BLASTX nr result

ID: Coptis24_contig00005364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005364
         (1261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276733.1| PREDICTED: uncharacterized protein LOC100266...   346   8e-93
ref|XP_002528624.1| conserved hypothetical protein [Ricinus comm...   327   5e-87
emb|CBI23881.3| unnamed protein product [Vitis vinifera]              319   8e-85
dbj|BAE48661.1| Pm27 [Prunus mume]                                    316   7e-84
ref|XP_002299676.1| predicted protein [Populus trichocarpa] gi|2...   310   5e-82

>ref|XP_002276733.1| PREDICTED: uncharacterized protein LOC100266910 [Vitis vinifera]
          Length = 363

 Score =  346 bits (887), Expect = 8e-93
 Identities = 174/268 (64%), Positives = 195/268 (72%), Gaps = 6/268 (2%)
 Frame = +2

Query: 29  IVSRQCR*TPYQLPSCNCQVLDKDVHLKKCTKALEKADWEDATCSVCLEYPHNAVLLLCS 208
           I SRQ R TPY LPS N Q + ++++ KKC K+LEK DWEDATCSVC+EYPHNAVLLLCS
Sbjct: 11  IASRQFRPTPYPLPSGN-QDVSEEIYSKKCCKSLEKKDWEDATCSVCMEYPHNAVLLLCS 69

Query: 209 SHDKGCCPYMCATSYRYSNCLDQYEKAYKKEAPAYQGQPWHGSADYSVAG--SDWPAKKC 382
           SHDKGC PYMC TS+RYSNCLDQY+KAY K      GQ   GS D  +    S+WP +KC
Sbjct: 70  SHDKGCRPYMCGTSFRYSNCLDQYKKAYTKVTSTNPGQSLDGSVDNPIMNPVSNWPVEKC 129

Query: 383 EGLELACPLCRGQVKGWTVVEAARKYLNAKKRTCMQDKCSFAGTYKQLRKHVKQEHPSAR 562
           E  ELACPLCRGQVKGWTVVE AR+YLNAKKR+CMQD CSF G YK+LRKHV+ EHPSA+
Sbjct: 130 EVTELACPLCRGQVKGWTVVEPAREYLNAKKRSCMQDNCSFVGNYKELRKHVRAEHPSAQ 189

Query: 563 PRELDPILEQKWETLEDERARDDAISTIRSSMPGAMVLGDYVIERNHHXXXXXXXXXXXX 742
           PRE+DPILEQKW  LE ER RDD ISTIRSSMPGAMV GDYVIE NH+            
Sbjct: 190 PREVDPILEQKWRRLERERERDDVISTIRSSMPGAMVFGDYVIEGNHYDFDSDEGEHFDA 249

Query: 743 XXXXXMD--NVG--HNFMNVVLLFEAFG 814
                 +   VG   N +NV LL  AFG
Sbjct: 250 DAVERNEGFEVGFDSNLVNVFLLLHAFG 277


>ref|XP_002528624.1| conserved hypothetical protein [Ricinus communis]
           gi|223531969|gb|EEF33782.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 358

 Score =  327 bits (837), Expect = 5e-87
 Identities = 165/267 (61%), Positives = 191/267 (71%), Gaps = 7/267 (2%)
 Frame = +2

Query: 35  SRQCR*TPYQLPSCNCQVLDKDVHLKKCTKALEKADWEDATCSVCLEYPHNAVLLLCSSH 214
           SRQCR  PY LPSC+  V  +D++LKK +K  +K DWED TCSVC+E PHNAVLLLCSSH
Sbjct: 13  SRQCRLAPYPLPSCDRDV-SEDLYLKKSSKMFDKKDWEDVTCSVCMECPHNAVLLLCSSH 71

