BLASTX nr result

ID: Coptis24_contig00005431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005431
         (3444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida]     173   1e-57
gb|AFA43815.1| ABCG/PDR subfamily ABC transporter [Petunia axill...   173   1e-57
emb|CAN80954.1| hypothetical protein VITISV_032205 [Vitis vinifera]   164   1e-55
emb|CBI20978.3| unnamed protein product [Vitis vinifera]              164   1e-55
sp|Q949G3.1|PDR1_NICPL RecName: Full=Pleiotropic drug resistance...   164   1e-54

>gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida]
          Length = 1452

 Score =  173 bits (439), Expect(2) = 1e-57
 Identities = 95/175 (54%), Positives = 116/175 (66%)
 Frame = -1

Query: 3144 IVNTDT*ERKNLIERLVRVAEDDNEKFLLKLKERMDRVGIENPTIEVRFEHLSVSAEAYI 2965
            I   D  ER+NL+ERL+++ ++DNEKFLLKLKER+DRVG++ PTIEVRFEHLSV AEA +
Sbjct: 73   ITKLDLVERRNLLERLIKITDEDNEKFLLKLKERIDRVGLDLPTIEVRFEHLSVDAEARV 132

Query: 2964 GSRALPTVINVPVNMAERFLNTVQKLVDTS*R*WNYQTKQXXXXXXXXXXXXXXXXXXXX 2785
            GSRALPTV N  VN+ E FLN +  L +          KQ                    
Sbjct: 133  GSRALPTVFNFTVNILEDFLNYLHILPN---------RKQPLPILHDVSGIIKPGRMTLL 183

Query: 2784 XXXXGSGKTSLLLALAGKLDPKLEVSGNITYNGHEMNEFVQSRASANISQHDLHM 2620
                 SGKT+LLLALAGKLD  L+VSG +TYNGH+MNEFV  R+SA ISQ+DLH+
Sbjct: 184  LGPPSSGKTTLLLALAGKLDKDLKVSGRVTYNGHDMNEFVAQRSSAYISQYDLHI 238



 Score = 79.7 bits (195), Expect(2) = 1e-57
 Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = -3

Query: 3340 QLFRYDFCR-NASGIWRNTNDDVFTRSSRDEDDKEALKWAAIEILPTYSRIRKSILSGPD 3164
            +LFR    R ++S +WRN+  DVF+RSSR+ DD+EALKWAA+E LPTY RIR+ IL+  +
Sbjct: 6    ELFRVSSARLSSSNVWRNSAMDVFSRSSREADDEEALKWAALEKLPTYLRIRRGILTEEE 65

Query: 3163 GKHREVD 3143
            G+ REVD
Sbjct: 66   GQSREVD 72


>gb|AFA43815.1| ABCG/PDR subfamily ABC transporter [Petunia axillaris]
          Length = 1452

 Score =  173 bits (439), Expect(2) = 1e-57
 Identities = 95/175 (54%), Positives = 116/175 (66%)
 Frame = -1

Query: 3144 IVNTDT*ERKNLIERLVRVAEDDNEKFLLKLKERMDRVGIENPTIEVRFEHLSVSAEAYI 2965
            I   D  ER+NL+ERL+++ ++DNEKFLLKLKER+DRVG++ PTIEVRFEHLSV AEA +
Sbjct: 73   ITKLDLVERRNLLERLIKITDEDNEKFLLKLKERIDRVGLDLPTIEVRFEHLSVDAEARV 132

Query: 2964 GSRALPTVINVPVNMAERFLNTVQKLVDTS*R*WNYQTKQXXXXXXXXXXXXXXXXXXXX 2785
            GSRALPTV N  VN+ E FLN +  L +          KQ                    
Sbjct: 133  GSRALPTVFNFTVNILEDFLNYLHILPN---------RKQPLPILHDVSGIIKPGRMTLL 183

Query: 2784 XXXXGSGKTSLLLALAGKLDPKLEVSGNITYNGHEMNEFVQSRASANISQHDLHM 2620
                 SGKT+LLLALAGKLD  L+VSG +TYNGH+MNEFV  R+SA ISQ+DLH+
Sbjct: 184  LGPPSSGKTTLLLALAGKLDKDLKVSGRVTYNGHDMNEFVAQRSSAYISQYDLHI 238



 Score = 79.7 bits (195), Expect(2) = 1e-57
 Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = -3

Query: 3340 QLFRYDFCR-NASGIWRNTNDDVFTRSSRDEDDKEALKWAAIEILPTYSRIRKSILSGPD 3164
            +LFR    R ++S +WRN+  DVF+RSSR+ DD+EALKWAA+E LPTY RIR+ IL+  +
Sbjct: 6    ELFRVSSARLSSSNVWRNSAMDVFSRSSREADDEEALKWAALEKLPTYLRIRRGILTEEE 65

Query: 3163 GKHREVD 3143
            G+ REVD
Sbjct: 66   GQSREVD 72


>emb|CAN80954.1| hypothetical protein VITISV_032205 [Vitis vinifera]
          Length = 1441

 Score =  164 bits (415), Expect(2) = 1e-55
 Identities = 89/168 (52%), Positives = 111/168 (66%)
 Frame = -1

Query: 3123 ERKNLIERLVRVAEDDNEKFLLKLKERMDRVGIENPTIEVRFEHLSVSAEAYIGSRALPT 2944
            E+KNL+ERLV++AE+DNEKFLLKLKER+DRVG++ PTIEVRFEH++V AEAYIG RALPT
Sbjct: 79   EKKNLLERLVKIAEEDNEKFLLKLKERIDRVGLDIPTIEVRFEHITVDAEAYIGGRALPT 138

