BLASTX nr result

ID: Coptis24_contig00005440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005440
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40105.1| putative UDP-glucose dehydrogenase 1 [Nicotiana t...   129   7e-41
gb|AAT40106.1| putative UDP-glucose dehydrogenase 2 [Nicotiana t...   129   7e-41
tpg|DAA51475.1| TPA: UDP-glucose 6-dehydrogenase [Zea mays]           129   1e-40
ref|NP_001146018.1| uncharacterized protein LOC100279549 [Zea ma...   129   1e-40
gb|ACL53127.1| unknown [Zea mays] gi|413933020|gb|AFW67571.1| UD...   129   1e-40

>gb|AAT40105.1| putative UDP-glucose dehydrogenase 1 [Nicotiana tabacum]
          Length = 545

 Score =  129 bits (324), Expect(3) = 7e-41
 Identities = 66/80 (82%), Positives = 70/80 (87%)
 Frame = -3

Query: 240 QGRNFFFSTDVEKHVEEADIIFVLIKTPTKT*GLGAGKAADLTYWESAARMIADVSKHDK 61
           +GRN FFSTDVEKHV EADI+FV + TPTKT GLGAGKAADLTYWESAARMIADVSK DK
Sbjct: 62  RGRNLFFSTDVEKHVREADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDK 121

Query: 60  IVVEKSKVLVETAEVIEMIL 1
           IVVEKS V V+TAE IE IL
Sbjct: 122 IVVEKSTVPVKTAEAIEKIL 141



 Score = 47.0 bits (110), Expect(3) = 7e-41
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = -2

Query: 385 GSPTLAVIALKCPNIEVVVIGISVPWITA 299
           G PT+AVIALKCP+IEV V+ ISVP ITA
Sbjct: 13  GGPTMAVIALKCPSIEVAVVDISVPRITA 41



 Score = 38.1 bits (87), Expect(3) = 7e-41
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = -1

Query: 296 DSDKLPIYEPGQDDVVKQCR 237
           +SD+LPIYEPG +DVVK+CR
Sbjct: 43  NSDQLPIYEPGLEDVVKECR 62


>gb|AAT40106.1| putative UDP-glucose dehydrogenase 2 [Nicotiana tabacum]
          Length = 524

 Score =  129 bits (324), Expect(3) = 7e-41
 Identities = 66/80 (82%), Positives = 70/80 (87%)
 Frame = -3

Query: 240 QGRNFFFSTDVEKHVEEADIIFVLIKTPTKT*GLGAGKAADLTYWESAARMIADVSKHDK 61
           +GRN FFSTDVEKHV EADI+FV + TPTKT GLGAGKAADLTYWESAARMIADVSK DK
Sbjct: 62  RGRNLFFSTDVEKHVREADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDK 121

Query: 60  IVVEKSKVLVETAEVIEMIL 1
           IVVEKS V V+TAE IE IL
Sbjct: 122 IVVEKSTVPVKTAEAIEKIL 141



 Score = 47.0 bits (110), Expect(3) = 7e-41
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = -2

Query: 385 GSPTLAVIALKCPNIEVVVIGISVPWITA 299
           G PT+AVIALKCP+IEV V+ ISVP ITA
Sbjct: 13  GGPTMAVIALKCPSIEVAVVDISVPRITA 41



 Score = 38.1 bits (87), Expect(3) = 7e-41
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = -1

Query: 296 DSDKLPIYEPGQDDVVKQCR 237
           +SD+LPIYEPG +DVVK+CR
Sbjct: 43  NSDQLPIYEPGLEDVVKECR 62


>tpg|DAA51475.1| TPA: UDP-glucose 6-dehydrogenase [Zea mays]
          Length = 507

 Score =  129 bits (324), Expect(3) = 1e-40
 Identities = 67/80 (83%), Positives = 70/80 (87%)
 Frame = -3

Query: 240 QGRNFFFSTDVEKHVEEADIIFVLIKTPTKT*GLGAGKAADLTYWESAARMIADVSKHDK 61
           +GRN FFSTDVEKHV EADIIFV + TPTKT GLGAGKAADLTYWESAARMIADVSK DK
Sbjct: 89  RGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDK 148

