BLASTX nr result

ID: Coptis24_contig00005416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005416
         (1205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145620.1| PREDICTED: uncharacterized protein LOC101222...   298   2e-78
ref|XP_002301758.1| predicted protein [Populus trichocarpa] gi|1...   293   5e-77
ref|XP_002277996.1| PREDICTED: uncharacterized protein LOC100249...   291   2e-76
emb|CAN62080.1| hypothetical protein VITISV_024069 [Vitis vinifera]   291   2e-76
ref|XP_002512801.1| conserved hypothetical protein [Ricinus comm...   277   3e-72

>ref|XP_004145620.1| PREDICTED: uncharacterized protein LOC101222896 [Cucumis sativus]
            gi|449520014|ref|XP_004167029.1| PREDICTED:
            uncharacterized LOC101222896 [Cucumis sativus]
          Length = 316

 Score =  298 bits (762), Expect = 2e-78
 Identities = 168/318 (52%), Positives = 194/318 (61%), Gaps = 18/318 (5%)
 Frame = +3

Query: 102  MAAVISHIFSSSAILTLGLYHLISTTRNHLKSPTSYSAKPYHPFNLLPSSPRXXXXXXXX 281
            MAA+I H+FSSSA+L+LGLYH++S T N LKSP SYS++PYHPF   PSS          
Sbjct: 1    MAAMIIHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSSRPYHPFP--PSSSHQLHHPHHQ 58

Query: 282  XXXXXXX--------------AFAHQTFISFESDPLLKGSTPVHKFTSYQSAAXXXXXXX 419
                                 AFAHQ  ++ + DPLLKGSTPVH F S QSAA       
Sbjct: 59   HHHHYGLRYLQLYLSIPCLIIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLI 118

Query: 420  XXXXXXXXXXXXXXPLPNDLFFTFASAVFYLEYXXXXXXXXXQTSDLQAKCDHVSAKVXX 599
                          PLP+DLFF  ASA+F+L+Y         QTSDLQAKCD VS K+  
Sbjct: 119  LTLAILLSDSTSLLPLPSDLFFALASALFFLQYSVSSSAASVQTSDLQAKCDSVSGKISA 178

Query: 600  XXXXXXXXXXXNPKNFVADVGLGASLCLQGLWVLQTGLSLYVEAFIPEGCHRMLDVVKGV 779
                        P+ FVADVGLGA+  LQGLWVLQTGLSLYVEAFIPEGCHR+LDVV GV
Sbjct: 179  LASFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGV 238

Query: 780  EGSTKCDLEDSRLRAVAILDLXXXXXXXXXXXXXXATYAFVAKSVGIKRVGSYEALSSC- 956
            EGSTKCDLE+SRLRAVAILDL                YA +AK+VG++RVGSYEAL +  
Sbjct: 239  EGSTKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAA 298

Query: 957  ---EPNHFQMKALEGTQA 1001
               + NH QMKAL GTQA
Sbjct: 299  IGGDNNHIQMKALTGTQA 316


>ref|XP_002301758.1| predicted protein [Populus trichocarpa] gi|118481608|gb|ABK92746.1|
            unknown [Populus trichocarpa] gi|222843484|gb|EEE81031.1|
            predicted protein [Populus trichocarpa]
          Length = 306

 Score =  293 bits (751), Expect = 5e-77
 Identities = 163/305 (53%), Positives = 193/305 (63%), Gaps = 8/305 (2%)
 Frame = +3

Query: 111  VISHIFSSSAILTLGLYHLISTTRNHLKSPTSYSAKPYHPFNLLPSSPRXXXXXXXXXXX 290
            V  +IFSS+A++TL LYHLISTT  +LKSP +Y AKPY+PF+   SS R           
Sbjct: 5    VFYYIFSSAALITLALYHLISTTTAYLKSPHAYIAKPYYPFS---SSHRFKYLQLYLLIL 61

Query: 291  XXXXAFAHQTFISFESDPLLKGSTPVHKFTSYQSAAXXXXXXXXXXXXXXXXXXXXXPLP 470
                AFAHQT +S +SDPLLKGSTPVH+FTS QSAA                     PLP
Sbjct: 62   CLLVAFAHQTLVSSDSDPLLKGSTPVHRFTSLQSAAVLFLFLILSLSLLISDSTSLLPLP 121

