BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005336
         (3809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   408   0.0  
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   392   0.0  
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   407   0.0  
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   402   0.0  
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         402   0.0  

>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  408 bits (1049), Expect(3) = 0.0
 Identities = 217/449 (48%), Positives = 290/449 (64%), Gaps = 23/449 (5%)
 Frame = +1

Query: 874  ERESGRNPKTLRTYRGGEFIYKEFWNYCKEKGIKRQLTVRHTQQQNGVTERKNRTIAEMA 1053
            E +S R  K LR+ +GGE+I KEF  YC+  GI+RQLT  ++ QQNGV ERKNRTI +MA
Sbjct: 363  ENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTAGYSTQQNGVAERKNRTINDMA 422

Query: 1054 RSMLKGKALPNQFWAEAVNMTIYILNRSPIKAVPSKTPYEAWHERKPQVKLLKVFGYPAF 1233
             SML+ K +P  FWAEAVN  IYILNRSP KAVP++TP+EAW+ +KP +  ++VFG   +
Sbjct: 423  NSMLQDKGMPKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICY 482

Query: 1234 ALVPSQEREKFDEKGEKYIFIGYSDESKGFRLYSPTSKKLVVSSDVVFDEMGK*NWDDAG 1413
            A VP+Q+R KFD K ++ IF+GY+D  KG+RLY+   KK+++  DV+FDE    NW    
Sbjct: 483  AQVPAQKRVKFDNKSDRCIFVGYADGIKGYRLYNLEKKKIIIIRDVIFDESATWNWKSPE 542

Query: 1414 SSQS----SRAIEFYEPEANQ----EDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-- 1563
            +S +    +  I   +P  +     ED                              P  
Sbjct: 543  ASSTPLLPTTTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPES 602

Query: 1564 -PRKIRSM------------SDVYENCNLALFSEPQSFNEAVQDEKWKRAMDDKITIIEK 1704
             PR++RSM            S+ +E CN ++  EPQSF EA + + W +AM+D+I +IEK
Sbjct: 603  APRRVRSMVELLESTSQQRGSEQHEFCNYSVV-EPQSFQEAEKHDNWIKAMEDEIHMIEK 661

Query: 1705 NSTWKLVDLPEGNDVISLKRVYKTKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVV 1884
            N+TW+LVD P   +VI +K VYKTK   DGS+QK KA LVAK + Q+PG+D+  T+APV 
Sbjct: 662  NNTWELVDRPRDREVIGVKWVYKTKLNLDGSVQKYKARLVAKGFKQKPGIDYYETYAPVA 721

Query: 1885 RMEIIRVVLALAAQMELPVFQLDVKSAFLNGDLEEEVYVEQTLGYVKEGAENKVYKLQKV 2064
            R+E IR ++ALAAQ    ++QLDVKSAFLNG L+EE+YVEQ  G+  +G ENKV++L+K 
Sbjct: 722  RLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKA 781

Query: 2065 LYGLKQAPRTWNSKIDGYFQQTGFSKSRS 2151
            LYGLKQAPR W S+ID YF Q GF+KS S
Sbjct: 782  LYGLKQAPRVWYSQIDKYFIQKGFAKSIS 810



 Score =  262 bits (669), Expect(3) = 0.0
 Identities = 129/226 (57%), Positives = 171/226 (75%)
 Frame = +3

Query: 2475 DGALKVDEKVYQCLVGSLLYLTHTRLYIMYTVSLLSRFLSEPSKLHLAAAKRVLRYLQGT 2654
            DGA KVD  +Y+ LVGSLLYLT TR  IM+  SLLSR++S PS+L+  AAKRVLRY++GT
Sbjct: 914  DGADKVDPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGT 973

Query: 2655 KSFGLKYVKEEVNSLIGFTDSYWAGSLDDRKSTSGYAFCLGSKLIAWSSKKQKTVALSSV 2834
              +G+ Y   + + LIG+TDS WAG LDD K TSGYAF LGS + +WS+KKQ  VALSS 
Sbjct: 974  ADYGIWYKPVKESKLIGYTDSDWAGCLDDMKGTSGYAFSLGSGMCSWSTKKQNIVALSSA 1033

Query: 2835 EAEYIVAMDAVCEGVWLRRILKDLQQEVKTPTTIFCDNMFAIVMTKNPVFHSRTKHIELR 3014
            EAEY+ A  AV + VWLRRI++DL ++   PTTI+CD+  AI +++NPV H RTKHI ++
Sbjct: 1034 EAEYVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIK 1093

Query: 3015 YHYIRHKVEKKKVELKFINTNEQLTDMLTKAVSMDKFVRARDTMNV 3152
            YHYIR  V++++V+L+F  T+EQL D+ TKA+S +KFVR R+ + V
Sbjct: 1094 YHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFVRDRELIGV 1139



 Score =  124 bits (310), Expect(3) = 0.0
 Identities = 59/98 (60%), Positives = 74/98 (75%)
 Frame = +2