Query: 215 DKGCCPYMCATSYRYSNCLDQYEKAYKKEAPAYQGQPWHGSADYSVAGSD--WPAKKCEG 388
           DKGC PYMC TS+RYSNCLDQY+KAY K   +      +G+AD S+  SD  WP  KCE 
Sbjct: 72  DKGCRPYMCGTSFRYSNCLDQYKKAYTKVTSS------NGTADNSILLSDSGWPVDKCEV 125

Query: 389 LELACPLCRGQVKGWTVVEAARKYLNAKKRTCMQDKCSFAGTYKQLRKHVKQEHPSARPR 568
            ELACPLCRGQVKGWTVVE AR YLNAK+R+CMQD CSF GT+K+LRKH++  HPSARPR
Sbjct: 126 TELACPLCRGQVKGWTVVEPARDYLNAKRRSCMQDDCSFVGTFKELRKHMRTAHPSARPR 185

Query: 569 ELDPILEQKWETLEDERARDDAISTIRSSMPGAMVLGDYVIERNHHXXXXXXXXXXXXXX 748
           E+DP+LEQKW  LE ER  DD ISTIRS+MPGAMV GDYVIE N+H              
Sbjct: 186 EVDPMLEQKWRRLEREREHDDVISTIRSTMPGAMVFGDYVIEGNNHGFDSDEENGGFDAD 245

Query: 749 XXXMD---NVG--HNFMNVVLLFEAFG 814
               +   +VG   N +NV LL  AFG
Sbjct: 246 AAERNGGLDVGFDRNLVNVFLLLHAFG 272


>emb|CBI23881.3| unnamed protein product [Vitis vinifera]
          Length = 246

 Score =  319 bits (818), Expect = 8e-85
 Identities = 156/226 (69%), Positives = 172/226 (76%)
 Frame = +2

Query: 29  IVSRQCR*TPYQLPSCNCQVLDKDVHLKKCTKALEKADWEDATCSVCLEYPHNAVLLLCS 208
           I SRQ R TPY LPS N Q + ++++ KKC K+LEK DWEDATCSVC+EYPHNAVLLLCS
Sbjct: 11  IASRQFRPTPYPLPSGN-QDVSEEIYSKKCCKSLEKKDWEDATCSVCMEYPHNAVLLLCS 69

Query: 209 SHDKGCCPYMCATSYRYSNCLDQYEKAYKKEAPAYQGQPWHGSADYSVAGSDWPAKKCEG 388
           SHDKGC PYMC TS+RYSNCLDQY+KAY                           KKCE 
Sbjct: 70  SHDKGCRPYMCGTSFRYSNCLDQYKKAY--------------------------TKKCEV 103

Query: 389 LELACPLCRGQVKGWTVVEAARKYLNAKKRTCMQDKCSFAGTYKQLRKHVKQEHPSARPR 568
            ELACPLCRGQVKGWTVVE AR+YLNAKKR+CMQD CSF G YK+LRKHV+ EHPSA+PR
Sbjct: 104 TELACPLCRGQVKGWTVVEPAREYLNAKKRSCMQDNCSFVGNYKELRKHVRAEHPSAQPR 163

Query: 569 ELDPILEQKWETLEDERARDDAISTIRSSMPGAMVLGDYVIERNHH 706
           E+DPILEQKW  LE ER RDD ISTIRSSMPGAMV GDYVIE NH+
Sbjct: 164 EVDPILEQKWRRLERERERDDVISTIRSSMPGAMVFGDYVIEGNHY 209


>dbj|BAE48661.1| Pm27 [Prunus mume]
          Length = 362

 Score =  316 bits (810), Expect = 7e-84
 Identities = 152/228 (66%), Positives = 181/228 (79%), Gaps = 2/228 (0%)
 Frame = +2

