BLASTX nr result

ID: Coptis24_contig00005388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005388
         (1481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521918.1| conserved hypothetical protein [Ricinus comm...   659   0.0  
ref|XP_004144425.1| PREDICTED: kelch repeat-containing protein A...   638   e-180
ref|XP_002265018.1| PREDICTED: kelch repeat-containing protein A...   637   e-180
ref|XP_002316438.1| predicted protein [Populus trichocarpa] gi|2...   630   e-178
ref|XP_003531754.1| PREDICTED: kelch repeat-containing protein A...   628   e-177

>ref|XP_002521918.1| conserved hypothetical protein [Ricinus communis]
            gi|223538843|gb|EEF40442.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 425

 Score =  659 bits (1700), Expect = 0.0
 Identities = 304/351 (86%), Positives = 329/351 (93%), Gaps = 3/351 (0%)
 Frame = +1

Query: 184  DKVKEKI---VVSATFADLPGPQLEWEKMASAPVPRLDGAAIQIDNLLFVFAGYGTIDYV 354
            DK K+ I    +SATFADLP P L+WEKM SAPVPRLDGAAIQI NLL+VFAGYGTIDYV
Sbjct: 73   DKDKKDIPERFLSATFADLPAPDLKWEKMTSAPVPRLDGAAIQIKNLLYVFAGYGTIDYV 132

Query: 355  HTHVDVYNFSDNSWGRRFDMPKEMAHSHLGMATDGRYIYVVTGQYGPQCRGPTAHTFVLD 534
            H+HVD+YNF+DN+WG+RFDMPKEMAHSHLGM TDGRYIYVV+GQYGPQCRGPTAHTFVLD
Sbjct: 133  HSHVDIYNFTDNTWGKRFDMPKEMAHSHLGMVTDGRYIYVVSGQYGPQCRGPTAHTFVLD 192

Query: 535  TKTRQWRDMLPLPVPRYAPATQLWRGRLHVMGGSKEDRHEPSLEHWSIAVKNGKVLEKEW 714
            T+T+QW+DM PLPVPRYAPATQLWRGRLHVMGGSKE+RH P LEHWS+AVK+GK LEKEW
Sbjct: 193  TETKQWQDMPPLPVPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSLAVKDGKALEKEW 252

Query: 715  RNEIPIPRGGPHRACVVVNDQLIVIGGQEGDFMAKPGSPIFKCSRRNEVVYGDVYMLDDD 894
            R EIPIPRGGPHRACVVVNDQLIVIGGQEGDFMAKPGSPIFKCSRRNEVVYGDVYMLDDD
Sbjct: 253  RTEIPIPRGGPHRACVVVNDQLIVIGGQEGDFMAKPGSPIFKCSRRNEVVYGDVYMLDDD 312

Query: 895  MKWKGLPSMPKPDSHIEFAWAIVNNSIVIAGGTTDKHPVTKKMVLNGEIFQFNLNTLKWS 1074
            MKWK LPSMPKPDSHIEFAW +VNNSIVI GGTTDKHPVTKKM+LNGE+FQFNL+  KWS
Sbjct: 313  MKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTDKHPVTKKMILNGEVFQFNLDNTKWS 372

Query: 1075 VVGKLPFRVKTTLVGFWDGWFYFTSGQRDRGPDDPAPRKVLGDMFRTKLKL 1227
            V+GKLP+RVKTTLVGFW+GW YFTSGQRDRGPDDPAPRKVLG+M+RTKLKL
Sbjct: 373  VIGKLPYRVKTTLVGFWNGWLYFTSGQRDRGPDDPAPRKVLGEMWRTKLKL 423


>ref|XP_004144425.1| PREDICTED: kelch repeat-containing protein At3g27220-like [Cucumis
            sativus]
          Length = 427

 Score =  638 bits (1646), Expect = e-180
 Identities = 291/340 (85%), Positives = 320/340 (94%)
 Frame = +1