Query: 60  IVVEKSKVLVETAEVIEMIL 1
           IVVEKS V V+TAE IE IL
Sbjct: 149 IVVEKSTVPVKTAEAIEKIL 168



 Score = 43.9 bits (102), Expect(3) = 1e-40
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -2

Query: 385 GSPTLAVIALKCPNIEVVVIGISVPWITA 299
           G PT+AVIALKCP+IEVVV+ IS P I A
Sbjct: 40  GGPTMAVIALKCPDIEVVVVDISKPRIEA 68



 Score = 40.0 bits (92), Expect(3) = 1e-40
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = -1

Query: 296 DSDKLPIYEPGQDDVVKQCR 237
           +SD LPIYEPG DDVVKQCR
Sbjct: 70  NSDTLPIYEPGLDDVVKQCR 89


>ref|NP_001146018.1| uncharacterized protein LOC100279549 [Zea mays]
           gi|219885339|gb|ACL53044.1| unknown [Zea mays]
          Length = 507

 Score =  129 bits (324), Expect(3) = 1e-40
 Identities = 67/80 (83%), Positives = 70/80 (87%)
 Frame = -3

Query: 240 QGRNFFFSTDVEKHVEEADIIFVLIKTPTKT*GLGAGKAADLTYWESAARMIADVSKHDK 61
           +GRN FFSTDVEKHV EADIIFV + TPTKT GLGAGKAADLTYWESAARMIADVSK DK
Sbjct: 89  RGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDK 148

Query: 60  IVVEKSKVLVETAEVIEMIL 1
           IVVEKS V V+TAE IE IL
Sbjct: 149 IVVEKSTVPVKTAEAIEKIL 168



 Score = 43.9 bits (102), Expect(3) = 1e-40
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -2

Query: 385 GSPTLAVIALKCPNIEVVVIGISVPWITA 299
           G PT+AVIALKCP+IEVVV+ IS P I A
Sbjct: 40  GGPTMAVIALKCPDIEVVVVDISKPRIEA 68



 Score = 40.0 bits (92), Expect(3) = 1e-40
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = -1

Query: 296 DSDKLPIYEPGQDDVVKQCR 237
           +SD LPIYEPG DDVVKQCR
Sbjct: 70  NSDTLPIYEPGLDDVVKQCR 89


>gb|ACL53127.1| unknown [Zea mays] gi|413933020|gb|AFW67571.1| UDP-glucose
           6-dehydrogenase isoform 1 [Zea mays]
           gi|413933021|gb|AFW67572.1| UDP-glucose 6-dehydrogenase
           isoform 2 [Zea mays]
          Length = 480

 Score =  129 bits (324), Expect(3) = 1e-40
 Identities = 67/80 (83%), Positives = 70/80 (87%)
 Frame = -3

Query: 240 QGRNFFFSTDVEKHVEEADIIFVLIKTPTKT*GLGAGKAADLTYWESAARMIADVSKHDK 61
           +GRN FFSTDVEKHV EADIIFV + TPTKT GLGAGKAADLTYWESAARMIADVSK DK
Sbjct: 62  RGRNLFFSTDVEKHVAEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDK 121

Query: 60  IVVEKSKVLVETAEVIEMIL 1
           IVVEKS V V+TAE IE IL
Sbjct: 122 IVVEKSTVPVKTAEAIEKIL 141



 Score = 43.9 bits (102), Expect(3) = 1e-40
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -2

Query: 385 GSPTLAVIALKCPNIEVVVIGISVPWITA 299
           G PT+AVIALKCP+IEVVV+ IS P I A
Sbjct: 13  GGPTMAVIALKCPDIEVVVVDISKPRIEA 41



 Score = 40.0 bits (92), Expect(3) = 1e-40
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = -1

Query: 296 DSDKLPIYEPGQDDVVKQCR 237
           +SD LPIYEPG DDVVKQCR
Sbjct: 43  NSDTLPIYEPGLDDVVKQCR 62


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