BLASTX nr result

ID: Coptis24_contig00005437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005437
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18973.3| unnamed protein product [Vitis vinifera]              157   3e-36
ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248...   155   8e-36
ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793...   147   3e-33
ref|XP_002329176.1| predicted protein [Populus trichocarpa] gi|2...   147   3e-33
ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thalia...   142   9e-32

>emb|CBI18973.3| unnamed protein product [Vitis vinifera]
          Length = 734

 Score =  157 bits (396), Expect = 3e-36
 Identities = 77/136 (56%), Positives = 100/136 (73%), Gaps = 4/136 (2%)
 Frame = +2

Query: 2    GSWDGTIR*WSLSNHNPLAVLGEDTPLY*RSPWTVTC----LLQSHENGCVKLWKNDVLS 169
            GSWDGTIR WSL++H+PL VLGEDTP    S  ++      LL +HE+GC+K+W+NDV  
Sbjct: 599  GSWDGTIRLWSLNDHSPLTVLGEDTPGNVISVLSLKADHHMLLAAHEDGCLKIWRNDVFM 658

Query: 170  SSIETQSGAIFALDIKEKLLFLGGWNKGVDVKEVSGDELHIDTRSIGSIACSSVITALLY 349
             SI+   GA+FA+ +  K LF GGW+K V+V+E+SGD+L I+   +GSIA  S +TALLY
Sbjct: 659  KSIQAHDGAVFAVAMGGKWLFTGGWDKSVNVQEISGDDLQIEALPVGSIASDSAVTALLY 718

Query: 350  WEGKLFVGFAVRIIKV 397
            W+GKLFVG A RIIKV
Sbjct: 719  WQGKLFVGCADRIIKV 734


>ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
          Length = 1817

 Score =  155 bits (392), Expect = 8e-36
 Identities = 76/135 (56%), Positives = 99/135 (73%), Gaps = 4/135 (2%)
 Frame = +2

Query: 2    GSWDGTIR*WSLSNHNPLAVLGEDTPLY*RSPWTVTC----LLQSHENGCVKLWKNDVLS 169
            GSWDGTIR WSL++H+PL VLGEDTP    S  ++      LL +HE+GC+K+W+NDV  
Sbjct: 683  GSWDGTIRLWSLNDHSPLTVLGEDTPGNVISVLSLKADHHMLLAAHEDGCLKIWRNDVFM 742

Query: 170  SSIETQSGAIFALDIKEKLLFLGGWNKGVDVKEVSGDELHIDTRSIGSIACSSVITALLY 349
             SI+   GA+FA+ +  K LF GGW+K V+V+E+SGD+L I+   +GSIA  S +TALLY
Sbjct: 743  KSIQAHDGAVFAVAMGGKWLFTGGWDKSVNVQEISGDDLQIEALPVGSIASDSAVTALLY 802

Query: 350  WEGKLFVGFAVRIIK 394
            W+GKLFVG A RIIK
Sbjct: 803  WQGKLFVGCADRIIK 817


>ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
          Length = 1815

 Score =  147 bits (370), Expect = 3e-33
 Identities = 68/135 (50%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
 Frame = +2

Query: 2    GSWDGTIR*WSLSNHNPLAVLGEDTPLY*RSPWTVTC----LLQSHENGCVKLWKNDVLS 169
            GSWDGT+R WSL++H+PL VLGED P   +S   +T     L+ +HENGC+K+W+NDV  
Sbjct: 685  GSWDGTVRLWSLNDHSPLTVLGEDPPAEMKSILAITVDRHLLVAAHENGCIKVWRNDVFM 744

Query: 170  SSIETQSGAIFALDIKEKLLFLGGWNKGVDVKEVSGDELHIDTRSIGSIACSSVITALLY 349
            +S     GAIFA+ ++ K L+ GGW+K V+++E+SGDE  +D ++ GSI CS+V TA+L 
Sbjct: 745  NSKTLHKGAIFAMSMQGKCLYTGGWDKNVNIQELSGDEFELDVKAYGSIPCSAVATAILC 804

Query: 350  WEGKLFVGFAVRIIK 394
             +GKL+VG+A + IK
Sbjct: 805  SQGKLYVGYADKSIK 819


>ref|XP_002329176.1| predicted protein [Populus trichocarpa] gi|222870957|gb|EEF08088.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  147 bits (370), Expect = 3e-33
 Identities = 76/137 (55%), Positives = 95/137 (69%), Gaps = 4/137 (2%)
 Frame = +2

Query: 2   GSWDGTIR*WSLSNHNPLAVLGEDTPLY*RSPWTVTC----LLQSHENGCVKLWKNDVLS 169
           GSWDGTIR WSL++H+PL VLG D P    S  +VT     L+ +HENG +K W++DV  
Sbjct: 115 GSWDGTIRLWSLTDHSPLTVLGNDLPGTATSVLSVTANQNILVAAHENGQIKAWRDDVFK 174

Query: 170 SSIETQSGAIFALDIKEKLLFLGGWNKGVDVKEVSGDELHIDTRSIGSIACSSVITALLY 349
            S +  SGAI A  ++ K LF GGW+K V+V+E+SGDE  +DTR IGSI   SV+TALL 
Sbjct: 175 KSTQCHSGAILACVMEGKWLFTGGWDKIVNVQELSGDEFQVDTRPIGSIPGGSVVTALLC 234

Query: 350 WEGKLFVGFAVRIIKVY 400
           W+GKLFVG   R IKVY
Sbjct: 235 WQGKLFVGHGDRTIKVY 251


>ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thaliana]
            gi|17529236|gb|AAL38845.1| putative SecA-type chloroplast
            protein transport factor [Arabidopsis thaliana]
            gi|20465933|gb|AAM20152.1| putative SecA-type chloroplast
            transport factor protein [Arabidopsis thaliana]
            gi|110739333|dbj|BAF01579.1| hypothetical protein
            [Arabidopsis thaliana] gi|332192014|gb|AEE30135.1| zinc
            ion binding protein [Arabidopsis thaliana]
          Length = 811

 Score =  142 bits (357), Expect = 9e-32
 Identities = 68/139 (48%), Positives = 102/139 (73%), Gaps = 4/139 (2%)
 Frame = +2

Query: 2    GSWDGTIR*WSLSNHNPLAVLGEDTPLY*RSPWTVTC----LLQSHENGCVKLWKNDVLS 169
            GSWDGT+R WSLS+++ L VLGE+TP   RS  ++      L+ +++NG +++W++D L 
Sbjct: 671  GSWDGTVRLWSLSDNSLLTVLGEETPGIVRSILSLAADDQTLVAAYQNGDIQIWRDDTLM 730

Query: 170  SSIETQSGAIFALDIKEKLLFLGGWNKGVDVKEVSGDELHIDTRSIGSIACSSVITALLY 349
             S++ Q+GAI ++ +  K LF GGW+K ++V+E+SGDE+ ++   +GSI  SSVIT+LLY
Sbjct: 731  KSMKIQNGAILSIAVNGKWLFTGGWDKTINVQELSGDEISVNCAHVGSIPGSSVITSLLY 790

Query: 350  WEGKLFVGFAVRIIKVYKY 406
            WEGKLF GFA + IKVY +
Sbjct: 791  WEGKLFAGFADKTIKVYYF 809


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