Query: 208  VSATFADLPGPQLEWEKMASAPVPRLDGAAIQIDNLLFVFAGYGTIDYVHTHVDVYNFSD 387
            +SATFADLP P+L W+KM +APVPRLDGAAIQI NLLFVFAGYGTID VH+HVDVYNF+D
Sbjct: 86   LSATFADLPAPELTWKKMTTAPVPRLDGAAIQIKNLLFVFAGYGTIDSVHSHVDVYNFTD 145

Query: 388  NSWGRRFDMPKEMAHSHLGMATDGRYIYVVTGQYGPQCRGPTAHTFVLDTKTRQWRDMLP 567
            N+WG RFDMPKEMAHSHLGMATDGRYIYVVTGQYGPQCRGPTAHTFVLDT+TRQW+DM P
Sbjct: 146  NTWGGRFDMPKEMAHSHLGMATDGRYIYVVTGQYGPQCRGPTAHTFVLDTETRQWQDMPP 205

Query: 568  LPVPRYAPATQLWRGRLHVMGGSKEDRHEPSLEHWSIAVKNGKVLEKEWRNEIPIPRGGP 747
            LPVPRYAPATQLWRGRLHVMGGS E+RH P+LEHWS+AVK+GK LEKEWR+EIPIPRGGP
Sbjct: 206  LPVPRYAPATQLWRGRLHVMGGSMENRHTPALEHWSLAVKDGKALEKEWRSEIPIPRGGP 265

Query: 748  HRACVVVNDQLIVIGGQEGDFMAKPGSPIFKCSRRNEVVYGDVYMLDDDMKWKGLPSMPK 927
            HRAC+VV+D+L VIGGQEGDFMAKPGSPIFKCSRRNEVVY DVYMLDDDMKWK LPSMPK
Sbjct: 266  HRACIVVDDRLYVIGGQEGDFMAKPGSPIFKCSRRNEVVYSDVYMLDDDMKWKVLPSMPK 325

Query: 928  PDSHIEFAWAIVNNSIVIAGGTTDKHPVTKKMVLNGEIFQFNLNTLKWSVVGKLPFRVKT 1107
            PDSHIEFAW +VNNSIVI GGTTDKHP TKKMVLNGE+FQF+L   +WSV+GKLPFRVKT
Sbjct: 326  PDSHIEFAWVVVNNSIVIVGGTTDKHPQTKKMVLNGEVFQFSLRLQQWSVIGKLPFRVKT 385

Query: 1108 TLVGFWDGWFYFTSGQRDRGPDDPAPRKVLGDMFRTKLKL 1227
            TLVG+WDGW YFTSGQRD+GPDDP+P+KV+G+M+RTKLKL
Sbjct: 386  TLVGYWDGWLYFTSGQRDKGPDDPSPKKVIGEMWRTKLKL 425


>ref|XP_002265018.1| PREDICTED: kelch repeat-containing protein At3g27220 [Vitis vinifera]
            gi|297735771|emb|CBI18458.3| unnamed protein product
            [Vitis vinifera]
          Length = 426

 Score =  637 bits (1644), Expect = e-180
 Identities = 298/378 (78%), Positives = 334/378 (88%), Gaps = 15/378 (3%)
 Frame = +1

Query: 139  WYLQNSR-TVTVPNNF-----------DKVKEKI---VVSATFADLPGPQLEWEKMASAP 273
            W   +SR TV VP+             DK K  +   V+SATFADLP P+LEWEKMA AP
Sbjct: 49   WAFDDSRSTVIVPHQQPQKAKEGSDVKDKKKADVPERVLSATFADLPAPELEWEKMAPAP 108

Query: 274  VPRLDGAAIQIDNLLFVFAGYGTIDYVHTHVDVYNFSDNSWGRRFDMPKEMAHSHLGMAT 453
            VPRLDGAAIQI NLL+VFAGYGTID+VH+HVDVYNF+DN+WG RFDMPKEMAHSHLGM T
Sbjct: 109  VPRLDGAAIQIKNLLYVFAGYGTIDFVHSHVDVYNFTDNTWGGRFDMPKEMAHSHLGMVT 168

