BLASTX nr result
ID: Coptis24_contig00005349
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005349
(3208 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264162.1| PREDICTED: uncharacterized protein LOC100261... 221 1e-54
emb|CAN70065.1| hypothetical protein VITISV_015730 [Vitis vinifera] 215 7e-53
emb|CBI24989.3| unnamed protein product [Vitis vinifera] 208 7e-51
ref|XP_002310979.1| predicted protein [Populus trichocarpa] gi|2... 176 5e-41
ref|XP_002315412.1| predicted protein [Populus trichocarpa] gi|2... 173 3e-40
>ref|XP_002264162.1| PREDICTED: uncharacterized protein LOC100261025 [Vitis vinifera]
Length = 1285
Score = 221 bits (562), Expect = 1e-54
Identities = 176/489 (35%), Positives = 248/489 (50%), Gaps = 52/489 (10%)
Frame = +3
Query: 12 PVQVNE------LKKMNSSF--LEENVSSPVELAKAYMG-RPSKVTPSTLGLHNQASRGD 164
PVQ NE L+ +++ LEE+V+SP ELAKAYMG RPSKV+PS L L QA R D
Sbjct: 187 PVQENETESHRFLEAVSTPIRVLEEDVASPAELAKAYMGSRPSKVSPSMLSLRGQAFRED 246
Query: 165 VSRGTTIPFSPMSHSRSLVPAPVHNASVSKVYDSGYLTPVPRGRSAVYSMAHTPSSRFHQ 344
+ + I P S+VP VS ++G++ P RGRSA+YSMA TP SR +
Sbjct: 247 STLPSNISLHPKLPIMSIVPKSPAPVGVS---ENGFMIPRSRGRSALYSMARTPYSRVNP 303
Query: 345 TASLKGVQSMTEGNAGPSTSSRRSWEANLLNGAKQA-SKRRISVLDSDIGSVDSIRRTRR 521
T ++KGV S + GPS+S S E N +G+KQ KRR SVLDSDIGSV IRR R+
Sbjct: 304 TTTIKGVTSTLDVYGGPSSSQSAS-EQNRFSGSKQGLLKRRSSVLDSDIGSVGPIRRIRQ 362
Query: 522 KTNMMSPSDSLGLSIHRSSLPISSALIGTDATKGHLSSVQNQLRLDGHKHNASSRALVQN 701
K N++SP SLG ++ S L + + +D + LS ++ RL G + S+ L++N
Sbjct: 363 KPNLLSPK-SLGTAVGGSPLSATGTGVRSDVAQLPLSLIEKP-RLLGESKHKFSKTLIEN 420
Query: 702 GKSSIASKRFVSVPSHSTEMANKILQQLDKLVPSPKEKSYERKTATLMETSPSKLTDGGA 881
G +S+ F VPS S+EMA KIL+QLDKL PSPKEKS E K A E SP+KLT
Sbjct: 421 GYNSVPGISFAHVPSQSSEMAEKILEQLDKLAPSPKEKSSELKLAAAREKSPAKLTPTML 480
Query: 882 GDFMSRKQARVDGTHL-------KHISDLEEKVGPES----------------------- 971
+ VD + + +SD+ P++
Sbjct: 481 RGQALKSLENVDSSKILENVPNNNKLSDMLTACVPDARDSTFQKPDKVQNGPTKFFDGSI 540
Query: 972 ---SGLVTTRLKYETTSSLNTAIVA-SSSSLERFSQKKQGFEEIANKDSPELEKNKLSSR 1139
+ + TT T S+ TA A +S++ +QKK+ F+ A++ EL+ + +
Sbjct: 541 SVVNNVDTTTSSKGTMPSVKTADSAMMNSAIHPPTQKKRAFQMSAHEVYLELDDDFYPNG 600
