BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005345
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298497.1| predicted protein [Populus trichocarpa] gi|2...   257   4e-66
ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261...   243   8e-62
ref|XP_002521188.1| RNA binding protein, putative [Ricinus commu...   242   2e-61
gb|EEE53925.1| hypothetical protein OsJ_00494 [Oryza sativa Japo...   233   8e-59
gb|EEC69997.1| hypothetical protein OsI_00526 [Oryza sativa Indi...   233   8e-59

>ref|XP_002298497.1| predicted protein [Populus trichocarpa] gi|222845755|gb|EEE83302.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  257 bits (657), Expect = 4e-66
 Identities = 134/263 (50%), Positives = 154/263 (58%), Gaps = 22/263 (8%)
 Frame = +1

Query: 82  PPANPSYGGAGGNYPPPSNAYGGT----------------------PSYGGDNAVXXXXX 195
           PP+ PSYGG GGNYPP  N+YGG                       PSYGG  +      
Sbjct: 143 PPSLPSYGGGGGNYPPAPNSYGGNANYGMEAVPPPTSYTGGPTSYPPSYGGPASGYGGDA 202

Query: 196 XXXXXXXXXXXXXXXXXXXXXXXXXXRNSGSGYGGSPAEVPAEKVKQCDENCGDTCDNAR 375
                                        GSGYG +PA+ PA K+KQCD+NCGDTCDNAR
Sbjct: 203 TGEVRSGGRGGQPGGYEGGRGGGGSRNQGGSGYGAAPADAPA-KIKQCDDNCGDTCDNAR 261

Query: 376 IYISNLPADVTTDELQELFSGIGQVARIKQKRGYKDQWPYSIKIYTDDSGKSKGDAVLSY 555
           IYISNLP DVT +EL+ELF GIGQV RIKQKRGYKDQWP++IKIYTD++G +KGDA L+Y
Sbjct: 262 IYISNLPPDVTIEELRELFGGIGQVGRIKQKRGYKDQWPWNIKIYTDENGNNKGDACLAY 321

Query: 556 EDPSAAHSAGGFFNNYELRGHKITVGMAEKSAPRPPSNFXXXXXXXXXXXXXXXXXXXXX 735
           EDPSAAHSAGGF+NNY+ RG+KI V MAEKSAPR P++                      
Sbjct: 322 EDPSAAHSAGGFYNNYDFRGYKINVAMAEKSAPRQPAH-----DHGGGRGGYGGGGRRRD 376

Query: 736 XXXXXXXXXPDRHHHGGNRSRPY 804
                    PDRH HGGNRSRPY
Sbjct: 377 NYRDGGNSGPDRHQHGGNRSRPY 399


>ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261263 [Vitis vinifera]
          Length = 462

 Score =  243 bits (620), Expect = 8e-62
 Identities = 136/271 (50%), Positives = 148/271 (54%), Gaps = 28/271 (10%)
 Frame = +1

Query: 76  QAPPANP-SYGGAGGNYPPPSNAYGGT----------------------PSYGG-----D 171
           Q PPA P SYGG    Y PP N++GG                       PSYGG     D
Sbjct: 196 QVPPAAPQSYGGGSAGYYPPPNSFGGNTNYGGEAVPPPTSYTGGPTSYPPSYGGPASGYD 255

Query: 172 NAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNSGSGYGGSPAEVPAEKVKQCDENC 351
                                                G G GGS  E P  KVKQCDENC
Sbjct: 256 GLGDTRGGGRAGPPAGGYDGGFGGPRQQGGGYAGGGGGGGGGGSTTEAPV-KVKQCDENC 314

Query: 352 GDTCDNARIYISNLPADVTTDELQELFSGIGQVARIKQKRGYKDQWPYSIKIYTDDSGKS 531
           GD+CDN+RIYISNLP DVT DEL+ELF GIGQV RIKQKRGYKDQWP++IKIYTD+ G +
Sbjct: 315 GDSCDNSRIYISNLPPDVTVDELRELFGGIGQVGRIKQKRGYKDQWPWNIKIYTDEGGNN 374

Query: 532 KGDAVLSYEDPSAAHSAGGFFNNYELRGHKITVGMAEKSAPRPPSNFXXXXXXXXXXXXX 711
           KGDA LSYEDPSAAHSAGGF+NNYE+RG+KI V MAEKSAPR P  F             
Sbjct: 375 KGDACLSYEDPSAAHSAGGFYNNYEMRGYKINVAMAEKSAPRAPPAF---GHGGGGRGGY 431

Query: 712 XXXXXXXXXXXXXXXXXPDRHHHGGNRSRPY 804
                            PDRHHHGGNRSRPY
Sbjct: 432 GGGDRRRDNYRDNAGSGPDRHHHGGNRSRPY 462


>ref|XP_002521188.1| RNA binding protein, putative [Ricinus communis]
           gi|223539602|gb|EEF41188.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 437

 Score =  242 bits (617), Expect = 2e-61
 Identities = 131/250 (52%), Positives = 150/250 (60%), Gaps = 7/250 (2%)
 Frame = +1

Query: 76  QAPP-ANPSYGGAGGNYPPPSNAYGGTPSYGGDN-----AVXXXXXXXXXXXXXXXXXXX 237
           Q PP A PSYGG+G NYPPP ++YGG                                  
Sbjct: 195 QVPPSAVPSYGGSGVNYPPPPSSYGGNQIMEWKQFLILQVTLVDLHLTHHLMVVLLSGGR 254