Query: 454  DGRYIYVVTGQYGPQCRGPTAHTFVLDTKTRQWRDMLPLPVPRYAPATQLWRGRLHVMGG 633
            DGRYIYVVTGQYGPQCRGPTA TFVLDTKT+QW DM PLPVPRYAPATQLWRGRLHVMGG
Sbjct: 169  DGRYIYVVTGQYGPQCRGPTARTFVLDTKTKQWSDMPPLPVPRYAPATQLWRGRLHVMGG 228

Query: 634  SKEDRHEPSLEHWSIAVKNGKVLEKEWRNEIPIPRGGPHRACVVVNDQLIVIGGQEGDFM 813
            S E+RH P+LEHWS+AVKNGK LEKEWR+EIPIPRGGPHRAC+VV+D+L+VIGGQEGDFM
Sbjct: 229  SGENRHTPALEHWSLAVKNGKALEKEWRSEIPIPRGGPHRACIVVDDRLLVIGGQEGDFM 288

Query: 814  AKPGSPIFKCSRRNEVVYGDVYMLDDDMKWKGLPSMPKPDSHIEFAWAIVNNSIVIAGGT 993
            AKPGSPIFKCSRRNEVV+ DVYMLDD+MKWK LP MPKPDSHIEFAW +VN+SI+I GGT
Sbjct: 289  AKPGSPIFKCSRRNEVVFSDVYMLDDEMKWKNLPPMPKPDSHIEFAWVMVNHSIIIVGGT 348

Query: 994  TDKHPVTKKMVLNGEIFQFNLNTLKWSVVGKLPFRVKTTLVGFWDGWFYFTSGQRDRGPD 1173
            T+KHP+TKKMVL GE+FQFNL++LKWSV+GKLP+RVKTTL GFW+GW YFTSGQRD+GPD
Sbjct: 349  TEKHPITKKMVLVGEVFQFNLDSLKWSVIGKLPYRVKTTLAGFWNGWLYFTSGQRDKGPD 408

Query: 1174 DPAPRKVLGDMFRTKLKL 1227
            DPAP+KVLG+M+RTKL L
Sbjct: 409  DPAPKKVLGEMWRTKLSL 426


>ref|XP_002316438.1| predicted protein [Populus trichocarpa] gi|222865478|gb|EEF02609.1|
            predicted protein [Populus trichocarpa]
          Length = 424

 Score =  630 bits (1624), Expect = e-178
 Identities = 285/340 (83%), Positives = 322/340 (94%)
 Frame = +1

Query: 208  VSATFADLPGPQLEWEKMASAPVPRLDGAAIQIDNLLFVFAGYGTIDYVHTHVDVYNFSD 387
            +SATFADLP P+L+WEKMA+APVPRLDGAAIQI +LL+VFAGYGTID VH+HVD+YNF+D
Sbjct: 83   LSATFADLPAPELKWEKMANAPVPRLDGAAIQIKDLLYVFAGYGTIDLVHSHVDIYNFTD 142

Query: 388  NSWGRRFDMPKEMAHSHLGMATDGRYIYVVTGQYGPQCRGPTAHTFVLDTKTRQWRDMLP 567
            N+WGRRF+MPKEMAHSHLGM TDGRYIYVVTGQYGPQCRGPTA  FVLDTKT+QW+D+ P
Sbjct: 143  NTWGRRFNMPKEMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTARNFVLDTKTKQWQDLPP 202

Query: 568  LPVPRYAPATQLWRGRLHVMGGSKEDRHEPSLEHWSIAVKNGKVLEKEWRNEIPIPRGGP 747
            LPVPRYAPATQLWRGRLHVMGGSKE+RH P+LEHWS+AVK+GK LEKEWR EIPIPRGGP
Sbjct: 203  LPVPRYAPATQLWRGRLHVMGGSKENRHTPALEHWSLAVKDGKALEKEWRPEIPIPRGGP 262

Query: 748  HRACVVVNDQLIVIGGQEGDFMAKPGSPIFKCSRRNEVVYGDVYMLDDDMKWKGLPSMPK 927
            HRACVVV+D+L++IGGQEGDFMAKPGSPIFKCSRRNE+VY +V+MLDD+MKWK LP MPK
Sbjct: 263  HRACVVVSDRLLIIGGQEGDFMAKPGSPIFKCSRRNEIVYDEVHMLDDEMKWKPLPPMPK 322