Query: 1140 IGCNPSVVS--------VKDKKDTPVVESKEIVDGTVTVGNPPGIFTVKKSRDTGASDNY 1295
+ NP V S V K +T VES + +++ P + KS S+ +
Sbjct: 601 LASNPLVESREKLDKSLVDRKMETVAVESVKAEKPSISSEKSPSSSVLNKSSYAETSETH 660
Query: 1296 RAIEKEVGF 1322
EK F
Sbjct: 661 VVAEKNPSF 669
Score = 83.2 bits (204), Expect = 4e-13
Identities = 93/329 (28%), Positives = 119/329 (36%), Gaps = 23/329 (6%)
Frame = +3
Query: 2001 NLKSSPIGSTTPAFAGSSNGKFVFGDPSSLLTNLXXXXXXXXXXXXXXXXXXXXXXXXXX 2180
N + +G T+ A + +G F F SS T
Sbjct: 958 NANNQSLGGTSSKIASTGSGIFGFSGSSSSST-ANNQSLGPTPFGAGSGSLLSAQTSSSP 1016
Query: 2181 PGTVSAPFTQSVPNQLDSFTSSKASVFSTGGSP----FASSVPGANLFAXXXXXXXXXXX 2348
GT A TQS+P Q TSS + TG +P F SS P +
Sbjct: 1017 AGTGIASSTQSMPIQFGLSTSSSFGM--TGAAPLNSLFGSSTPAKLFGSSSSGLSSSVSL 1074
Query: 2349 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFG---TGFNFGSSSAVXXXXXXXXXXXXXX 2519
+FG TGF FG SSA
Sbjct: 1075 SEVSTSLSSTSGITSNVFSSNWPPTTKSPIFGSTSTGFPFGGSSASVAGSNSAPMVFGSS 1134
Query: 2520 XXXXXXXXXXFTSAA---PVTTAPMSR-----------FGSASPGNDQM-IEDSMTEDTV 2654
F +A +++ P S+ FGSA+ +DQM +EDSM EDTV
Sbjct: 1135 TSASSANMFSFNPSAGTASLSSFPSSQPVFGNANSVFPFGSATGNHDQMNMEDSMAEDTV 1194
Query: 2655 QASTALASGFAQPTIPPQAN-SFAFTTPSSGGLPLFQFGSQQNPATPQTLSPFQPPXXXX 2831
QAST S Q I P + +F F + +S G FQFGSQQNPATPQ+ SPFQ
Sbjct: 1195 QASTPAVSVLGQQAISPSPSPAFMFNSTASSGANPFQFGSQQNPATPQSPSPFQTSSSLD 1254
Query: 2832 XXXXXXXXXXXXXXVDKSNRRIFKARRKR 2918
DK+NRR+ K + R
Sbjct: 1255 FNAGGSFSLGTGGG-DKANRRMVKVKHPR 1282
>emb|CAN70065.1| hypothetical protein VITISV_015730 [Vitis vinifera]
Length = 1389
Score = 215 bits (547), Expect = 7e-53
Identities = 165/440 (37%), Positives = 230/440 (52%), Gaps = 44/440 (10%)
Frame = +3
Query: 12 PVQVNELKKMNS--------SFLEENVSSPVELAKAYMG-RPSKVTPSTLGLHNQASRGD 164
PVQ NE + LEE+V+SP ELAKAYMG RPSKV+PS L L QA R D
Sbjct: 288 PVQENETESXRXLEAVSTPIRVLEEDVASPAELAKAYMGSRPSKVSPSMLSLRGQAFRED 347
Query: 165 VSRGTTIPFSPMSHSRSLVPAPVHNASVSKVYDSGYLTPVPRGRSAVYSMAHTPSSRFHQ 344
+ + I P S+VP VS ++G++ P RGRSA+YSMA TP SR +
Sbjct: 348 STLPSNISLHPKLPIMSIVPKSPAPVGVS---ENGFMIPRSRGRSALYSMARTPYSRVNP 404
Query: 345 TASLKGVQSMTEGNAGPSTSSRRSWEANLLNGAKQA-SKRRISVLDSDIGSVDSIRRTRR 521
