BLASTX nr result
ID: Coptis24_contig00005387
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005387 (594 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI35797.3| unnamed protein product [Vitis vinifera] 278 7e-73 ref|NP_188046.1| proteasome subunit alpha type-5-B [Arabidopsis ... 277 1e-72 gb|AFK43363.1| unknown [Medicago truncatula] gi|388521531|gb|AFK... 277 1e-72 gb|AFK36289.1| unknown [Medicago truncatula] 277 1e-72 gb|ACJ84022.1| unknown [Medicago truncatula] 277 1e-72 >emb|CBI35797.3| unnamed protein product [Vitis vinifera] Length = 293 Score = 278 bits (710), Expect = 7e-73 Identities = 148/188 (78%), Positives = 155/188 (82%) Frame = -2 Query: 566 DLYSSVQSISKMFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLA 387 +L+ S Q KMFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVL Sbjct: 48 ELFQSEQY--KMFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVL- 104 Query: 386 XXXXXXXXXXXXXXXXXXXXXEGVVLAVEKRITSPLLEPSSVEKIMEIDDHVGCAMSGLI 207 AVEKRITSPLLEPSSVEKIMEID+H+GCAMSGLI Sbjct: 105 --------------------------AVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLI 138 Query: 206 ADARTLVEHARVETQNHRFSYGEPMTVDSTAQAICDLALRFGEGEEESMSRPFGVSLLIA 27 ADARTLVEHARVETQNHRFSYGEPMTV+ST QA+CDLALRFGEG+EESMSRPFGVSLLIA Sbjct: 139 ADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIA 198 Query: 26 GHDENGPS 3 GHDENGPS Sbjct: 199 GHDENGPS 206 >ref|NP_188046.1| proteasome subunit alpha type-5-B [Arabidopsis thaliana] gi|18206373|sp|Q42134.2|PSA5B_ARATH RecName: Full=Proteasome subunit alpha type-5-B; AltName: Full=20S proteasome alpha subunit E-2; AltName: Full=Proteasome component Z gi|13877965|gb|AAK44060.1|AF370245_1 putative 20S proteasome subunit PAE2 [Arabidopsis thaliana] gi|3421090|gb|AAC32061.1| 20S proteasome subunit PAE2 [Arabidopsis thaliana] gi|9279577|dbj|BAB01035.1| 20S proteasome subunit PAE-like protein [Arabidopsis thaliana] gi|17065644|gb|AAL33816.1| putative 20S proteasome subunit PAE2 [Arabidopsis thaliana] gi|332641977|gb|AEE75498.1| proteasome subunit alpha type-5-B [Arabidopsis thaliana] Length = 237 Score = 277 bits (708), Expect = 1e-72 Identities = 145/177 (81%), Positives = 149/177 (84%) Frame = -2 Query: 533 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAXXXXXXXXXXX 354 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+KTKEGVVL Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVL------------ 48 Query: 353 XXXXXXXXXXEGVVLAVEKRITSPLLEPSSVEKIMEIDDHVGCAMSGLIADARTLVEHAR 174 AVEKRITSPLLEPSSVEKIMEIDDH+GCAMSGLIADARTLVEHAR Sbjct: 49 ---------------AVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHAR 93 Query: 173 VETQNHRFSYGEPMTVDSTAQAICDLALRFGEGEEESMSRPFGVSLLIAGHDENGPS 3 VETQNHRFSYGEPMTV+ST QA+CDLALRFGEGEEESMSRPFGVSLLIAGHDENGPS Sbjct: 94 VETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPS 150 >gb|AFK43363.1| unknown [Medicago truncatula] gi|388521531|gb|AFK48827.1| unknown [Medicago truncatula] Length = 237 Score = 277 bits (708), Expect = 1e-72 Identities = 145/177 (81%), Positives = 149/177 (84%) Frame = -2 Query: 533 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAXXXXXXXXXXX 354 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVL Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVL------------ 48 Query: 353 XXXXXXXXXXEGVVLAVEKRITSPLLEPSSVEKIMEIDDHVGCAMSGLIADARTLVEHAR 174 AVEKRITSPLLEPSSVEKIMEIDDH+GCAMSGLIADARTLVEHAR Sbjct: 49 ---------------AVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHAR 93 Query: 173 VETQNHRFSYGEPMTVDSTAQAICDLALRFGEGEEESMSRPFGVSLLIAGHDENGPS 3 VETQNHRFSYGEPMTV+ST QA+CDLALRFGEG+EESMSRPFGVSLLIAGHDENGPS Sbjct: 94 VETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPS 150 >gb|AFK36289.1| unknown [Medicago truncatula] Length = 186 Score = 277 bits (708), Expect = 1e-72 Identities = 145/177 (81%), Positives = 149/177 (84%) Frame = -2 Query: 533 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAXXXXXXXXXXX 354 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVL Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVL------------ 48 Query: 353 XXXXXXXXXXEGVVLAVEKRITSPLLEPSSVEKIMEIDDHVGCAMSGLIADARTLVEHAR 174 AVEKRITSPLLEPSSVEKIMEIDDH+GCAMSGLIADARTLVEHAR Sbjct: 49 ---------------AVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHAR 93 Query: 173 VETQNHRFSYGEPMTVDSTAQAICDLALRFGEGEEESMSRPFGVSLLIAGHDENGPS 3 VETQNHRFSYGEPMTV+ST QA+CDLALRFGEG+EESMSRPFGVSLLIAGHDENGPS Sbjct: 94 VETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPS 150 >gb|ACJ84022.1| unknown [Medicago truncatula] Length = 171 Score = 277 bits (708), Expect = 1e-72 Identities = 145/177 (81%), Positives = 149/177 (84%) Frame = -2 Query: 533 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAXXXXXXXXXXX 354 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVL Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVL------------ 48 Query: 353 XXXXXXXXXXEGVVLAVEKRITSPLLEPSSVEKIMEIDDHVGCAMSGLIADARTLVEHAR 174 AVEKRITSPLLEPSSVEKIMEIDDH+GCAMSGLIADARTLVEHAR Sbjct: 49 ---------------AVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHAR 93 Query: 173 VETQNHRFSYGEPMTVDSTAQAICDLALRFGEGEEESMSRPFGVSLLIAGHDENGPS 3 VETQNHRFSYGEPMTV+ST QA+CDLALRFGEG+EESMSRPFGVSLLIAGHDENGPS Sbjct: 94 VETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPS 150