BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005408
         (1238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   356   6e-96
ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|2...   334   3e-89
ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein ...   333   7e-89
ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   332   9e-89
gb|AFK38781.1| unknown [Lotus japonicus]                              324   2e-86

>ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Vitis vinifera]
          Length = 256

 Score =  356 bits (914), Expect = 6e-96
 Identities = 176/250 (70%), Positives = 201/250 (80%)
 Frame = +3

Query: 6   MEKNGDILMIEAAPPKTSLSGIAREEIIDALPYIDDDYGDPKVKAEVDKLVEEEMRRSTK 185
           M  +GDILM+EA PP+ S       E IDALPYIDDDYG PKVK EVD+LVE+EMRRS+K
Sbjct: 1   MANDGDILMLEA-PPQASRPA----EFIDALPYIDDDYGHPKVKEEVDRLVEDEMRRSSK 55

Query: 186 KPSDFLKNFPVAAKSNFENHPMLAREYERVRAGKPPATMDTSRYTLQPPSENKRSDSNAW 365
           KPSDFLK+ P      F NHPMLAREYERVRAGKPP  +D SRY L+ P  NKR+D  AW
Sbjct: 56  KPSDFLKDLPPLPPFGFHNHPMLAREYERVRAGKPPVALDMSRYGLEMPPMNKRNDETAW 115

Query: 366 KQHLETAQSSLQHQVIRLENLDLMSKHGGDIWKHHNQRLEAFLSRMQAIALGYNERIEVV 545
           K  L+ AQ  LQHQVIRLENL+LMSKHG D+WK HNQRLEA+LSRMQA+A+  NE+IE V
Sbjct: 116 KHALQKAQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEAYLSRMQALAMEQNEKIETV 175

Query: 546 NRERKYHQQKTAVELNALSTQWKELCEKNIDIQAACANIENHIEDLRREAADRGWNLEAN 725
           NRERKYHQQ TA ELNALS QWKELCEKNI+I+ ACA IEN+IE+LRREAA+RGWNL+AN
Sbjct: 176 NRERKYHQQNTAFELNALSAQWKELCEKNIEIRTACAKIENNIEELRREAAERGWNLDAN 235

Query: 726 MENGPSLHSE 755
           ++NG   HSE
Sbjct: 236 IDNGSLSHSE 245


>ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|222869079|gb|EEF06210.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  334 bits (856), Expect = 3e-89
 Identities = 165/248 (66%), Positives = 198/248 (79%), Gaps = 2/248 (0%)
 Frame = +3

Query: 15  NGDILMIEAAPPKTS-LSGIAREEIIDALPYIDDDYGDPKVKAEVDKLVEEEMRRSTKKP 191
           NGD+LM+EAAP  +   S  +  EIIDALPYIDDDYG+P VKAEVD+LVEEEMRRS+KKP
Sbjct: 8   NGDMLMLEAAPEASRPWSTSSNAEIIDALPYIDDDYGNPSVKAEVDRLVEEEMRRSSKKP 67

Query: 192 SDFLKNFPVAAKSNFENHPMLAREYERVRAGKPPATMDTSRYT-LQPPSENKRSDSNAWK 368
           SDFLK  P   K  FEN+PMLA+EYERVRAG+PP T+D SRY+ L  P+ NK +D  AWK
Sbjct: 68  SDFLKELPPVPKFTFENYPMLAKEYERVRAGRPPVTLDFSRYSHLDLPAANKMNDETAWK 127

Query: 369 QHLETAQSSLQHQVIRLENLDLMSKHGGDIWKHHNQRLEAFLSRMQAIALGYNERIEVVN 548
           Q L+ AQ  LQHQVIRLENL+LMSK+G ++W  HN++LE  L+R Q +A   NE+IE VN
Sbjct: 128 QALQRAQRLLQHQVIRLENLELMSKYGPEVWIQHNRQLETMLTRTQKLAREQNEKIEAVN 187

Query: 549 RERKYHQQKTAVELNALSTQWKELCEKNIDIQAACANIENHIEDLRREAADRGWNLEANM 728
           RERKYHQQ TA ELNALS QWKELC+KNI+IQ AC  IEN IE+L+RE+++RGWN+EAN+
Sbjct: 188 RERKYHQQNTAYELNALSAQWKELCQKNIEIQEACIKIENQIEELKRESSERGWNVEANI 247

Query: 729 ENGPSLHS 752
           ENG  LHS
Sbjct: 248 ENGSLLHS 255


>ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein [Medicago truncatula]
           gi|355525088|gb|AET05542.1| Pre-mRNA-splicing factor
           SPF27-like protein [Medicago truncatula]
           gi|388502546|gb|AFK39339.1| unknown [Medicago
           truncatula]
          Length = 261

 Score =  333 bits (853), Expect = 7e-89
 Identities = 159/248 (64%), Positives = 194/248 (78%)
 Frame = +3

Query: 15  NGDILMIEAAPPKTSLSGIAREEIIDALPYIDDDYGDPKVKAEVDKLVEEEMRRSTKKPS 194
           NGD+LM+EA PP    S  +  EIIDALPYIDDDY DP+VK EVD+LVEEEMRRS+KKP+
Sbjct: 15  NGDVLMLEA-PPSYGRSSHSDAEIIDALPYIDDDYSDPRVKIEVDRLVEEEMRRSSKKPA 73