T ++KGV S + GPS+S S E N +G+KQ KRR SVLDSDIGSV IRR R+
Sbjct: 405 TTTIKGVTSTLDVYGGPSSSQSAS-EQNRFSGSKQGLLKRRSSVLDSDIGSVGPIRRIRQ 463
Query: 522 KTNMMSPSDSLGLSIHRSSLPISSALIGTDATKGHLSSVQNQLRLDGHKHNASSRALVQN 701
K N++SP SLG ++ S L + + +D + LS ++ RL G + S+ L++N
Sbjct: 464 KPNLLSPK-SLGTAVGGSPLSATGTGVRSDVAQLPLSLIEKP-RLLGESKHKFSKTLIEN 521
Query: 702 GKSSIASKRFVSVPSHSTEMANKILQQLDKLVPSPKEKSYERKTATLMETSPSKLTDGGA 881
G +S+ F VPS S+EMA KIL+QLDKL PSPKEKS E K A E SP+KLT
Sbjct: 522 GYNSVPGISFAHVPSQSSEMAEKILEQLDKLAPSPKEKSSELKLAAAREKSPAKLTPTML 581
Query: 882 GDFMSRKQARVDGTHL-------KHISDLEEKVGPES----------------------- 971
+ VD + + +SD+ P++
Sbjct: 582 RGQALKSLENVDSSKILENVPNNNKLSDMLTACVPDARDSTFQKPDKVQNGPTKFFDGSI 641
Query: 972 ---SGLVTTRLKYETTSSLNTAIVA-SSSSLERFSQKKQGFEEIANKDSPELEKNKLSSR 1139
+ + TT T S+ TA A +S++ +QKK+ F+ A++ EL+ + +
Sbjct: 642 SVVNNVDTTTSSKGTMPSVKTADSAMMNSAIHPPTQKKRAFQMSAHEVYLELDDDFYPNG 701
Query: 1140 IGCNPSVVSVKDKKDTPVVE 1199
+ NP V S ++K D +V+
Sbjct: 702 LASNPLVES-REKLDKSLVD 720
Score = 85.1 bits (209), Expect = 1e-13
Identities = 86/268 (32%), Positives = 106/268 (39%), Gaps = 23/268 (8%)
Frame = +3
Query: 2184 GTVSAPFTQSVPNQLDSFTSSKASVFSTGGSP----FASSVPGANLFAXXXXXXXXXXXX 2351
GT A TQS+P Q TSS + TG +P F SS P A LF
Sbjct: 1123 GTGIASSTQSMPIQFGLSTSSPFGM--TGAAPLNSLFGSSTP-AKLFGSSSSGLSSSVSL 1179
Query: 2352 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFG---TGFNFGSSSAVXXXXXXXXXXXXXXX 2522
+FG TGF FG SSA
Sbjct: 1180 SEASTSLSSTSGITSNVFSSNWPTTKSPIFGSTSTGFPFGGSSASVAGSNSAPMVFGSST 1239
Query: 2523 XXXXXXXXXFTSAA---PVTTAPMSR-----------FGSASPGNDQM-IEDSMTEDTVQ 2657
F +A +++ P S+ FGSA+ +DQM +EDSM EDTVQ
Sbjct: 1240 SASSANMFSFNPSAGTASLSSFPSSQPVFGNANSVFPFGSATGNHDQMNMEDSMAEDTVQ 1299
Query: 2658 ASTALASGFAQPTIPPQAN-SFAFTTPSSGGLPLFQFGSQQNPATPQTLSPFQPPXXXXX 2834
AST S Q I P + +F F + +S G FQFGSQQNPATPQ+ SPFQ
Sbjct: 1300 ASTPAVSVLGQQAISPSPSPAFMFNSTASSGANPFQFGSQQNPATPQSPSPFQASSSLDF 1359
Query: 2835 XXXXXXXXXXXXXVDKSNRRIFKARRKR 2918
DK+NRR+ K + R
Sbjct: 1360 NAGGSFSLGTGGG-DKANRRMVKVKHPR 1386
>emb|CBI24989.3| unnamed protein product [Vitis vinifera]
Length = 1196
Score = 208 bits (530), Expect = 7e-51
Identities = 176/489 (35%), Positives = 243/489 (49%), Gaps = 52/489 (10%)
