BLASTX nr result
ID: Coptis24_contig00005338
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005338
(1683 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] 172 2e-40
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 133 1e-28
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 131 6e-28
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 129 3e-27
emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera] 127 7e-27
>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
Length = 1290
Score = 172 bits (437), Expect = 2e-40
Identities = 122/394 (30%), Positives = 191/394 (48%), Gaps = 24/394 (6%)
Frame = -1
Query: 1521 TELVNWLDLPDNILFVIANKLTNIKDYISFGGVCRSWNSVYNENLRWYCPPPQIPFLMFN 1342
T + +W +PD+ L +IA KL +++DY+ FGGVC+SW S++ E+ CP + P+LM
Sbjct: 917 TVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIF-EDKECCCPSSKSPWLMLA 975
Query: 1341 TGDADDYENHQTRSFYSPCERRVCNFRAALPDSMVCRGSSHGWLVIVNKDCTDIRLFNPF 1162
+ EN + R FYSP +V R C GS +GWLV + D D+ L NP
Sbjct: 976 -----EKENSEIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDL-DMCLLNPL 1029
Query: 1161 FSVNNQIQLPPLPLIHN-----EDEIRG----EFYIIRAVLSANPSSNPNYVVMVQYGTK 1009
V QI LP L N + +G + +I +AVLS+ PSS P+ VM+ Y
Sbjct: 1030 TRV--QILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSS-PDCAVMIIYSDY 1086
Query: 1008 G-LAFFKPGSETWSVLDLDDNYFSDVIYYNDQLYAVTWNGQLFSCDVNHPRPYLFHVAQS 832
G LAF KPG +TW++L+ + D+IY+N AV + +++ CD++ + A +
Sbjct: 1087 GRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAA 1146
Query: 831 PS----GSFEMKFVYLLVSSGELLLIKKRLYVKCSTYL----TARIEIFKLDLIGSKWVE 676
P+ E + YL+ S GE+ ++ + LY + T + KLD+ +W E
Sbjct: 1147 PALQDVDEIEYEAKYLVESGGEIYMVTRNLYDTARRDIPYMRTWTFSVLKLDMCNKRWEE 1206
Query: 675 LKKFCGQALFLXXXXXXXXXXSYFPGCKLNCIYFTHESLECDPSGDLTDFCTNFKGDQLY 496
++ + FL S +P + N IYFT D+C + +
Sbjct: 1207 VENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFT------------DDYCGFLNIPRNF 1254
Query: 495 DMEDWNIKG----HYPFKYE--MKFPNPIWIEPT 412
DM +N + HYP ++ F P+WI P+
Sbjct: 1255 DMGIYNFQNTQIEHYPVGHDALSMFSAPLWIRPS 1288
>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 398
Score = 133 bits (335), Expect = 1e-28
Identities = 109/410 (26%), Positives = 186/410 (45%), Gaps = 43/410 (10%)
Frame = -1
Query: 1515 LVNWLDLPDNILFVIANKLTNIKDYISFGGVCRSWNSVYNENLRWYCPPPQIPFLMFNTG 1336
+++W LP ++ +I+ LT DY+ VC +W + PPQ+P+LM
Sbjct: 2 IMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHL--PPQLPWLMLPQS 59
Query: 1335 DADDYENHQTRSFYSPCERRVCNFRAALPDSMVCR---GSSHGWLVIVNKDCTDIRLFNP 1165
+ N R+F+S + LP+ + GSSHGWL+I++ D I L NP
Sbjct: 60 QSQS--NQSRRAFFSLSTNKFHFLN--LPEVSYRKRHCGSSHGWLMILD-DTPTILLINP 114
Query: 1164 FFSVNNQIQLPPLP-----LIHNEDEIRGEF--------------------YIIRAVLSA 1060
++ LPPL + N +I E+ +I + VLS+