Query: 195 DFLKNFPVAAKSNFENHPMLAREYERVRAGKPPATMDTSRYTLQPPSENKRSDSNAWKQH 374
           DFLK+FP    SNF ++PM+ REYERVRAG+PP ++D SRY L+ P  NKR+D  AWK  
Sbjct: 74  DFLKDFPPLPSSNFHDYPMIGREYERVRAGRPPVSLDRSRYELEAPPVNKRNDETAWKLA 133

Query: 375 LETAQSSLQHQVIRLENLDLMSKHGGDIWKHHNQRLEAFLSRMQAIALGYNERIEVVNRE 554
           ++ AQ  LQ+Q IR+ENLDL+ KHG D WK HNQRLE +LSRMQ +A   N++IE VNRE
Sbjct: 134 IQRAQRLLQYQTIRMENLDLLFKHGPDAWKQHNQRLEVYLSRMQKLAQEQNDKIEKVNRE 193

Query: 555 RKYHQQKTAVELNALSTQWKELCEKNIDIQAACANIENHIEDLRREAADRGWNLEANMEN 734
           RKYHQQ TA ELNALS QW ELC+KNIDI+  CA++E H+ +LRREAA+RGWNL+A  EN
Sbjct: 194 RKYHQQNTAYELNALSMQWNELCQKNIDIKVVCASVETHLNELRREAAERGWNLDAITEN 253

Query: 735 GPSLHSEA 758
           G   +SE+
Sbjct: 254 GQLANSES 261


>ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]
           gi|449503115|ref|XP_004161841.1| PREDICTED:
           pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]
          Length = 256

 Score =  332 bits (852), Expect = 9e-89
 Identities = 162/244 (66%), Positives = 196/244 (80%), Gaps = 3/244 (1%)
 Frame = +3

Query: 15  NGDILMIEAAPPKTSLSG---IAREEIIDALPYIDDDYGDPKVKAEVDKLVEEEMRRSTK 185
           NGDILM+EA PP+ S       A  E+IDALPYIDDDY DP+VKAEVD+LVEEEMRRS+K
Sbjct: 7   NGDILMLEA-PPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65

Query: 186 KPSDFLKNFPVAAKSNFENHPMLAREYERVRAGKPPATMDTSRYTLQPPSENKRSDSNAW 365
           +P+DFLK+ P   K  FE+HPMLAREYERVRAG+PP  +D +RY L+ P  NK++D  AW
Sbjct: 66  RPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAW 125

Query: 366 KQHLETAQSSLQHQVIRLENLDLMSKHGGDIWKHHNQRLEAFLSRMQAIALGYNERIEVV 545
           KQ L+ AQ  L+HQV+RLENLDLMSK+G DIWK HN++LEA LSRMQ +A   NE+IE V
Sbjct: 126 KQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKV 185

Query: 546 NRERKYHQQKTAVELNALSTQWKELCEKNIDIQAACANIENHIEDLRREAADRGWNLEAN 725
           NRERK+HQQ  A EL+ALSTQWKELCEKN++IQ AC  +E  I++LRREAA++GWNLE N
Sbjct: 186 NRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEVN 245

Query: 726 MENG 737
           +ENG
Sbjct: 246 VENG 249


>gb|AFK38781.1| unknown [Lotus japonicus]
          Length = 248

 Score =  324 bits (831), Expect = 2e-86
 Identities = 155/247 (62%), Positives = 193/247 (78%)
 Frame = +3

Query: 18  GDILMIEAAPPKTSLSGIAREEIIDALPYIDDDYGDPKVKAEVDKLVEEEMRRSTKKPSD 197
           G++LM+EA P    L   +  EIIDALPYIDDDYGDP+VK EVD+LVE+EMRRS+KKP+D
Sbjct: 2   GEVLMLEAPPSYGGLPRSSDAEIIDALPYIDDDYGDPRVKVEVDRLVEDEMRRSSKKPAD 61

Query: 198 FLKNFPVAAKSNFENHPMLAREYERVRAGKPPATMDTSRYTLQPPSENKRSDSNAWKQHL 377
           FLK+FP    SN E +PM+AREYERVRAG+PP ++D SRY L+ P  NKR+D  AWK  L
Sbjct: 62  FLKDFPPLPTSNLEGYPMIAREYERVRAGRPPVSIDRSRYELEIPPLNKRNDETAWKHAL 121

Query: 378 ETAQSSLQHQVIRLENLDLMSKHGGDIWKHHNQRLEAFLSRMQAIALGYNERIEVVNRER 557
           + AQ  LQ+Q++R+EN++L+ K+G D WK HN RLE +L RMQ +A   NE+IE VNRER
Sbjct: 122 QRAQRLLQYQMMRMENIELLLKYGPDAWKQHNHRLEVYLLRMQKLAQEQNEKIEKVNRER 181

Query: 558 KYHQQKTAVELNALSTQWKELCEKNIDIQAACANIENHIEDLRREAADRGWNLEANMENG 737
           KYHQQ TA ELNALSTQW ELC+KNIDI AACA++E  I +L+REAA+RGWNL+A  ENG
Sbjct: 182 KYHQQNTAYELNALSTQWNELCQKNIDINAACASVETRINELKREAAERGWNLDAISENG 241

Query: 738 PSLHSEA 758
              +SE+
Sbjct: 242 QLANSES 248