVNCEFLDFTPEDLKHLPMLQLLKVEGCPILEERCRKR--ESWTTNS 288 Q + L +++TL +CE L PE ++HL L+LL + GC L+ERC+KR E W S Sbjct: 950 QNWEGLQSLRTLHIYSCEGLRCLPEGIRHLTSLELLTIIGCRTLKERCKKRTGEDWDKIS 1009 Query: 289 HIPKIE 306 HIPKI+ Sbjct: 1010 HIPKIQ 1015 >ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichocarpa] gi|222844655|gb|EEE82202.1| nbs-lrr resistance protein [Populus trichocarpa] Length = 1063 Score = 61.6 bits (148), Expect = 6e-08 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 2/70 (2%) Frame = +1 Query: 109 LPQGFNQLTAIQTLEFVNCEFLDFTPEDLKHLPMLQLLKVEGCPILEERCRK--RESWTT 282 L +G LTA++ L NC L+ PE ++HL LQ L + GCP L++RC K E W Sbjct: 994 LSEGVRHLTALENLSLYNCPELNSLPESIQHLTSLQSLSIVGCPNLKKRCEKDLGEDWPK 1053 Query: 283 NSHIPKIELN 312 +HI KI +N Sbjct: 1054 IAHIRKIRIN 1063 >ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|222844654|gb|EEE82201.1| predicted protein [Populus trichocarpa] Length = 475 Score = 61.6 bits (148), Expect = 6e-08 Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 2/70 (2%) Frame = +1 Query: 109 LPQGFNQLTAIQTLEFVNCEFLDFTPEDLKHLPMLQLLKVEGCPILEERCRK--RESWTT 282 L +G LTA++ LE NC L+ PE ++HL LQ L + CP LE+RC K E W Sbjct: 404 LTEGVRHLTALEDLELGNCPELNSLPESIQHLTSLQSLSIWKCPNLEKRCEKDLGEDWPK 463 Query: 283 NSHIPKIELN 312 +HIP+I N Sbjct: 464 IAHIPQISFN 473