Frame = +3
Query: 12 PVQVNE------LKKMNSSF--LEENVSSPVELAKAYMG-RPSKVTPSTLGLHNQASRGD 164
PVQ NE L+ +++ LEE+V+SP ELAKAYMG RPSKV+PS L L QA R D
Sbjct: 121 PVQENETESHRFLEAVSTPIRVLEEDVASPAELAKAYMGSRPSKVSPSMLSLRGQAFRED 180
Query: 165 VSRGTTIPFSPMSHSRSLVPAPVHNASVSKVYDSGYLTPVPRGRSAVYSMAHTPSSRFHQ 344
+ + I P S+VP VS ++G++ P RGRSA+YSMA TP SR +
Sbjct: 181 STLPSNISLHPKLPIMSIVPKSPAPVGVS---ENGFMIPRSRGRSALYSMARTPYSRVNP 237
Query: 345 TASLKGVQSMTEGNAGPSTSSRRSWEANLLNGAKQA-SKRRISVLDSDIGSVDSIRRTRR 521
T ++KGV S + GPS+S S E N +G+KQ KRR SVLDSDIGSV IRR R+
Sbjct: 238 TTTIKGVTSTLDVYGGPSSSQSAS-EQNRFSGSKQGLLKRRSSVLDSDIGSVGPIRRIRQ 296
Query: 522 KTNMMSPSDSLGLSIHRSSLPISSALIGTDATKGHLSSVQNQLRLDGHKHNASSRALVQN 701
K N++SP SLG ++ S P+S+ GT GHK S+ L++N
Sbjct: 297 KPNLLSPK-SLGTAVGGS--PLSAT--GT-----------------GHKF---SKTLIEN 331
Query: 702 GKSSIASKRFVSVPSHSTEMANKILQQLDKLVPSPKEKSYERKTATLMETSPSKLTDGGA 881
G +S+ F VPS S+EMA KIL+QLDKL PSPKEKS E K A E SP+KLT
Sbjct: 332 GYNSVPGISFAHVPSQSSEMAEKILEQLDKLAPSPKEKSSELKLAAAREKSPAKLTPTML 391
Query: 882 GDFMSRKQARVDGTHL-------KHISDLEEKVGPES----------------------- 971
+ VD + + +SD+ P++
Sbjct: 392 RGQALKSLENVDSSKILENVPNNNKLSDMLTACVPDARDSTFQKPDKVQNGPTKFFDGSI 451
Query: 972 ---SGLVTTRLKYETTSSLNTAIVA-SSSSLERFSQKKQGFEEIANKDSPELEKNKLSSR 1139
+ + TT T S+ TA A +S++ +QKK+ F+ A++ EL+ + +
Sbjct: 452 SVVNNVDTTTSSKGTMPSVKTADSAMMNSAIHPPTQKKRAFQMSAHEVYLELDDDFYPNG 511
Query: 1140 IGCNPSVVS--------VKDKKDTPVVESKEIVDGTVTVGNPPGIFTVKKSRDTGASDNY 1295
+ NP V S V K +T VES + +++ P + KS S+ +
Sbjct: 512 LASNPLVESREKLDKSLVDRKMETVAVESVKAEKPSISSEKSPSSSVLNKSSYAETSETH 571
Query: 1296 RAIEKEVGF 1322
EK F
Sbjct: 572 VVAEKNPSF 580
Score = 83.2 bits (204), Expect = 4e-13
Identities = 93/329 (28%), Positives = 119/329 (36%), Gaps = 23/329 (6%)
Frame = +3
Query: 2001 NLKSSPIGSTTPAFAGSSNGKFVFGDPSSLLTNLXXXXXXXXXXXXXXXXXXXXXXXXXX 2180
N + +G T+ A + +G F F SS T
Sbjct: 869 NANNQSLGGTSSKIASTGSGIFGFSGSSSSST-ANNQSLGPTPFGAGSGSLLSAQTSSSP 927
Query: 2181 PGTVSAPFTQSVPNQLDSFTSSKASVFSTGGSP----FASSVPGANLFAXXXXXXXXXXX 2348
GT A TQS+P Q TSS + TG +P F SS P +
Sbjct: 928 AGTGIASSTQSMPIQFGLSTSSSFGM--TGAAPLNSLFGSSTPAKLFGSSSSGLSSSVSL 985