Query: 2180 LYIKKEGNELLIVCLYVDDLIYTSTSMKMLQDFKEAMMKEYEMTDLGLMKYFLGIQVQQS 2359
            LY+ K G ++LIV LYVDDLIYT  S KM+QDFK+ MM  YEM+DLGL+ YFLG++V QS
Sbjct: 814  LYVNKTGTDILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLYYFLGMEVHQS 873

Query: 2360 RGNIFISQEKYLEDLLKRFSMSNCKLISSPAALNEKLK 2473
               IFISQ KY E++LK+F M NCK +++P   NEK K
Sbjct: 874  DEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQK 911



 Score = 73.2 bits (178), Expect(2) = 4e-18
 Identities = 40/87 (45%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
 Frame = +3

Query: 96  KKVRMSKSSLTRVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKF 269
           K+    K   +RV EIV+Q+R  G+ I D+K+V+KIL SLP  ++++VAAIE SKDLS  
Sbjct: 122 KESEKVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTL 181

Query: 270 SFHELMGSLEAHEKRLNRFANSSLQSS 350
           +  +LM SLE+HE+R  +   SS++++
Sbjct: 182 TIQQLMSSLESHEERKLQREGSSIENA 208



 Score = 47.4 bits (111), Expect(2) = 4e-18
 Identities = 20/40 (50%), Positives = 31/40 (77%)
 Frame = +2

Query: 2   WEILQKEFGGCDEVISIKLQSLWRDFDNLTMKESENVQEF 121
           W+ L++EF G  +V+++KLQ+L R F NL MKESE V+++
Sbjct: 91  WDKLKEEFQGSQKVLAVKLQTLRRQFQNLLMKESEKVKDY 130



 Score = 56.6 bits (135), Expect(2) = 2e-07
 Identities = 23/52 (44%), Positives = 37/52 (71%)
 Frame = +3

Query: 3552 ATTSVPIFDGEHYDYWSI*MKTIFISQDLWELVQDGYAEGGSAKILKRNQRE 3707
            A + VP+F GE+YD WSI M+T+ +SQ LW++V++GY E  + + L   Q++
Sbjct: 2    AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKK 53



 Score = 28.1 bits (61), Expect(2) = 2e-07
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 3719 LQFIHQGVSKSIFP*TMGASKSK 3787
            L  I QGV++S+FP  +GA KSK
Sbjct: 66   LFLIQQGVAESLFPRIIGAKKSK 88


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  392 bits (1007), Expect(3) = 0.0
 Identities = 216/435 (49%), Positives = 275/435 (63%), Gaps = 11/435 (2%)
 Frame = +1

Query: 874  ERESGRNPKTLRTYRGGEFIYKEFWNYCKEKGIKRQLTVRHTQQQNGVTERKNRTIAEMA 1053
            E +SG   K+LRT RGGEF+  +F  +C+E GI+R+LT  +T +QNGV ERKNRT+ EMA
Sbjct: 559  ENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRELTAPYTPEQNGVAERKNRTVVEMA 618

Query: 1054 RSMLKGKALPNQFWAEAVNMTIYILNRSPIKAVPSKTPYEAWHERKPQVKLLKVFGYPAF 1233
            RS LK K LP+ FW EAV   +Y LN SP K V + TP EAW+ +KP+V  L++FG  A+
Sbjct: 619  RSSLKAKGLPDYFWGEAVATVVYFLNISPTKDVWNTTPLEAWNGKKPRVSHLRIFGCIAY 678

Query: 1234 ALVPSQEREKFDEKGEKYIFIGYSDESKGFRLYSPTSKKLVVSSDVVFDEMGK*NWDDAG 1413
            ALV      K DEK  K IF+GYS +SK +RLY+P S K+++S +VVF+E    N++   
Sbjct: 679  ALV--NFHSKLDEKSTKCIFVGYSLQSKAYRLYNPISGKVIISRNVVFNEDVSWNFNSGN 736

Query: 1414 SSQSSRAIEFYEPEANQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRKIRSMSD- 1590
               + + +   E  A                                  P    RS  + 
Sbjct: 737  MMSNIQLLPTDEESAVDFGNSPNSSPVSSSVSSPIAPSTTVAPDESSVEPIPLRRSTREK 796

Query: 1591 ---------VYENCNLALF-SEPQSFNEAVQDEKWKRAMDDKITIIEKNSTWKLVDLPEG 1740
                     V  +C  AL  S+P  + EAV+  +WK AM ++I  IE+NSTW+LVD PEG
Sbjct: 797  KPNPKYSNTVNTSCQFALLVSDPICYEEAVEQSEWKNAMIEEIQAIERNSTWELVDAPEG 856

Query: 1741 NDVISLKRVYKTKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVVRMEIIRVVLALA 1920
             +VI LK V++TK+  DGSIQK KA LVAK YSQQ GVDF+ TF+PV R E +RVVLALA
Sbjct: 857  KNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQQGVDFDETFSPVARFETVRVVLALA 916

