BLASTX nr result
ID: Coptis24_contig00005368
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005368 (1650 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [... 512 e-142 emb|CBI23232.3| unnamed protein product [Vitis vinifera] 512 e-142 ref|XP_004158004.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA ... 469 e-130 ref|XP_004153226.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l... 467 e-129 ref|XP_004145179.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l... 467 e-129 >ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Vitis vinifera] Length = 447 Score = 512 bits (1319), Expect = e-142 Identities = 257/424 (60%), Positives = 305/424 (71%), Gaps = 25/424 (5%) Frame = +3 Query: 3 SIHPVSKIMSWSCSQCTYLNPPSQTXXXXXXXXXXXXXXXXXXXXX-----------ACT 149 ++H K MSW+CS+CT++NP SQT ACT Sbjct: 23 TLHFQFKPMSWTCSKCTFINPSSQTSTCLICSSSSSIPQSPSSSSAPSPSTPKWSCKACT 82 Query: 150 FTNTGGNSNCEICGTTLPVSLISDCKEL-------DLGSSIGSMLLPFEPSNKRKEGD-- 302 F N N CE+CGT VS +S ++L +L SS+GS+ LP + +KRK D Sbjct: 83 FLNPYRNPICEVCGTRASVSSLSCFEDLNCTDPDGELDSSVGSVFLPLQRCSKRKNRDPV 142 Query: 303 -----SESSVGFRLPKIAKKKESLLEDNTQDAGLSTLKILTYNVWFREDLELSKRMKALG 467 + S GF K A K LED D+ LS+LKIL+YNVWFREDLE+ KRM+ALG Sbjct: 143 EIDAAAGGSGGFGGVKSANKAVVALEDTDSDSVLSSLKILSYNVWFREDLEMDKRMQALG 202 Query: 468 DLIEQHSPDVMCFQEVTPNIYHIFQQSSWWKAYHCSVSTAMYNVKPYFCMLLSKVPVKSF 647 DLI+ HSPD++CFQEVTPNIY +FQQS WWK Y CSV M +++PYFCMLLSK+PVKSF Sbjct: 203 DLIQLHSPDLICFQEVTPNIYDVFQQSCWWKVYRCSVPNEMAHLRPYFCMLLSKLPVKSF 262 Query: 648 SCKPFSNSIMGRELCVTEIEVKAGKSLVVATSHLESPCPAPPKWDQMYSKERVDQAKEAL 827 SCK FSNSIMGRELC+ E+EV+AGK LV+ATSHLESPCPAPPKWDQMYSKERVDQAKEAL Sbjct: 263 SCKRFSNSIMGRELCIAELEVQAGKPLVLATSHLESPCPAPPKWDQMYSKERVDQAKEAL 322 Query: 828 TSLKNSRNVVFGGDMNWDDKLDGKFPLLDGWVDAWAEQRPGEDGYTYDTKANPMLSGNRK 1007 L + NV+FGGDMNWD+K DG+FPL DGWVDAWA+ RPGE+G+TYDTK+N MLSGNR Sbjct: 323 NLLTKNPNVIFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQMLSGNRT 382 Query: 1008 LQKRLDRFCCSLQDYKIGGIDMIGTEALPGLSYCKEKKVKNDVQKLTLPVLPSDHYGLIL 1187 LQKRLDRF C L D+KI IDMIG E +PGLSYCKEKKV+ ++Q+L LPVLPSDHYGL+L Sbjct: 383 LQKRLDRFMCRLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLL 442 Query: 1188 TIHS 1199 TI S Sbjct: 443 TISS 446 >emb|CBI23232.3| unnamed protein product [Vitis vinifera] Length = 961 Score = 512 bits (1319), Expect = e-142 Identities = 257/424 (60%), Positives = 305/424 (71%), Gaps = 25/424 (5%) Frame = +3 Query: 3 SIHPVSKIMSWSCSQCTYLNPPSQTXXXXXXXXXXXXXXXXXXXXX-----------ACT 149 ++H K MSW+CS+CT++NP SQT ACT Sbjct: 537 TLHFQFKPMSWTCSKCTFINPSSQTSTCLICSSSSSIPQSPSSSSAPSPSTPKWSCKACT 596 Query: 150 FTNTGGNSNCEICGTTLPVSLISDCKEL-------DLGSSIGSMLLPFEPSNKRKEGD-- 302 F N N CE+CGT VS +S ++L +L SS+GS+ LP + +KRK D Sbjct: 597 FLNPYRNPICEVCGTRASVSSLSCFEDLNCTDPDGELDSSVGSVFLPLQRCSKRKNRDPV 656 Query: 303 -----SESSVGFRLPKIAKKKESLLEDNTQDAGLSTLKILTYNVWFREDLELSKRMKALG 467 + S GF K A K LED D+ LS+LKIL+YNVWFREDLE+ KRM+ALG Sbjct: 657 EIDAAAGGSGGFGGVKSANKAVVALEDTDSDSVLSSLKILSYNVWFREDLEMDKRMQALG 716 Query: 468 DLIEQHSPDVMCFQEVTPNIYHIFQQSSWWKAYHCSVSTAMYNVKPYFCMLLSKVPVKSF 647 DLI+ HSPD++CFQEVTPNIY +FQQS WWK Y CSV M +++PYFCMLLSK+PVKSF Sbjct: 717 DLIQLHSPDLICFQEVTPNIYDVFQQSCWWKVYRCSVPNEMAHLRPYFCMLLSKLPVKSF 776 Query: 648 SCKPFSNSIMGRELCVTEIEVKAGKSLVVATSHLESPCPAPPKWDQMYSKERVDQAKEAL 827 SCK FSNSIMGRELC+ E+EV+AGK LV+ATSHLESPCPAPPKWDQMYSKERVDQAKEAL Sbjct: 777 SCKRFSNSIMGRELCIAELEVQAGKPLVLATSHLESPCPAPPKWDQMYSKERVDQAKEAL 836 Query: 828 TSLKNSRNVVFGGDMNWDDKLDGKFPLLDGWVDAWAEQRPGEDGYTYDTKANPMLSGNRK 1007 L + NV+FGGDMNWD+K DG+FPL DGWVDAWA+ RPGE+G+TYDTK+N MLSGNR Sbjct: 837 NLLTKNPNVIFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQMLSGNRT 896 Query: 1008 LQKRLDRFCCSLQDYKIGGIDMIGTEALPGLSYCKEKKVKNDVQKLTLPVLPSDHYGLIL 1187 LQKRLDRF C L D+KI IDMIG E +PGLSYCKEKKV+ ++Q+L LPVLPSDHYGL+L Sbjct: 897 LQKRLDRFMCRLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLL 956 Query: 1188 TIHS 1199 TI S Sbjct: 957 TISS 960 >ref|XP_004158004.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA phosphodiesterase 2-like [Cucumis sativus] Length = 463 Score = 469 bits (1207), Expect = e-130 Identities = 235/413 (56%), Positives = 286/413 (69%), Gaps = 23/413 (5%) Frame = +3 Query: 30 SWSCSQCTYLNPPSQTXXXXXXXXXXXXXXXXXXXXX-------ACTFTNTGGNSNCEIC 188 SWSC +CT+LNP SQ ACTF N+ NS CE+C Sbjct: 51 SWSCKKCTFLNPSSQKAACKICLSPSSPPPSSSSSSTTPKWSCKACTFLNSFTNSECELC 110 Query: 189 GTTLPVSLISDCKEL-------DLGSSIGSMLLPFEPSNKRK---------EGDSESSVG 320 GT P +S K+L + SS+GS+ P +PS KRK G+S Sbjct: 111 GTRAPALSLSSFKDLIDVSEDENADSSVGSVFFPLQPSKKRKMDDPVPLESHGESAELST 170 Query: 321 FRLPKIAKKKESLLEDNTQDAGLSTLKILTYNVWFREDLELSKRMKALGDLIEQHSPDVM 500 FR K + + + D++ A L T+KI+TYNVWFREDLEL RM+ALG LI++HSPDV+ Sbjct: 171 FRGTKASMNAVAEMGDSSSRACLKTVKIMTYNVWFREDLELRNRMRALGQLIQRHSPDVI 230 Query: 501 CFQEVTPNIYHIFQQSSWWKAYHCSVSTAMYNVKPYFCMLLSKVPVKSFSCKPFSNSIMG 680 CFQEVTP IY IFQ ++WWK Y CSV ++ YFCMLLSK+PVKSFSC+PF NSIMG Sbjct: 231 CFQEVTPEIYDIFQITNWWKVYRCSVIKDSHS-SGYFCMLLSKLPVKSFSCQPFPNSIMG 289 Query: 681 RELCVTEIEVKAGKSLVVATSHLESPCPAPPKWDQMYSKERVDQAKEALTSLKNSRNVVF 860 RELC+ +EV+ G SL VATSHLESPCPAPP W+QM+SKERV QAK+++ LK + NV+F Sbjct: 290 RELCIGNLEVQKGISLTVATSHLESPCPAPPTWNQMFSKERVVQAKQSVGFLKETPNVIF 349 Query: 861 GGDMNWDDKLDGKFPLLDGWVDAWAEQRPGEDGYTYDTKANPMLSGNRKLQKRLDRFCCS 1040 GGDMNWDDKLDG+FP DGW+DAW E RPGE+G+TYDTK+N MLSGNR LQKRLDRF C Sbjct: 350 GGDMNWDDKLDGRFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQKRLDRFICK 409 Query: 1041 LQDYKIGGIDMIGTEALPGLSYCKEKKVKNDVQKLTLPVLPSDHYGLILTIHS 1199 LQD+K+ I+MIGT+++PGLSY KEKKV D + L LPVLPSDHYGL+LTI S Sbjct: 410 LQDFKVNSIEMIGTDSIPGLSYTKEKKVGKDRKTLELPVLPSDHYGLLLTISS 462 >ref|XP_004153226.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Cucumis sativus] Length = 485 Score = 467 bits (1202), Expect = e-129 Identities = 234/413 (56%), Positives = 286/413 (69%), Gaps = 23/413 (5%) Frame = +3 Query: 30 SWSCSQCTYLNPPSQTXXXXXXXXXXXXXXXXXXXXX-------ACTFTNTGGNSNCEIC 188 SWSC +CT+LNP SQ ACTF N+ NS CE+C Sbjct: 73 SWSCKKCTFLNPSSQKAACKICLSPSSPPPSSSSSSTTPKWSCKACTFLNSFTNSECELC 132 Query: 189 GTTLPVSLISDCKEL-------DLGSSIGSMLLPFEPSNKRK---------EGDSESSVG 320 GT P +S K+L + SS+GS+ P +PS KRK G+ Sbjct: 133 GTRAPALSLSSFKDLIDVSEDENADSSVGSVFFPLQPSKKRKMDDPVPLESHGEYAELST 192 Query: 321 FRLPKIAKKKESLLEDNTQDAGLSTLKILTYNVWFREDLELSKRMKALGDLIEQHSPDVM 500 FR K + + + D++ A L T+KI+TYNVWFREDLEL RM+ALG LI++HSPDV+ Sbjct: 193 FRGTKASMNAVAEMGDSSSRACLKTVKIMTYNVWFREDLELRNRMRALGQLIQRHSPDVI 252 Query: 501 CFQEVTPNIYHIFQQSSWWKAYHCSVSTAMYNVKPYFCMLLSKVPVKSFSCKPFSNSIMG 680 CFQEVTP+IY IFQ ++WWK Y CSV ++ YFCMLLSK+PVKSFSC+PF NSIMG Sbjct: 253 CFQEVTPDIYDIFQITNWWKVYRCSVIKDSHS-SGYFCMLLSKLPVKSFSCQPFPNSIMG 311 Query: 681 RELCVTEIEVKAGKSLVVATSHLESPCPAPPKWDQMYSKERVDQAKEALTSLKNSRNVVF 