BLASTX nr result

ID: Coptis24_contig00005394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005394
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276574.1| PREDICTED: partner of Y14 and mago-like [Vit...   148   2e-33
emb|CAN63437.1| hypothetical protein VITISV_043015 [Vitis vinife...   148   2e-33
ref|XP_003593095.1| Partner of Y14 and mago A [Medicago truncatu...   124   4e-26
ref|XP_002528618.1| protein with unknown function [Ricinus commu...   122   1e-25
gb|ABK23679.1| unknown [Picea sitchensis]                             118   2e-24

>ref|XP_002276574.1| PREDICTED: partner of Y14 and mago-like [Vitis vinifera]
          Length = 236

 Score =  148 bits (374), Expect = 2e-33
 Identities = 98/207 (47%), Positives = 110/207 (53%), Gaps = 5/207 (2%)
 Frame = -1

Query: 867 EGERVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGM--PDVPPGYDPELD 694
           EGER+LA TRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGAL +K M   + PPGYDP  D
Sbjct: 27  EGERLLAPTRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALWRKEMASQEGPPGYDPPTD 86

Query: 693 AKPXXXXXXXXXXXXXXXXXXXXXXXKDTSFEKSVEPKNREVLSPKVGIHNSEVIESVAC 514
           AKP                       K+       E     VLS +   H SE +ESVA 
Sbjct: 87  AKPKTKSVKRNERKKEKRLQAALDKGKNLEQMVDGEVNQDGVLSAEDVNHGSEFVESVAS 146

Query: 513 QMNTLSVSENYTTVAPMPDSTEGSNTG---TXXXXXXXXXXXXXXXAEAQQQKTERGXXX 343
           QMN L+V+EN TTV P  +S E  N G                    EAQQQK  +    
Sbjct: 147 QMNELTVTENPTTVTPPSESIECLNPGGAAPDIDKRIRALKKKIRLTEAQQQKASQQEMK 206

Query: 342 XXXXXXXXXXEDWRKELKLMEDKKAEL 262
                     E W+KELKL+EDKKAEL
Sbjct: 207 PEQLDKMMKLEGWQKELKLLEDKKAEL 233


>emb|CAN63437.1| hypothetical protein VITISV_043015 [Vitis vinifera]
           gi|298204603|emb|CBI23878.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  148 bits (374), Expect = 2e-33
 Identities = 98/207 (47%), Positives = 110/207 (53%), Gaps = 5/207 (2%)
 Frame = -1

Query: 867 EGERVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGM--PDVPPGYDPELD 694
           EGER+LA TRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGAL +K M   + PPGYDP  D
Sbjct: 25  EGERLLAPTRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALWRKEMASQEGPPGYDPPTD 84

Query: 693 AKPXXXXXXXXXXXXXXXXXXXXXXXKDTSFEKSVEPKNREVLSPKVGIHNSEVIESVAC 514
           AKP                       K+       E     VLS +   H SE +ESVA 
Sbjct: 85  AKPKTKSVKRNERKKEKRLQAALDKGKNLEQMVDGEVNQDGVLSAEDVNHGSEFVESVAS 144

Query: 513 QMNTLSVSENYTTVAPMPDSTEGSNTG---TXXXXXXXXXXXXXXXAEAQQQKTERGXXX 343
           QMN L+V+EN TTV P  +S E  N G                    EAQQQK  +    
Sbjct: 145 QMNELTVTENPTTVTPPSESIECLNPGGAAPDIDKRIRALKKKIRLTEAQQQKASQQEMK 204

Query: 342 XXXXXXXXXXEDWRKELKLMEDKKAEL 262
                     E W+KELKL+EDKKAEL
Sbjct: 205 PEQLDKMMKLEGWQKELKLLEDKKAEL 231


>ref|XP_003593095.1| Partner of Y14 and mago A [Medicago truncatula]
           gi|124360428|gb|ABN08438.1| ENSANGP00000004563 , related
           [Medicago truncatula] gi|355482143|gb|AES63346.1|
           Partner of Y14 and mago A [Medicago truncatula]
          Length = 218

 Score =  124 bits (311), Expect = 4e-26
 Identities = 84/207 (40%), Positives = 108/207 (52%), Gaps = 5/207 (2%)
 Frame = -1

Query: 867 EGERVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGMPD--VPPGYDPELD 694
           +GER+LA TRRPDGTLRKP+RIRAGY PQDEVAIYQ K AL++K M     PPGYDP+LD
Sbjct: 17  DGERILAPTRRPDGTLRKPVRIRAGYTPQDEVAIYQPKPALMRKEMASHIGPPGYDPQLD 76