Query: 928  PDSHIEFAWAIVNNSIVIAGGTTDKHPVTKKMVLNGEIFQFNLNTLKWSVVGKLPFRVKT 1107
            PDSHIEFAWAIVNNSIVIAGGTT+KHP TKKMVL GE+F+FNL+TL WSV+GKLP+RVKT
Sbjct: 323  PDSHIEFAWAIVNNSIVIAGGTTEKHPTTKKMVLVGEVFRFNLDTLTWSVIGKLPYRVKT 382

Query: 1108 TLVGFWDGWFYFTSGQRDRGPDDPAPRKVLGDMFRTKLKL 1227
            TLVGFW+GW YFTSGQRDRGPDDPAP+KV+ DM+RTKL+L
Sbjct: 383  TLVGFWNGWLYFTSGQRDRGPDDPAPKKVIADMWRTKLRL 422


>ref|XP_003531754.1| PREDICTED: kelch repeat-containing protein At3g27220-like [Glycine
            max]
          Length = 410

 Score =  628 bits (1620), Expect = e-177
 Identities = 289/359 (80%), Positives = 326/359 (90%), Gaps = 6/359 (1%)
 Frame = +1

Query: 169  VPNNFDKVKEKIV------VSATFADLPGPQLEWEKMASAPVPRLDGAAIQIDNLLFVFA 330
            VP+N +K K +        ++A +ADL  PQL+W+KMA APVPRLDGAAIQI +LLFVFA
Sbjct: 50   VPSNHNKKKYENATASGRFLAAAYADLDAPQLKWQKMAPAPVPRLDGAAIQIRDLLFVFA 109

Query: 331  GYGTIDYVHTHVDVYNFSDNSWGRRFDMPKEMAHSHLGMATDGRYIYVVTGQYGPQCRGP 510
            GYGTID+VH+HVDVYNF+DN+WG RFDMPKEMAHSHLGM TDGRYIYVVTGQYGPQCRGP
Sbjct: 110  GYGTIDFVHSHVDVYNFTDNTWGGRFDMPKEMAHSHLGMVTDGRYIYVVTGQYGPQCRGP 169

Query: 511  TAHTFVLDTKTRQWRDMLPLPVPRYAPATQLWRGRLHVMGGSKEDRHEPSLEHWSIAVKN 690
            TAH FVLDT+TR+WRD+ PLPVPRYAPATQLWRGRLHVMGGSKE+RH P LEHWS+AVK+
Sbjct: 170  TAHNFVLDTQTRKWRDLPPLPVPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSLAVKD 229

Query: 691  GKVLEKEWRNEIPIPRGGPHRACVVVNDQLIVIGGQEGDFMAKPGSPIFKCSRRNEVVYG 870
            GK LE EWR+EIPIPRGGPHRACVVV+D+L V+GGQEGDFMAKPGSPIFKCSRR EVVY 
Sbjct: 230  GKALENEWRSEIPIPRGGPHRACVVVDDRLYVLGGQEGDFMAKPGSPIFKCSRRQEVVYT 289

Query: 871  DVYMLDDDMKWKGLPSMPKPDSHIEFAWAIVNNSIVIAGGTTDKHPVTKKMVLNGEIFQF 1050
            DVYMLDDDMKWK LP MPK +SHIEFAWA+VNNSIVI GGTT+KHP+TKKMVLNGE+ QF
Sbjct: 290  DVYMLDDDMKWKTLPPMPKANSHIEFAWALVNNSIVIVGGTTEKHPITKKMVLNGEVVQF 349

Query: 1051 NLNTLKWSVVGKLPFRVKTTLVGFWDGWFYFTSGQRDRGPDDPAPRKVLGDMFRTKLKL 1227
            NLNTLKWSV+GKLP+RVKTTLVGFW+GW YFTSGQRD+GPDDP+P+KV+G+M+RTKLKL
Sbjct: 350  NLNTLKWSVIGKLPYRVKTTLVGFWNGWLYFTSGQRDKGPDDPSPKKVIGEMWRTKLKL 408


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