Query: 2349 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFG---TGFNFGSSSAVXXXXXXXXXXXXXX 2519
+FG TGF FG SSA
Sbjct: 986 SEVSTSLSSTSGITSNVFSSNWPPTTKSPIFGSTSTGFPFGGSSASVAGSNSAPMVFGSS 1045
Query: 2520 XXXXXXXXXXFTSAA---PVTTAPMSR-----------FGSASPGNDQM-IEDSMTEDTV 2654
F +A +++ P S+ FGSA+ +DQM +EDSM EDTV
Sbjct: 1046 TSASSANMFSFNPSAGTASLSSFPSSQPVFGNANSVFPFGSATGNHDQMNMEDSMAEDTV 1105
Query: 2655 QASTALASGFAQPTIPPQAN-SFAFTTPSSGGLPLFQFGSQQNPATPQTLSPFQPPXXXX 2831
QAST S Q I P + +F F + +S G FQFGSQQNPATPQ+ SPFQ
Sbjct: 1106 QASTPAVSVLGQQAISPSPSPAFMFNSTASSGANPFQFGSQQNPATPQSPSPFQTSSSLD 1165
Query: 2832 XXXXXXXXXXXXXXVDKSNRRIFKARRKR 2918
DK+NRR+ K + R
Sbjct: 1166 FNAGGSFSLGTGGG-DKANRRMVKVKHPR 1193
>ref|XP_002310979.1| predicted protein [Populus trichocarpa] gi|222850799|gb|EEE88346.1|
predicted protein [Populus trichocarpa]
Length = 717
Score = 176 bits (445), Expect = 5e-41
Identities = 153/470 (32%), Positives = 234/470 (49%), Gaps = 35/470 (7%)
Frame = +3
Query: 18 QVNELKKMNSSFLEENVSSPVELAKAYMG-RPSKVTPSTLGLHNQASRGDVSRGTTIPFS 194
++N + SS + E+V+SP ELAKAYMG RPSKV+PS L Q R + + F+
Sbjct: 169 RINSTPIVCSSVVNEDVASPTELAKAYMGSRPSKVSPSMLESRCQPFRDNSTALINHTFT 228
Query: 195 PMSHSRSLVPAPVHNASVSKVYDSGYLTPVPRGRSAVYSMAHTPSSRFHQTASLKGVQSM 374
P S SL P ++ V ++ ++TP RGRSA+Y+MA TP SR H + L+G +
Sbjct: 229 PKSPMMSLTP---RSSGCPGVPENYFVTPRSRGRSAIYNMARTPYSRVHASTRLQGAGTS 285
Query: 375 TEGNAGPSTSSRRSWEANLLNGAKQ-ASKRRISVLDSDIGSVDSIRRTRRKTNMMSPSDS 551
++ AGPS SS+ + E++ +G+KQ A KRR SVLD+DIGSV IRR R+K+N++ S
Sbjct: 286 SDAFAGPSFSSQNALESSRFSGSKQGALKRRSSVLDNDIGSVGPIRRIRQKSNLLPTS-- 343
Query: 552 LGLSIHRSSLPISSALIGTDATKGHLSSVQNQLRLDGHKHNASSRALVQNGKSSIASKRF 731
+L I A IG++A + S+ + L + K NG +++ F
Sbjct: 344 -------GTLSIRGAGIGSNAAQKLPSTEKPVLVGEPSK---------DNGDNNVHGTTF 387
Query: 732 VSVPSHSTEMANKILQQLDKLVPSPKEKSYERKTATLMETSPSKLTDGGAGDFM-----S 896
VPS S+EMA+KIL QLD LV S ++ + + L + L + + F+ +
Sbjct: 388 TPVPSKSSEMASKILHQLDVLVSSREKSPAKLSPSMLRGPALRSLENVDSSKFVEIDNDT 447
Query: 897 RKQARVDGTHL----KHISDLEEKV---GPE------------SSGLVTTR-LKYETTSS 1016
K A T L + +S ++K+ GP +G+ TT LK +
Sbjct: 448 NKLALKHDTLLPDARESVSQKQDKIEEKGPSKPIAPCGKSALAGNGMDTTSLLKNDLAGV 507
