BLASTX nr result

ID: Coptis24_contig00005436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005436
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18973.3| unnamed protein product [Vitis vinifera]              186   4e-45
ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248...   184   1e-44
ref|XP_002329176.1| predicted protein [Populus trichocarpa] gi|2...   169   4e-40
ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793...   167   2e-39
ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thalia...   158   1e-36

>emb|CBI18973.3| unnamed protein product [Vitis vinifera]
          Length = 734

 Score =  186 bits (471), Expect = 4e-45
 Identities = 87/136 (63%), Positives = 108/136 (79%)
 Frame = -2

Query: 655  GSWDGTIRLWSLSNHNPLAVLGEDIPGNVASVLAISVDHDMLAAAHENGCVKLWKNDVFS 476
            GSWDGTIRLWSL++H+PL VLGED PGNV SVL++  DH ML AAHE+GC+K+W+NDVF 
Sbjct: 599  GSWDGTIRLWSLNDHSPLTVLGEDTPGNVISVLSLKADHHMLLAAHEDGCLKIWRNDVFM 658

Query: 475  SSIETQSGAIFALDIKEKLLFLGGRNKTVDVKEISGDELHTDTRSIGSIACTSVITALLY 296
             SI+   GA+FA+ +  K LF GG +K+V+V+EISGD+L  +   +GSIA  S +TALLY
Sbjct: 659  KSIQAHDGAVFAVAMGGKWLFTGGWDKSVNVQEISGDDLQIEALPVGSIASDSAVTALLY 718

Query: 295  WDGKLFVGFADRIIKV 248
            W GKLFVG ADRIIKV
Sbjct: 719  WQGKLFVGCADRIIKV 734


>ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
          Length = 1817

 Score =  184 bits (467), Expect = 1e-44
 Identities = 86/135 (63%), Positives = 107/135 (79%)
 Frame = -2

Query: 655  GSWDGTIRLWSLSNHNPLAVLGEDIPGNVASVLAISVDHDMLAAAHENGCVKLWKNDVFS 476
            GSWDGTIRLWSL++H+PL VLGED PGNV SVL++  DH ML AAHE+GC+K+W+NDVF 
Sbjct: 683  GSWDGTIRLWSLNDHSPLTVLGEDTPGNVISVLSLKADHHMLLAAHEDGCLKIWRNDVFM 742

Query: 475  SSIETQSGAIFALDIKEKLLFLGGRNKTVDVKEISGDELHTDTRSIGSIACTSVITALLY 296
             SI+   GA+FA+ +  K LF GG +K+V+V+EISGD+L  +   +GSIA  S +TALLY
Sbjct: 743  KSIQAHDGAVFAVAMGGKWLFTGGWDKSVNVQEISGDDLQIEALPVGSIASDSAVTALLY 802

Query: 295  WDGKLFVGFADRIIK 251
            W GKLFVG ADRIIK
Sbjct: 803  WQGKLFVGCADRIIK 817


>ref|XP_002329176.1| predicted protein [Populus trichocarpa] gi|222870957|gb|EEF08088.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  169 bits (428), Expect = 4e-40
 Identities = 81/137 (59%), Positives = 102/137 (74%)
 Frame = -2

Query: 655 GSWDGTIRLWSLSNHNPLAVLGEDIPGNVASVLAISVDHDMLAAAHENGCVKLWKNDVFS 476
           GSWDGTIRLWSL++H+PL VLG D+PG   SVL+++ + ++L AAHENG +K W++DVF 
Sbjct: 115 GSWDGTIRLWSLTDHSPLTVLGNDLPGTATSVLSVTANQNILVAAHENGQIKAWRDDVFK 174

Query: 475 SSIETQSGAIFALDIKEKLLFLGGRNKTVDVKEISGDELHTDTRSIGSIACTSVITALLY 296
            S +  SGAI A  ++ K LF GG +K V+V+E+SGDE   DTR IGSI   SV+TALL 
Sbjct: 175 KSTQCHSGAILACVMEGKWLFTGGWDKIVNVQELSGDEFQVDTRPIGSIPGGSVVTALLC 234

Query: 295 WDGKLFVGFADRIIKVY 245
           W GKLFVG  DR IKVY
Sbjct: 235 WQGKLFVGHGDRTIKVY 251


>ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
          Length = 1815

 Score =  167 bits (422), Expect = 2e-39
 Identities = 75/135 (55%), Positives = 104/135 (77%)
 Frame = -2

Query: 655  GSWDGTIRLWSLSNHNPLAVLGEDIPGNVASVLAISVDHDMLAAAHENGCVKLWKNDVFS 476
            GSWDGT+RLWSL++H+PL VLGED P  + S+LAI+VD  +L AAHENGC+K+W+NDVF 
Sbjct: 685  GSWDGTVRLWSLNDHSPLTVLGEDPPAEMKSILAITVDRHLLVAAHENGCIKVWRNDVFM 744

Query: 475  SSIETQSGAIFALDIKEKLLFLGGRNKTVDVKEISGDELHTDTRSIGSIACTSVITALLY 296
            +S     GAIFA+ ++ K L+ GG +K V+++E+SGDE   D ++ GSI C++V TA+L 
Sbjct: 745  NSKTLHKGAIFAMSMQGKCLYTGGWDKNVNIQELSGDEFELDVKAYGSIPCSAVATAILC 804

Query: 295  WDGKLFVGFADRIIK 251
              GKL+VG+AD+ IK
Sbjct: 805  SQGKLYVGYADKSIK 819


>ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thaliana]
            gi|17529236|gb|AAL38845.1| putative SecA-type chloroplast
            protein transport factor [Arabidopsis thaliana]
            gi|20465933|gb|AAM20152.1| putative SecA-type chloroplast
            transport factor protein [Arabidopsis thaliana]
            gi|110739333|dbj|BAF01579.1| hypothetical protein
            [Arabidopsis thaliana] gi|332192014|gb|AEE30135.1| zinc
            ion binding protein [Arabidopsis thaliana]
          Length = 811

 Score =  158 bits (399), Expect = 1e-36
 Identities = 71/139 (51%), Positives = 106/139 (76%)
 Frame = -2

Query: 655  GSWDGTIRLWSLSNHNPLAVLGEDIPGNVASVLAISVDHDMLAAAHENGCVKLWKNDVFS 476
            GSWDGT+RLWSLS+++ L VLGE+ PG V S+L+++ D   L AA++NG +++W++D   
Sbjct: 671  GSWDGTVRLWSLSDNSLLTVLGEETPGIVRSILSLAADDQTLVAAYQNGDIQIWRDDTLM 730

Query: 475  SSIETQSGAIFALDIKEKLLFLGGRNKTVDVKEISGDELHTDTRSIGSIACTSVITALLY 296
             S++ Q+GAI ++ +  K LF GG +KT++V+E+SGDE+  +   +GSI  +SVIT+LLY
Sbjct: 731  KSMKIQNGAILSIAVNGKWLFTGGWDKTINVQELSGDEISVNCAHVGSIPGSSVITSLLY 790

Query: 295  WDGKLFVGFADRIIKVYKY 239
            W+GKLF GFAD+ IKVY +
Sbjct: 791  WEGKLFAGFADKTIKVYYF 809


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