860 RELC+ +EV+ G SL VATSHLESPCPAPP W+QM+SKERV QAK+++ LK + NV+F Sbjct: 312 RELCIGNLEVQKGISLTVATSHLESPCPAPPTWNQMFSKERVVQAKQSVGFLKETPNVIF 371 Query: 861 GGDMNWDDKLDGKFPLLDGWVDAWAEQRPGEDGYTYDTKANPMLSGNRKLQKRLDRFCCS 1040 GGDMNWDDKLDG+FP DGW+DAW E RPGE+G+TYDTK+N MLSGNR LQKRLDRF C Sbjct: 372 GGDMNWDDKLDGRFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQKRLDRFICK 431 Query: 1041 LQDYKIGGIDMIGTEALPGLSYCKEKKVKNDVQKLTLPVLPSDHYGLILTIHS 1199 LQD+K+ I+MIGT+++PGLSY KEKKV D + L LPVLPSDHYGL+LTI S Sbjct: 432 LQDFKVNSIEMIGTDSIPGLSYTKEKKVGKDRKTLELPVLPSDHYGLLLTISS 484 >ref|XP_004145179.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Cucumis sativus] Length = 482 Score = 467 bits (1202), Expect = e-129 Identities = 234/413 (56%), Positives = 286/413 (69%), Gaps = 23/413 (5%) Frame = +3 Query: 30 SWSCSQCTYLNPPSQTXXXXXXXXXXXXXXXXXXXXX-------ACTFTNTGGNSNCEIC 188 SWSC +CT+LNP SQ ACTF N+ NS CE+C Sbjct: 70 SWSCKKCTFLNPSSQKAACKICLSPSSPPPSSSSSSTTPKWSCKACTFLNSFTNSECELC 129 Query: 189 GTTLPVSLISDCKEL-------DLGSSIGSMLLPFEPSNKRK---------EGDSESSVG 320 GT P +S K+L + SS+GS+ P +PS KRK G+ Sbjct: 130 GTRAPALSLSSFKDLIDVSEDENADSSVGSVFFPLQPSKKRKMDDPVPLESHGEYAELST 189 Query: 321 FRLPKIAKKKESLLEDNTQDAGLSTLKILTYNVWFREDLELSKRMKALGDLIEQHSPDVM 500 FR K + + + D++ A L T+KI+TYNVWFREDLEL RM+ALG LI++HSPDV+ Sbjct: 190 FRGTKASMNAVAEMGDSSSRACLKTVKIMTYNVWFREDLELRNRMRALGQLIQRHSPDVI 249 Query: 501 CFQEVTPNIYHIFQQSSWWKAYHCSVSTAMYNVKPYFCMLLSKVPVKSFSCKPFSNSIMG 680 CFQEVTP+IY IFQ ++WWK Y CSV ++ YFCMLLSK+PVKSFSC+PF NSIMG Sbjct: 250 CFQEVTPDIYDIFQITNWWKVYRCSVIKDSHS-SGYFCMLLSKLPVKSFSCQPFPNSIMG 308 Query: 681 RELCVTEIEVKAGKSLVVATSHLESPCPAPPKWDQMYSKERVDQAKEALTSLKNSRNVVF 860 RELC+ +EV+ G SL VATSHLESPCPAPP W+QM+SKERV QAK+++ LK + NV+F Sbjct: 309 RELCIGNLEVQKGISLTVATSHLESPCPAPPTWNQMFSKERVVQAKQSVGFLKETPNVIF 368 Query: 861 GGDMNWDDKLDGKFPLLDGWVDAWAEQRPGEDGYTYDTKANPMLSGNRKLQKRLDRFCCS 1040 GGDMNWDDKLDG+FP DGW+DAW E RPGE+G+TYDTK+N MLSGNR LQKRLDRF C Sbjct: 369 GGDMNWDDKLDGRFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQKRLDRFICK 428 Query: 1041 LQDYKIGGIDMIGTEALPGLSYCKEKKVKNDVQKLTLPVLPSDHYGLILTIHS 1199 LQD+K+ I+MIGT+++PGLSY KEKKV D + L LPVLPSDHYGL+LTI S Sbjct: 429 LQDFKVNSIEMIGTDSIPGLSYTKEKKVGKDRKTLELPVLPSDHYGLLLTISS 481