BLASTX nr result

ID: Coptis24_contig00005419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005419
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...   260   7e-68
emb|CBI26749.3| unnamed protein product [Vitis vinifera]              260   7e-68
emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]   260   7e-68
ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...   260   9e-68
emb|CBI39697.3| unnamed protein product [Vitis vinifera]              260   9e-68

>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score =  260 bits (665), Expect = 7e-68
 Identities = 125/149 (83%), Positives = 135/149 (90%)
 Frame = +2

Query: 2    IEAHKPDNYWPSHGEIDFRDLQVRYAPRMPLVLRGLTCTIPGGMKTGIVGRTGSGKSTMI 181
            +E +KP   WPSHGE+D RDLQVRYAP +PLVLRGLTC  PGGMKTGIVGRTGSGKST+I
Sbjct: 1227 MEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSGKSTLI 1286

Query: 182  QTLFRIVEPASGRILIDGHNISTIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEHTDE 361
            QTLFRIVEP +G I+IDG NIS IGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEE++DE
Sbjct: 1287 QTLFRIVEPTAGEIMIDGTNISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYSDE 1346

Query: 362  QIWEALDKCQLGNEVRKKEGKLDSTVTEN 448
            QIWEALDKCQLG+EVRKKEGKLDS V EN
Sbjct: 1347 QIWEALDKCQLGDEVRKKEGKLDSAVNEN 1375


>emb|CBI26749.3| unnamed protein product [Vitis vinifera]
          Length = 1269

 Score =  260 bits (665), Expect = 7e-68
 Identities = 125/149 (83%), Positives = 135/149 (90%)
 Frame = +2

Query: 2    IEAHKPDNYWPSHGEIDFRDLQVRYAPRMPLVLRGLTCTIPGGMKTGIVGRTGSGKSTMI 181
            +E +KP   WPSHGE+D RDLQVRYAP +PLVLRGLTC  PGGMKTGIVGRTGSGKST+I
Sbjct: 1011 MEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSGKSTLI 1070

Query: 182  QTLFRIVEPASGRILIDGHNISTIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEHTDE 361
            QTLFRIVEP +G I+IDG NIS IGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEE++DE
Sbjct: 1071 QTLFRIVEPTAGEIMIDGTNISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYSDE 1130

Query: 362  QIWEALDKCQLGNEVRKKEGKLDSTVTEN 448
            QIWEALDKCQLG+EVRKKEGKLDS V EN
Sbjct: 1131 QIWEALDKCQLGDEVRKKEGKLDSAVNEN 1159


>emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]
          Length = 1458

 Score =  260 bits (665), Expect = 7e-68
 Identities = 125/149 (83%), Positives = 135/149 (90%)
 Frame = +2

Query: 2    IEAHKPDNYWPSHGEIDFRDLQVRYAPRMPLVLRGLTCTIPGGMKTGIVGRTGSGKSTMI 181
            +E +KP   WPSHGE+D RDLQVRYAP +PLVLRGLTC  PGGMKTGIVGRTGSGKST+I
Sbjct: 1200 MEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSGKSTLI 1259

Query: 182  QTLFRIVEPASGRILIDGHNISTIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEHTDE 361
            QTLFRIVEP +G I+IDG NIS IGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEE++DE
Sbjct: 1260 QTLFRIVEPTAGEIMIDGTNISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYSDE 1319

Query: 362  QIWEALDKCQLGNEVRKKEGKLDSTVTEN 448
            QIWEALDKCQLG+EVRKKEGKLDS V EN
Sbjct: 1320 QIWEALDKCQLGDEVRKKEGKLDSAVNEN 1348


>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  260 bits (664), Expect = 9e-68
 Identities = 126/149 (84%), Positives = 138/149 (92%)
 Frame = +2

Query: 2    IEAHKPDNYWPSHGEIDFRDLQVRYAPRMPLVLRGLTCTIPGGMKTGIVGRTGSGKSTMI 181
            IE ++P   WPSHG++D +DLQVRYAP MPLVLRGLTCT  GGMKTGIVGRTGSGKST+I
Sbjct: 1223 IEENRPACSWPSHGQVDIQDLQVRYAPHMPLVLRGLTCTFLGGMKTGIVGRTGSGKSTLI 1282

Query: 182  QTLFRIVEPASGRILIDGHNISTIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEHTDE 361
            QTLFRIVEPA+G+I IDG NIS+IGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEE++DE
Sbjct: 1283 QTLFRIVEPAAGQITIDGTNISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYSDE 1342

Query: 362  QIWEALDKCQLGNEVRKKEGKLDSTVTEN 448
            QIWEALDKCQLG+EVRKKEGKLDS VTEN
Sbjct: 1343 QIWEALDKCQLGDEVRKKEGKLDSAVTEN 1371


>emb|CBI39697.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score =  260 bits (664), Expect = 9e-68
 Identities = 126/149 (84%), Positives = 138/149 (92%)
 Frame = +2

Query: 2    IEAHKPDNYWPSHGEIDFRDLQVRYAPRMPLVLRGLTCTIPGGMKTGIVGRTGSGKSTMI 181
            IE ++P   WPSHG++D +DLQVRYAP MPLVLRGLTCT  GGMKTGIVGRTGSGKST+I
Sbjct: 1019 IEENRPACSWPSHGQVDIQDLQVRYAPHMPLVLRGLTCTFLGGMKTGIVGRTGSGKSTLI 1078

Query: 182  QTLFRIVEPASGRILIDGHNISTIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEHTDE 361
            QTLFRIVEPA+G+I IDG NIS+IGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEE++DE
Sbjct: 1079 QTLFRIVEPAAGQITIDGTNISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYSDE 1138

Query: 362  QIWEALDKCQLGNEVRKKEGKLDSTVTEN 448
            QIWEALDKCQLG+EVRKKEGKLDS VTEN
Sbjct: 1139 QIWEALDKCQLGDEVRKKEGKLDSAVTEN 1167


Top