Query: 471  NDLFFTFASAVFYLEYXXXXXXXXXQTSDLQAKCDHVSAKVXXXXXXXXXXXXXNPKNFV 650
            +DLFF  ASAVF+L+          QTSDLQAKCD VSA++              P+ FV
Sbjct: 122  SDLFFALASAVFFLQSSSSASSASVQTSDLQAKCDSVSAQISALAALLCLILACQPRMFV 181

Query: 651  ADVGLGASLCLQGLWVLQTGLSLYVEAFIPEGCHRMLDVVKGVEGSTKCDLEDSRLRAVA 830
            ADVGLG ++CLQGLW+LQTGLSLYV+AFIP+GCH++LDVV GVEGSTKC+LEDSRLRAVA
Sbjct: 182  ADVGLGGAVCLQGLWMLQTGLSLYVDAFIPDGCHKLLDVVSGVEGSTKCELEDSRLRAVA 241

Query: 831  ILDLXXXXXXXXXXXXXXATYAFVAKSVGIKRV-GSYEAL-------SSCEPNHFQMKAL 986
            ILDL               TY  +AKS G++R+ GSYEAL       +    NH QMKAL
Sbjct: 242  ILDLVFVVHVMFVVLIVMVTYGVIAKSYGVRRLGGSYEALPTAASSVADSSSNHIQMKAL 301

Query: 987  EGTQA 1001
             GTQA
Sbjct: 302  TGTQA 306


>ref|XP_002277996.1| PREDICTED: uncharacterized protein LOC100249764 [Vitis vinifera]
          Length = 306

 Score =  291 bits (746), Expect = 2e-76
 Identities = 162/304 (53%), Positives = 192/304 (63%), Gaps = 5/304 (1%)
 Frame = +3

Query: 105  AAVISHIFSSSAILTLGLYHLISTTRNHLKSPT-SYSAKPYHPFNLLPSSP-RXXXXXXX 278
            +A+I  IFSS++++TLGLYHL+   + HL  P   YSAK YHPF+  PSS  R       
Sbjct: 3    SALIYEIFSSASLITLGLYHLVCAIKTHLHHPARDYSAKLYHPFSSSPSSSHRLRHLQLY 62

Query: 279  XXXXXXXXAFAHQTFISFESDPLLKGSTPVHKFTSYQSAAXXXXXXXXXXXXXXXXXXXX 458
                    AF HQT +S ++DPLLKG TPVH+F+S QSAA                    
Sbjct: 63   VIILFLLIAFVHQTLVSSDADPLLKGRTPVHRFSSLQSAAVLFLFLILALAILLSETTSL 122

Query: 459  XPLPNDLFFTFASAVFYLEYXXXXXXXXXQTSDLQAKCDHVSAKVXXXXXXXXXXXXXNP 638
             PLP+DLFF  ASA+FYL++         QTSDLQAKCD VSA+V              P
Sbjct: 123  LPLPSDLFFALASALFYLQFTVSSSAASVQTSDLQAKCDSVSARVSALSSLLCIILACLP 182

Query: 639  KNFVADVGLGASLCLQGLWVLQTGLSLYVEAFIPEGCHRMLDVVKGVEGSTKCDLEDSRL 818
            + FVAD+ LGAS+ LQGLW LQTGL+LYVEAFIPEGCH++LDVV GVEGSTKCDLE+SRL
Sbjct: 183  RLFVADLALGASVILQGLWTLQTGLALYVEAFIPEGCHKLLDVVSGVEGSTKCDLEESRL 242

Query: 819  RAVAILDLXXXXXXXXXXXXXXATYAFVAKSVGIKRVGSYEA---LSSCEPNHFQMKALE 989
            RAVAILDL              ATYA +AK+VGI+R GSYEA   LSS + NH QMK L 
Sbjct: 243  RAVAILDLVFVVYVMFVVFILMATYAVLAKTVGIRRTGSYEALPTLSSADSNHIQMKTLA 302

Query: 990  GTQA 1001
            GTQA
Sbjct: 303  GTQA 306


>emb|CAN62080.1| hypothetical protein VITISV_024069 [Vitis vinifera]
          Length = 357

 Score =  291 bits (746), Expect = 2e-76
 Identities = 162/304 (53%), Positives = 192/304 (63%), Gaps = 5/304 (1%)
 Frame = +3

Query: 105  AAVISHIFSSSAILTLGLYHLISTTRNHLKSPT-SYSAKPYHPFNLLPSSP-RXXXXXXX 278
            +A+I  IFSS++++TLGLYHL+   + HL  P   YSAK YHPF+  PSS  R       
Sbjct: 54   SALIYEIFSSASLITLGLYHLVCAIKTHLHHPARDYSAKLYHPFSSSPSSSHRLRHLQLY 113