Query: 1017 LNTAIVASSSSLERFSQKKQGFEEIANKDSPELEKNKLSSRIGCNPSVVSVKDKKDTPVV 1196
+A S+ + QKK+ F+ A +D EL+ + S+ + + ++K DT +V
Sbjct: 508 KTSAFPVMSTFAQAPVQKKRAFQMSAQEDFLELDDDDYSNGT-ASGMLAEGREKVDTKLV 566
Query: 1197 ESKEIVDGTVTVG--------NPPGIFTVKKSRDTGASDNYRAIEKEVGF 1322
E K IV V V N P +T+ K D +EK +GF
Sbjct: 567 EKKTIVAEAVVVEKSPVQSEVNSPSSYTLNKK--NAGIDGSVVVEKSIGF 614
>ref|XP_002315412.1| predicted protein [Populus trichocarpa] gi|222864452|gb|EEF01583.1|
predicted protein [Populus trichocarpa]
Length = 1309
Score = 173 bits (438), Expect = 3e-40
Identities = 142/453 (31%), Positives = 219/453 (48%), Gaps = 32/453 (7%)
Frame = +3
Query: 54 LEENVSSPVELAKAYM-GRPSKVTPSTLGLHNQASRGDVSRGTTIPFSPMSHSRSLVPAP 230
LEE+V SP ELAK+YM RP KV+PS L +QA R + + T F+P S S+ P
Sbjct: 235 LEEDVGSPTELAKSYMRSRPLKVSPSMLESQSQALRENPTVLTNHTFTPKSPMISIAPRS 294
Query: 231 VHNASVSKVYDSGYLTPVPRGRSAVYSMAHTPSSRFHQTASLKGVQSMTEGNAGPSTSSR 410
+A ++G+ TP RGR A+YSM TP SR H T L+G ++ ++ AGPS+S +
Sbjct: 295 SGHAEFP---ENGFATPRSRGRFAIYSMTRTPYSRVHATTGLQGTRTASDAFAGPSSSFQ 351
Query: 411 RSWEANLLNGAKQ-ASKRRISVLDSDIGSVDSIRRTRRKTNMMSPSDSLGLSIHRSSLPI 587
+WE N +G+KQ ASKRR SVLD+D+GSV IRR R+K+N++ S +L + R + +
Sbjct: 352 NAWENNGFSGSKQGASKRRSSVLDNDMGSVGPIRRIRQKSNLLPMSGTLSI---RGNGMV 408
Query: 588 SSALIGTDATKGHLSSVQNQLRLDGHKHNASSRALVQNGKSSIASKRFVSVPSHSTEMAN 767
S+A +T+ K + L N S++ F VPS S+EMA+
Sbjct: 409 SNAARRLTSTE---------------KPVLAGEPLKDNANSNVHGTTFTPVPSKSSEMAS 453
Query: 768 KILQQLDKLVPSPKEKSYERKTATLMETSPSKLTDGGAGDFMSRKQARVDGTHLK----- 932
KILQQLD LV S +EKS R + +++ + + DF S K + + K
Sbjct: 454 KILQQLDVLV-SSREKSPARLSPSMLRGQALRSLE----DFDSSKLLEIVNDNNKLDAKP 508
Query: 933 ------------HISDLEEKVGPESSGL-------------VTTRLKYETTSSLNTAIVA 1037
+ D E+ GP S L T+ +K + TA
Sbjct: 509 NTSLPDARESVFKMKDKIEENGPSKSILPYDKSASAVNGMGATSSMKNDVAGVKTTAFPV 568
Query: 1038 SSSSLERFSQKKQGFEEIANKDSPELEKNKLSSRIGCNPSVVSVKDKKDTPVVESKEIVD 1217
+S+ ++ QKK+ F+ A++D EL+ + + + ++K + +VE K I
Sbjct: 569 TSTIVQSPQQKKRAFQMSAHEDFLELDDDDDYLNRTVSGMLAEGREKIGSELVERKTIGA 628
Query: 1218 GTVTVGNPPGIFTVKKSRDTGASDNYRAIEKEV 1316
+ + P + V + + I+ V
Sbjct: 629 EAIVLEKSPALSEVNSPSTSTLNQKNAGIDGSV 661