Sbjct: 115 L--TRAKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSS 172
Query: 1059 NPSSNPNYVVM-VQYGTKGLAFFKPGSETWSVLDLDDNYFSDVIYYNDQLYAVTWNGQLF 883
+P + N+VV+ + T LA+ + G ++WS+++ ++ DVI+ N YAV GQ+
Sbjct: 173 SPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIV 232
Query: 882 SCDVNHPRPYLFHVAQSPSGSFEMKFVYLLVSSGELLLIKKRLYVKCS----------TY 733
CD++ P + + +M+ YL+ S ELLL+ + L ++ Y
Sbjct: 233 ICDISSDSPRVSFMETPRQAGGDMQ--YLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIY 290
Query: 732 LTARIEIFKLDLIGSKWVELKKFCGQALFLXXXXXXXXXXSYFPGCKLNCIYFTHESLEC 553
T R E+F+LD G +W+ + +ALF+ + F GC NCIY+T + L+
Sbjct: 291 RTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDA 350
Query: 552 DPSGDLTDFCTNFKGDQLYDMEDWNIK--GHYP--FKYEMKFPNPIWIEP 415
+ G D ++ + D I+ YP F +++ P+W+ P
Sbjct: 351 NYDGHFGDHDLG-----IFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSP 395
>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
Length = 389
Score = 131 bits (329), Expect = 6e-28
Identities = 110/409 (26%), Positives = 184/409 (44%), Gaps = 42/409 (10%)
Frame = -1
Query: 1515 LVNWLDLPDNILFVIANKLTNIKDYISFGGVCRSWNSVYNENLRWYCPPPQIPFLMFNTG 1336
+ +W L +L IA K DY+ F VC +W + + P Q+P+LM
Sbjct: 1 MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHL--PTQLPWLML--- 55
Query: 1335 DADDYENHQTRSFYSPCERRVCNFRAALPDSMVCR---GSSHGWLVIVNKDCTDIRLFNP 1165
+H R F+S + + LP++ R GSSHGWL+I++ + +I L NP
Sbjct: 56 -PQSQPHHTHRPFFSLSLNKFHFLQ--LPEASHRRRRRGSSHGWLLILD-EAPEIFLLNP 111
Query: 1164 FFSVNNQIQLPPLPLIHN-----------EDEIR---GEFY-----------IIRAVLSA 1060
+++ LPPL N E +R G+ Y I + +LS+
Sbjct: 112 L--TRSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSS 169
Query: 1059 NPSSNPNYVVMVQYGTKG-LAFFKPGSETWSVLDLDDNYFSDVIYYNDQLYAVTWNGQLF 883
+P++ +++ +V G LA + ++W+ L+ +Y DVI++ YAV G +
Sbjct: 170 SPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIA 229
Query: 882 SCDVN--HPRPYLFHVAQSPSGSFEMKFVYLLVSSGELLLIKKRLYVKCST--------Y 733
CDV+ PR + + Q G + YL+ S ELLL+ + L + Y
Sbjct: 230 VCDVSGSSPRVSIIEMPQQFGGDLQ----YLVESGEELLLVTRYLDLTYDVEPDQTSLIY 285
Query: 732 LTARIEIFKLDLIGSKWVELKKFCGQALFLXXXXXXXXXXSYFPGCKLNCIYFTHESLEC 553
T R ++ +LDL +W + +ALFL FPGCK NCIY+T + E
Sbjct: 286 RTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSED 345
Query: 552 DPSGDLTDFCTNFKGDQ---LYDMEDWNIKGHYPFKYEMKFPNPIWIEP 415
+ G G+Q ++++ED +I+ + +++P P+W+ P
Sbjct: 346 NYDG--------IGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386
>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
Length = 389
Score = 129 bits (323), Expect = 3e-27
Identities = 109/409 (26%), Positives = 183/409 (44%), Gaps = 42/409 (10%)
Frame = -1
Query: 1515 LVNWLDLPDNILFVIANKLTNIKDYISFGGVCRSWNSVYNENLRWYCPPPQIPFLMFNTG 1336