Query: 279  XXXXXXXXAFAHQTFISFESDPLLKGSTPVHKFTSYQSAAXXXXXXXXXXXXXXXXXXXX 458
                    AF HQT +S ++DPLLKG TPVH+F+S QSAA                    
Sbjct: 114  VIILFLLIAFVHQTLVSSDADPLLKGRTPVHRFSSLQSAAVLFLFLILALAILLSETTSL 173

Query: 459  XPLPNDLFFTFASAVFYLEYXXXXXXXXXQTSDLQAKCDHVSAKVXXXXXXXXXXXXXNP 638
             PLP+DLFF  ASA+FYL++         QTSDLQAKCD VSA+V              P
Sbjct: 174  LPLPSDLFFALASALFYLQFTVSSSAASVQTSDLQAKCDSVSARVSALSSLLCIILACLP 233

Query: 639  KNFVADVGLGASLCLQGLWVLQTGLSLYVEAFIPEGCHRMLDVVKGVEGSTKCDLEDSRL 818
            + FVAD+ LGAS+ LQGLW LQTGL+LYVEAFIPEGCH++LDVV GVEGSTKCDLE+SRL
Sbjct: 234  RLFVADLALGASVILQGLWTLQTGLALYVEAFIPEGCHKLLDVVSGVEGSTKCDLEESRL 293

Query: 819  RAVAILDLXXXXXXXXXXXXXXATYAFVAKSVGIKRVGSYEA---LSSCEPNHFQMKALE 989
            RAVAILDL              ATYA +AK+VGI+R GSYEA   LSS + NH QMK L 
Sbjct: 294  RAVAILDLVFVVYVMFVVFILMATYAVLAKTVGIRRTGSYEALPTLSSADSNHIQMKTLA 353

Query: 990  GTQA 1001
            GTQA
Sbjct: 354  GTQA 357


>ref|XP_002512801.1| conserved hypothetical protein [Ricinus communis]
            gi|223547812|gb|EEF49304.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 305

 Score =  277 bits (709), Expect = 3e-72
 Identities = 151/306 (49%), Positives = 185/306 (60%), Gaps = 6/306 (1%)
 Frame = +3

Query: 102  MAAVISHIFSSSAILTLGLYHLISTTRNHLKSPTSYSAKPYHPFNLLPSSPRXXXXXXXX 281
            M ++   +FSS+++++LGLY LI  TRN+LKSP SY AKPYHP     SS R        
Sbjct: 1    MTSLTYQLFSSTSLISLGLYRLIFATRNYLKSPQSYIAKPYHPLPF-SSSSRFKHLQLYL 59

Query: 282  XXXXXXXAFAHQTFISFESDPLLKGSTPVHKFTSYQSAAXXXXXXXXXXXXXXXXXXXXX 461
                   +F HQT IS +SDPLLKG TPVH+FTS QSA+                     
Sbjct: 60   LILCLLISFTHQTIISSDSDPLLKGRTPVHRFTSLQSASLIFLFLILSLALLLSETTSLL 119

Query: 462  PLPNDLFFTFASAVFYLEYXXXXXXXXXQTSDLQAKCDHVSAKVXXXXXXXXXXXXXNPK 641
            PLP DLFF   SA+ +L+Y         QTSD++AKCD + A++              P+
Sbjct: 120  PLPPDLFFALGSALLFLQYSVASSASAVQTSDIEAKCDTIFARISFVLGFLCLILAFKPR 179

Query: 642  NFVADVGLGASLCLQGLWVLQTGLSLYVEAFIPEGCHRMLDVVKGVEGSTKCDLEDSRLR 821
             F+ADVGLG + CL GLW LQTGLSLYVE FIPEGCHR+LDVV G+EGSTKCDLE+S+LR
Sbjct: 180  VFIADVGLGGAFCLLGLWALQTGLSLYVEGFIPEGCHRLLDVVNGIEGSTKCDLEESKLR 239

Query: 822  AVAILDLXXXXXXXXXXXXXXATYAFVAKSV-GIKRVGSYEAL-----SSCEPNHFQMKA 983
            AVAILDL                Y  VAKSV G++R+GSYEAL     ++ + NH QMKA
Sbjct: 240  AVAILDLMFVIHVMFVIVIVMVIYGVVAKSVGGVRRLGSYEALPTTTSTAADSNHIQMKA 299

Query: 984  LEGTQA 1001
            L GTQA
Sbjct: 300  LTGTQA 305


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