Query: 693 AKPXXXXXXXXXXXXXXXXXXXXXXXKDTSFEKSVEPKNREVLSPKVGIHNSEVIESVAC 514
           +KP                       K+T+ E +V   +R+     V + NS  + S+  
Sbjct: 77  SKP----KTKAVKRNERKKEKKRLQAKETNLEPTVVEDSRK--QENVIVENS--VHSLTS 128

Query: 513 QMNTLSVSENYTTVAPMPDSTEGS---NTGTXXXXXXXXXXXXXXXAEAQQQKTERGXXX 343
           Q+N L+VS + + V P  +S E S    +                  EA Q+KT      
Sbjct: 129 QINELAVSGDTSIVTPTTNSVEASEPIGSAQDLDKRIRALKKKIRLTEALQEKTAEQDLK 188

Query: 342 XXXXXXXXXXEDWRKELKLMEDKKAEL 262
                     EDWRKELK +EDKKAE+
Sbjct: 189 PEQLEKLAKLEDWRKELKQLEDKKAEI 215


>ref|XP_002528618.1| protein with unknown function [Ricinus communis]
           gi|223531963|gb|EEF33776.1| protein with unknown
           function [Ricinus communis]
          Length = 252

 Score =  122 bits (307), Expect = 1e-25
 Identities = 88/203 (43%), Positives = 103/203 (50%), Gaps = 6/203 (2%)
 Frame = -1

Query: 867 EGERVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGMPD---VPPGYDPEL 697
           EGER+LA TRRPDGTLRKPIRIRAGYVPQDEVAIYQS+GAL KK M     VPPGYDP +
Sbjct: 28  EGERILAPTRRPDGTLRKPIRIRAGYVPQDEVAIYQSRGALWKKEMQSLHVVPPGYDPGM 87

Query: 696 DAKPXXXXXXXXXXXXXXXXXXXXXXXKDTSFEKSVEPKNREVLSPKVGIHNSEVIESVA 517
           DAKP                       K+     + + K REVL  +   H SE ++S+ 
Sbjct: 88  DAKPKTKSVKRNERKKEKRLQAALEKGKNLDASAAGDMK-REVLPDEDVGHASESVKSLT 146

Query: 516 CQMNTLSVSENYTTVAPMPDSTE---GSNTGTXXXXXXXXXXXXXXXAEAQQQKTERGXX 346
            QMN L VS N     P  DSTE    + +                 AEAQQQK      
Sbjct: 147 SQMNELDVSANPVLSIP-GDSTETLDPNASSQDIDKRIRALKKKIRQAEAQQQKATSQDM 205

Query: 345 XXXXXXXXXXXEDWRKELKLMED 277
                      E W +ELK++ED
Sbjct: 206 KPEQLEKLAKLEGWHQELKILED 228


>gb|ABK23679.1| unknown [Picea sitchensis]
          Length = 228

 Score =  118 bits (296), Expect = 2e-24
 Identities = 76/206 (36%), Positives = 103/206 (50%), Gaps = 2/206 (0%)
 Frame = -1

Query: 867 EGERVLAATRRPDGTLRKPIRIRAGYVPQDEVAIYQSKGALLKKGMPDVPPGYDPELDAK 688
           EGER++A TRRPDGTLRKPIRIRAGYVPQ+EVAIYQSKGALL++GMP+VPPGYDP +++K
Sbjct: 27  EGERIVAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQSKGALLRRGMPEVPPGYDPLVESK 86

Query: 687 PXXXXXXXXXXXXXXXXXXXXXXXKDTSFEKSVEPKNREVLSPKVGIHNSEVIESVACQM 508
           P                            + S    N +  + +   +    +E+VA QM
Sbjct: 87  PKTKSAKRNERRKEKKQQASIASSTSEKGQASENTVNGQAAATENRANRDPDVEAVAQQM 146

Query: 507 NTLSVSENYTTVAPMPDSTEGSNTGTXXXXXXXXXXXXXXXAEAQQQKT--ERGXXXXXX 334
            +L+V    T+   +  S+E +N                      QQ +    G      
Sbjct: 147 GSLTV----TSEVSVSVSSEQANPERMDLDKRIRALKKKIRLTESQQASMAGEGTLNPEQ 202

Query: 333 XXXXXXXEDWRKELKLMEDKKAELPS 256
                  + WRKELK +E+K+  L S
Sbjct: 203 REKLAKLDTWRKELKDLEEKRMALRS 228


Top