Query: 2943 VINVPVNMAERFLNTVQKLVDTS*R*WNYQTKQXXXXXXXXXXXXXXXXXXXXXXXXGSG 2764
            +IN   NM E FLN +  L            K+                         SG
Sbjct: 139  IINFSANMLEGFLNYLHILP---------SRKKPLPILHDVSGIIKPGRMTLLLGPPSSG 189

Query: 2763 KTSLLLALAGKLDPKLEVSGNITYNGHEMNEFVQSRASANISQHDLHM 2620
            KT+LLL LAGKL   L++SG ++YNGH M+EFV  R+SA ISQ+DLH+
Sbjct: 190  KTTLLLTLAGKLGSDLKLSGRVSYNGHGMDEFVPQRSSAYISQYDLHI 237



 Score = 82.0 bits (201), Expect(2) = 1e-55
 Identities = 38/57 (66%), Positives = 48/57 (84%)
 Frame = -3

Query: 3313 NASGIWRNTNDDVFTRSSRDEDDKEALKWAAIEILPTYSRIRKSILSGPDGKHREVD 3143
            ++S IWRN+  +VF+RSSRDEDD+EALKWAAIE LPTY RIR+ IL+  +GK RE+D
Sbjct: 15   SSSNIWRNSGMEVFSRSSRDEDDEEALKWAAIEKLPTYLRIRRGILAEEEGKAREID 71


>emb|CBI20978.3| unnamed protein product [Vitis vinifera]
          Length = 1436

 Score =  164 bits (415), Expect(2) = 1e-55
 Identities = 89/168 (52%), Positives = 111/168 (66%)
 Frame = -1

Query: 3123 ERKNLIERLVRVAEDDNEKFLLKLKERMDRVGIENPTIEVRFEHLSVSAEAYIGSRALPT 2944
            E+KNL+ERLV++AE+DNEKFLLKLKER+DRVG++ PTIEVRFEH++V AEAYIG RALPT
Sbjct: 79   EKKNLLERLVKIAEEDNEKFLLKLKERIDRVGLDIPTIEVRFEHITVDAEAYIGGRALPT 138

Query: 2943 VINVPVNMAERFLNTVQKLVDTS*R*WNYQTKQXXXXXXXXXXXXXXXXXXXXXXXXGSG 2764
            +IN   NM E FLN +  L            K+                         SG
Sbjct: 139  IINFSANMLEGFLNYLHILP---------SRKKPLPILHDVSGIIKPGRMTLLLGPPSSG 189

Query: 2763 KTSLLLALAGKLDPKLEVSGNITYNGHEMNEFVQSRASANISQHDLHM 2620
            KT+LLL LAGKL   L++SG ++YNGH M+EFV  R+SA ISQ+DLH+
Sbjct: 190  KTTLLLTLAGKLGSDLKLSGRVSYNGHGMDEFVPQRSSAYISQYDLHI 237



 Score = 82.0 bits (201), Expect(2) = 1e-55
 Identities = 38/57 (66%), Positives = 48/57 (84%)
 Frame = -3

Query: 3313 NASGIWRNTNDDVFTRSSRDEDDKEALKWAAIEILPTYSRIRKSILSGPDGKHREVD 3143
            ++S IWRN+  +VF+RSSRDEDD+EALKWAAIE LPTY RIR+ IL+  +GK RE+D
Sbjct: 15   SSSNIWRNSGMEVFSRSSRDEDDEEALKWAAIEKLPTYLRIRRGILAEEEGKAREID 71


>sp|Q949G3.1|PDR1_NICPL RecName: Full=Pleiotropic drug resistance protein 1; AltName:
            Full=NpPDR1 gi|14331118|emb|CAC40990.1| ABC1 protein
            [Nicotiana plumbaginifolia]
          Length = 1436

 Score =  164 bits (414), Expect(2) = 1e-54
 Identities = 88/168 (52%), Positives = 111/168 (66%)
 Frame = -1

Query: 3123 ERKNLIERLVRVAEDDNEKFLLKLKERMDRVGIENPTIEVRFEHLSVSAEAYIGSRALPT 2944
            ERKNL+ERLV+VA++DNEKFLLKLK R+DRVGI+ P+IEVRFEHL++ A+AY+GSRALPT
Sbjct: 93   ERKNLLERLVKVADEDNEKFLLKLKNRIDRVGIDFPSIEVRFEHLNIDADAYVGSRALPT 152

Query: 2943 VINVPVNMAERFLNTVQKLVDTS*R*WNYQTKQXXXXXXXXXXXXXXXXXXXXXXXXGSG 2764
              N   N  E  L+++  L            K+                        GSG
Sbjct: 153  FTNFISNFVEGLLDSIHILP---------SKKRQVTILKDVSGIVKPCRMTLLLGPPGSG 203

Query: 2763 KTSLLLALAGKLDPKLEVSGNITYNGHEMNEFVQSRASANISQHDLHM 2620
            KT+LLLALAGKLD  L+V+G +TYNGHE++EFV  R +A ISQHDLH+
Sbjct: 204  KTTLLLALAGKLDSALKVTGKVTYNGHELHEFVPQRTAAYISQHDLHI 251



 Score = 79.0 bits (193), Expect(2) = 1e-54
 Identities = 36/57 (63%), Positives = 44/57 (77%)
 Frame = -3

Query: 3313 NASGIWRNTNDDVFTRSSRDEDDKEALKWAAIEILPTYSRIRKSILSGPDGKHREVD 3143
            N++ IWRN   +VF+RS+RDEDD+EALKWAA+E LPTY R+RK IL G  G   EVD
Sbjct: 29   NSNSIWRNNGAEVFSRSARDEDDEEALKWAALEKLPTYDRLRKGILFGSQGAAAEVD 85


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