BLASTX nr result

ID: Coptis24_contig00005391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005391
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...   119   3e-25
ref|XP_003535577.1| PREDICTED: ABC transporter C family member 1...   115   4e-24
ref|XP_003592151.1| Multidrug resistance protein ABC transporter...   115   4e-24
gb|AAX92722.1| ABC transporter, putative [Oryza sativa Japonica ...   114   6e-24
gb|EEC67702.1| hypothetical protein OsI_35171 [Oryza sativa Indi...   114   6e-24

>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
           gi|223547514|gb|EEF49009.1| multidrug
           resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/86 (68%), Positives = 64/86 (74%)
 Frame = +2

Query: 2   RIGEFPYWFHQTWTTSLQLCIALGILIHXXXXXXXXXXXXXXXXXXCNTPLAKLQHKFQT 181
           RIGEFP+WFHQTWTTSLQLCI+L IL +                  CNTPLAKLQHKFQ+
Sbjct: 418 RIGEFPFWFHQTWTTSLQLCISLVILFNAVGLATLAALVVIIITVLCNTPLAKLQHKFQS 477

Query: 182 KLMEAQDERLKATAEALVNTKVLKLY 259
           KLMEAQDERLKA +EALVN KVLKLY
Sbjct: 478 KLMEAQDERLKACSEALVNMKVLKLY 503


>ref|XP_003535577.1| PREDICTED: ABC transporter C family member 10-like, partial
           [Glycine max]
          Length = 1509

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/86 (66%), Positives = 62/86 (72%)
 Frame = +2

Query: 2   RIGEFPYWFHQTWTTSLQLCIALGILIHXXXXXXXXXXXXXXXXXXCNTPLAKLQHKFQT 181
           RIGEFPYWFHQTWTTS+QLCIAL +L                    CNTPLAKLQHKFQ 
Sbjct: 446 RIGEFPYWFHQTWTTSVQLCIALVVLFRAVGLATFASLAVIVLTVLCNTPLAKLQHKFQR 505

Query: 182 KLMEAQDERLKATAEALVNTKVLKLY 259
           KLM +QDERLKAT+EALV+ KVLKLY
Sbjct: 506 KLMVSQDERLKATSEALVSMKVLKLY 531


>ref|XP_003592151.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula] gi|355481199|gb|AES62402.1| Multidrug
           resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 1516

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/86 (66%), Positives = 61/86 (70%)
 Frame = +2

Query: 2   RIGEFPYWFHQTWTTSLQLCIALGILIHXXXXXXXXXXXXXXXXXXCNTPLAKLQHKFQT 181
           RIGEFPYWFHQTWTTS QLCI+L IL                    CN P+AKLQHKFQ+
Sbjct: 413 RIGEFPYWFHQTWTTSFQLCISLVILFRAIGIATIASLVVIVITVLCNAPIAKLQHKFQS 472

Query: 182 KLMEAQDERLKATAEALVNTKVLKLY 259
           KLM AQDERLKAT+EALVN KVLKLY
Sbjct: 473 KLMVAQDERLKATSEALVNMKVLKLY 498


>gb|AAX92722.1| ABC transporter, putative [Oryza sativa Japonica Group]
           gi|222615539|gb|EEE51671.1| hypothetical protein
           OsJ_33016 [Oryza sativa Japonica Group]
          Length = 1474

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/86 (66%), Positives = 61/86 (70%)
 Frame = +2

Query: 2   RIGEFPYWFHQTWTTSLQLCIALGILIHXXXXXXXXXXXXXXXXXXCNTPLAKLQHKFQT 181
           RIGEFPYWFHQTWTTS+QLCIAL IL +                  CN PLAKLQHKFQT
Sbjct: 411 RIGEFPYWFHQTWTTSVQLCIALAILYNAVGLAMISSLVVIIITVICNAPLAKLQHKFQT 470

Query: 182 KLMEAQDERLKATAEALVNTKVLKLY 259
           KLMEAQD RLKA  E+LV+ KVLKLY
Sbjct: 471 KLMEAQDVRLKAMTESLVHMKVLKLY 496


>gb|EEC67702.1| hypothetical protein OsI_35171 [Oryza sativa Indica Group]
          Length = 1474

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/86 (66%), Positives = 61/86 (70%)
 Frame = +2

Query: 2   RIGEFPYWFHQTWTTSLQLCIALGILIHXXXXXXXXXXXXXXXXXXCNTPLAKLQHKFQT 181
           RIGEFPYWFHQTWTTS+QLCIAL IL +                  CN PLAKLQHKFQT
Sbjct: 411 RIGEFPYWFHQTWTTSVQLCIALAILYNAVGLAMISSLVVIIITVICNAPLAKLQHKFQT 470

Query: 182 KLMEAQDERLKATAEALVNTKVLKLY 259
           KLMEAQD RLKA  E+LV+ KVLKLY
Sbjct: 471 KLMEAQDVRLKAMTESLVHMKVLKLY 496


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