Query: 29  IVSRQCR*TPYQLPSCNCQVLDKDVHLKKCTKALEKADWEDATCSVCLEYPHNAVLLLCS 208
           I SR+ R TPY L S N  +L+ D+  KKC++ LEK DW+DATCSVC+EYPHNAVLLLCS
Sbjct: 11  IASRRYRPTPYPLRS-NQDILE-DLCPKKCSRDLEKKDWDDATCSVCMEYPHNAVLLLCS 68

Query: 209 SHDKGCCPYMCATSYRYSNCLDQYEKAYKKEAPAYQGQPWHGSADYSVA--GSDWPAKKC 382
           SHDKGC PYMC TS+R+SNCL QY+KAY K   +  GQP  GS +  +    S+WPA+KC
Sbjct: 69  SHDKGCRPYMCGTSFRHSNCLGQYKKAYTKMVSSDHGQPLLGSDNNPIVLPDSEWPAQKC 128

Query: 383 EGLELACPLCRGQVKGWTVVEAARKYLNAKKRTCMQDKCSFAGTYKQLRKHVKQEHPSAR 562
           E  ELACPLCRG+VKGWTV+E AR YLNAKKR+CMQ+ CSF G YK+L++HV+ EHPSAR
Sbjct: 129 EVSELACPLCRGKVKGWTVLEPARDYLNAKKRSCMQENCSFVGNYKELKRHVRAEHPSAR 188

Query: 563 PRELDPILEQKWETLEDERARDDAISTIRSSMPGAMVLGDYVIERNHH 706
           PRE+DP+LEQKW  LE ER  DD ISTI+SSMPGAMV GDYVIE N++
Sbjct: 189 PREVDPVLEQKWRRLEHERETDDVISTIQSSMPGAMVFGDYVIEGNNY 236


>ref|XP_002299676.1| predicted protein [Populus trichocarpa] gi|222846934|gb|EEE84481.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  310 bits (794), Expect = 5e-82
 Identities = 155/266 (58%), Positives = 179/266 (67%), Gaps = 4/266 (1%)
 Frame = +2

Query: 29  IVSRQCR*TPYQLPSCNCQVLDKDVHLKKCTKALEKADWEDATCSVCLEYPHNAVLLLCS 208
           I S+QCR  PY LP  N Q +  D   KKC+K L+K DWE+ TCSVC+E PHNAVLLLCS
Sbjct: 11  IASQQCRQAPYSLPGYN-QHIATDPCSKKCSKILDKKDWENVTCSVCMECPHNAVLLLCS 69

Query: 209 SHDKGCCPYMCATSYRYSNCLDQYEKAYKKEAPAYQGQPWHGSADYSVAGSDWPAKKCEG 388
           SHDKGC PYMC TS+RYSNCLDQY+KAY K   + +           V+ S WP  KCE 
Sbjct: 70  SHDKGCRPYMCGTSFRYSNCLDQYKKAYTKSISSTRA----ADNPILVSDSSWPVDKCEA 125

Query: 389 LELACPLCRGQVKGWTVVEAARKYLNAKKRTCMQDKCSFAGTYKQLRKHVKQEHPSARPR 568
            ELACP CRGQVKGWTVVE AR+YLNAK+R+CMQD CSF GTYK+LRKH++  HPSA+PR
Sbjct: 126 TELACPFCRGQVKGWTVVEHAREYLNAKRRSCMQDDCSFVGTYKELRKHMRANHPSAQPR 185

Query: 569 ELDPILEQKWETLEDERARDDAISTIRSSMPGAMVLGDYVIERNHHXXXXXXXXXXXXXX 748
            +DPILEQKW  LE E   DD ISTIRS+MPGAMV GDYVIE +H+              
Sbjct: 186 AVDPILEQKWRGLEGEFEHDDVISTIRSTMPGAMVFGDYVIEGSHNGFDTDEDGGFDADA 245

Query: 749 XXXMD----NVGHNFMNVVLLFEAFG 814
                        N +NV LL+ AFG
Sbjct: 246 AERNGGFDMGFNQNLVNVFLLWHAFG 271


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