+ +W L +L IA K DY+ F VC +W + + P Q+P+LM
Sbjct: 1 MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHL--PTQLPWLML--- 55
Query: 1335 DADDYENHQTRSFYSPCERRVCNFRAALPDSMVCR---GSSHGWLVIVNKDCTDIRLFNP 1165
+H R F+S + + LP++ R GSSHGWL+I++ + +I L NP
Sbjct: 56 -PQSQPHHTHRPFFSLSLNKFHFLQ--LPEASHRRRRRGSSHGWLLILD-EAPEIFLLNP 111
Query: 1164 FFSVNNQIQLPPLPLIHN-----------EDEIR---GEFY-----------IIRAVLSA 1060
+++ LPPL N E +R G+ Y I + +LS+
Sbjct: 112 L--TRSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSS 169
Query: 1059 NPSSNPNYVVMVQYGTKG-LAFFKPGSETWSVLDLDDNYFSDVIYYNDQLYAVTWNGQLF 883
+P++ +++ +V G LA + ++W+ L+ +Y DVI++ YAV G +
Sbjct: 170 SPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIA 229
Query: 882 SCDVN--HPRPYLFHVAQSPSGSFEMKFVYLLVSSGELLLIKKRLYVKCST--------Y 733
CDV+ PR + + Q G + YL+ S ELLL+ + L + Y
Sbjct: 230 VCDVSGSSPRVSIIEMPQQFGGDLQ----YLVESGEELLLVTRYLDLTYDVEXDQTSLIY 285
Query: 732 LTARIEIFKLDLIGSKWVELKKFCGQALFLXXXXXXXXXXSYFPGCKLNCIYFTHESLEC 553
T R ++ +LD +W + +ALFL FPGCK NCIY+T + E
Sbjct: 286 RTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSED 345
Query: 552 DPSGDLTDFCTNFKGDQ---LYDMEDWNIKGHYPFKYEMKFPNPIWIEP 415
+ G G+Q ++++ED +I+ + +++P P+W+ P
Sbjct: 346 NYDG--------IGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386
>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
Length = 530
Score = 127 bits (320), Expect = 7e-27
Identities = 117/371 (31%), Positives = 174/371 (46%), Gaps = 35/371 (9%)
Frame = -1
Query: 1518 ELVNWLDLPDNILFVIANKLTNIKDYISFGGVCRSWNSVYNE-------NLRWYCPPPQI 1360
E W LPD++L I N L +I D I FG VC W+S+ + N R + PP +
Sbjct: 129 EYSGWAWLPDDLLEPILNNLASIVDSIRFGAVCTPWHSLAVKSFQRLPVNQRPHLQPPPL 188
Query: 1359 PFLMFNTGDADDYENHQTRSFYSPCERRVCNFRAALPDSMVCRGSSHGWLVIVNKDCTDI 1180
P+LM + +RSFYS +++ F +P GSSHGWL I + +
Sbjct: 189 PWLMV----LSKPNSKDSRSFYSITHQKLSKFHLPVPPGTRYCGSSHGWL-ITTDETNAV 243
Query: 1179 RLFNPFFSVNNQIQLPPLPLIH-NEDEIRG-EFYIIRAVLSANPSSNP-NYVVMVQYG-T 1012
L +PF I+LPPL + + + G E+++ + VLSANP+SNP ++V+MV YG
Sbjct: 244 SLLHPF--SRQVIRLPPLTRLKIPQRTVYGFEYHLHKGVLSANPTSNPDDFVLMVIYGHD 301
Query: 1011 KGLAFFKPGSETWSVLD--------LDDNY--------FSDVIYYNDQL--YAVTWNGQL 886
KGLAF K G + W+ +D LD Y F DVIY +L YA++++ Q+
Sbjct: 302 KGLAFIKSGDQNWAYIDSMVMKDDVLDSPYFLDLSLFGFEDVIYQERELQFYALSYDSQV 361
Query: 885 FSCDVNHPRPYLFHVAQSPSGSFEMKFVYLLVSSGE---LLLIKK-RLYVKCSTYLTARI 718
+ + + V + F F LV S E L I+K Y K S + ++
Sbjct: 362 LAIKTS-GIGNMVKVVPPYNFGFVPAFKLYLVESPEGRDLWQIEKVSFYDKSSGF---KV 417
Query: 717 EIFKLDLIGSKWVELKKFCGQALFLXXXXXXXXXXSYFPGCKLNCIYF--THESLECDPS 544
+ +WVE+ ALFL S F GC+ +CIY T ++LE +
Sbjct: 418 FVMVDRETKPEWVEVNSLGDVALFLGDNDSIAVTASRFSGCRPSCIYVASTDDTLEMNME 477
Query: 543 GDLTDFCTNFK 511
+ F +K
Sbjct: 478 DERESFRYRYK 488