Query: 238 XXXXXXXXXXXXRNSG-SGYGGSPAEVPAEKVKQCDENCGDTCDNARIYISNLPADVTTD 414
                       R  G SGY G+ A+ PA K+KQCD NC DTCDN+RIYISNLP DVTTD
Sbjct: 255 GGPPGGYGAGAPRYEGVSGYSGASADAPA-KIKQCDGNCDDTCDNSRIYISNLPPDVTTD 313

Query: 415 ELQELFSGIGQVARIKQKRGYKDQWPYSIKIYTDDSGKSKGDAVLSYEDPSAAHSAGGFF 594
           EL+ELF GIGQV RIKQKRGYKDQWP++IK+YTD+ G +KGDAVLSYEDPSAAHSAGGF+
Sbjct: 314 ELRELFGGIGQVGRIKQKRGYKDQWPWNIKLYTDEKGNNKGDAVLSYEDPSAAHSAGGFY 373

Query: 595 NNYELRGHKITVGMAEKSAPRPPSNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRH 774
           NNY++RG+KI V MAEK+APR PS                                PDRH
Sbjct: 374 NNYDMRGYKINVAMAEKTAPRQPS------YDHGGGRGGYGGGDRRRENNRDGGSGPDRH 427

Query: 775 HHGGNRSRPY 804
           +HGGNRSRPY
Sbjct: 428 YHGGNRSRPY 437


>gb|EEE53925.1| hypothetical protein OsJ_00494 [Oryza sativa Japonica Group]
          Length = 511

 Score =  233 bits (594), Expect = 8e-59
 Identities = 128/247 (51%), Positives = 142/247 (57%), Gaps = 5/247 (2%)
 Frame = +1

Query: 79  APPANPSYGGAG----GNYPPP-SNAYGGTPSYGGDNAVXXXXXXXXXXXXXXXXXXXXX 243
           APP NP Y G      G+ PP     YGG P  GG                         
Sbjct: 289 APPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGGP-----------------GAPPP 331

Query: 244 XXXXXXXXXXRNSGSGYGGSPAEVPAEKVKQCDENCGDTCDNARIYISNLPADVTTDELQ 423
                        G GY GS A  PA KVKQCD NC +TCDNARIYISNLP DVT +ELQ
Sbjct: 332 YHGGGGGGGGGGGGGGYTGSAAPEPAAKVKQCDANCDETCDNARIYISNLPPDVTVEELQ 391

Query: 424 ELFSGIGQVARIKQKRGYKDQWPYSIKIYTDDSGKSKGDAVLSYEDPSAAHSAGGFFNNY 603
           ELF GIGQV RIKQKRGYKDQWP++IKIYTDDSGK+KGDA L+YEDPSAAHSAGGF+NNY
Sbjct: 392 ELFGGIGQVGRIKQKRGYKDQWPWNIKIYTDDSGKNKGDACLAYEDPSAAHSAGGFYNNY 451

Query: 604 ELRGHKITVGMAEKSAPRPPSNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRHHHG 783
           E+RG+KI+V MAEKSAPR P+                                P+RH  G
Sbjct: 452 EMRGYKISVAMAEKSAPRAPA-------YGHGGGRGGYGGGRRDNFRDGGGHGPNRHQGG 504

Query: 784 GNRSRPY 804
           G+RSRPY
Sbjct: 505 GSRSRPY 511


>gb|EEC69997.1| hypothetical protein OsI_00526 [Oryza sativa Indica Group]
          Length = 440

 Score =  233 bits (594), Expect = 8e-59
 Identities = 128/247 (51%), Positives = 142/247 (57%), Gaps = 5/247 (2%)
 Frame = +1

Query: 79  APPANPSYGGAG----GNYPPP-SNAYGGTPSYGGDNAVXXXXXXXXXXXXXXXXXXXXX 243
           APP NP Y G      G+ PP     YGG P  GG                         
Sbjct: 219 APPPNPPYSGGAPGGQGSLPPTYDGGYGGRPMPGGGGP------------------GAPP 260

Query: 244 XXXXXXXXXXRNSGSGYGGSPAEVPAEKVKQCDENCGDTCDNARIYISNLPADVTTDELQ 423
                        G GY GS A  PA KVKQCD NC +TCDNARIYISNLP DVT +ELQ
Sbjct: 261 PYHGGGGGGSGGGGGGYTGSAAPEPAAKVKQCDANCDETCDNARIYISNLPPDVTVEELQ 320

Query: 424 ELFSGIGQVARIKQKRGYKDQWPYSIKIYTDDSGKSKGDAVLSYEDPSAAHSAGGFFNNY 603
           ELF GIGQV RIKQKRGYKDQWP++IKIYTDDSGK+KGDA L+YEDPSAAHSAGGF+NNY
Sbjct: 321 ELFGGIGQVGRIKQKRGYKDQWPWNIKIYTDDSGKNKGDACLAYEDPSAAHSAGGFYNNY 380

Query: 604 ELRGHKITVGMAEKSAPRPPSNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRHHHG 783
           E+RG+KI+V MAEKSAPR P+                                P+RH  G
Sbjct: 381 EMRGYKISVAMAEKSAPRAPA-------YGHGGGRGGYGGGRRDNFRDGGGHGPNRHQGG 433

Query: 784 GNRSRPY 804
           G+RSRPY
Sbjct: 434 GSRSRPY 440