Query: 1921 AQMELPVFQLDVKSAFLNGDLEEEVYVEQTLGYVKEGAENKVYKLQKVLYGLKQAPRTWN 2100
            AQ+ LPV+Q DVKSAFLNGDLEEEVYV Q  G++  G ENKVYKL+K LYGLKQAPR W 
Sbjct: 917  AQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMITGNENKVYKLRKALYGLKQAPRAWY 976

Query: 2101 SKIDGYFQQTGFSKS 2145
            SKID +FQ +GF +S
Sbjct: 977  SKIDSFFQGSGFRRS 991



 Score =  226 bits (575), Expect(3) = 0.0
 Identities = 119/236 (50%), Positives = 153/236 (64%)
 Frame = +3

Query: 2475 DGALKVDEKVYQCLVGSLLYLTHTRLYIMYTVSLLSRFLSEPSKLHLAAAKRVLRYLQGT 2654
            DG  K + K+++ LVG L YLTHTR  I ++VS++SRFL  P+K H  AAKRVLRY+ GT
Sbjct: 1098 DGTEKANPKLFRSLVGGLNYLTHTRPDIAFSVSVVSRFLQSPTKQHFGAAKRVLRYVAGT 1157

Query: 2655 KSFGLKYVKEEVNSLIGFTDSYWAGSLDDRKSTSGYAFCLGSKLIAWSSKKQKTVALSSV 2834
              FG+ Y K     L+GFTDS +AG LDDRKSTSG  F  GS ++ WSSKKQ+TVALS+ 
Sbjct: 1158 TDFGIWYSKAPNFRLVGFTDSDYAGCLDDRKSTSGSCFSFGSGVVTWSSKKQETVALSTS 1217

Query: 2835 EAEYIVAMDAVCEGVWLRRILKDLQQEVKTPTTIFCDNMFAIVMTKNPVFHSRTKHIELR 3014
            EAEY  A  A  + +WLR++L+D   E K  T IF D+  AI M KNP FH RTKHI+++
Sbjct: 1218 EAEYTAASLAARQALWLRKLLEDFSYEQKESTEIFSDSKSAIAMAKNPSFHGRTKHIDVQ 1277

Query: 3015 YHYIRHKVEKKKVELKFINTNEQLTDMLTKAVSMDKFVRARDTMNVAAS*QEGGAS 3182
            YH+IR  V   ++ LKF +TNEQ  D+ TK++   K    R  + V      G  S
Sbjct: 1278 YHFIRTLVADGRIVLKFCSTNEQAADIFTKSLPQAKHEYFRLQLGVCDFESRGSVS 1333



 Score =  123 bits (308), Expect(3) = 0.0
 Identities = 56/99 (56%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2180 LYIKKEG-NELLIVCLYVDDLIYTSTSMKMLQDFKEAMMKEYEMTDLGLMKYFLGIQVQQ 2356
            LY+KK+G +E L+VCLYVDD+IY  +S  ++ DFK  MM+ +EM+DLGL+KYFLG++V Q
Sbjct: 997  LYLKKQGTDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQ 1056

Query: 2357 SRGNIFISQEKYLEDLLKRFSMSNCKLISSPAALNEKLK 2473
             +  IFISQ+KY EDLLK+F M NC++ ++P  +NEKL+
Sbjct: 1057 DKDGIFISQKKYAEDLLKKFQMMNCEVATTPMNINEKLQ 1095



 Score = 77.4 bits (189), Expect(2) = 5e-20
 Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
 Frame = +3

Query: 123 LTRVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKFSFHELMGSL 296
           L+R + IV+++RS G+ I ++ +V K+LRSL   F+HVV AIE SKDLS +SF ELM SL
Sbjct: 130 LSRTSAIVNRMRSYGEKIDNQIVVSKVLRSLTTKFEHVVTAIEESKDLSTYSFDELMSSL 189

Query: 297 EAHEKRLNRFANSSLQSSMNVDGE 368
            AHE RLNR      + +  V GE
Sbjct: 190 LAHEDRLNRSREKVQEKAFQVKGE 213



 Score = 49.7 bits (117), Expect(2) = 5e-20
 Identities = 22/40 (55%), Positives = 33/40 (82%)
 Frame = +2

Query: 2   WEILQKEFGGCDEVISIKLQSLWRDFDNLTMKESENVQEF 121
           WEIL++E+ G D+VI++KLQ+L RDF+ L M E+E+VQ +
Sbjct: 90  WEILKQEYFGDDKVITVKLQTLRRDFETLFMNENESVQGY 129



 Score = 75.9 bits (185), Expect = 8e-11
 Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = +1

Query: 568 KCNRCRNPNHSQRDC*YKTRWEENTTNFTEG-NDEDQLFYSCMNAENENQDTWYLDSGCS 744
           +C  C+   H + DC  K + E+   NFT+   +E +LF +           W++DSGCS
Sbjct: 259 QCRYCKKFGHKEVDCWTKQKDEQKDANFTQNVEEESKLFMASSQITESANAVWFIDSGCS 318

Query: 745 NHMTGNQRIFV*LDDSFYSHVKLGDGNMKKIEGKGVSVIYT 867
           NHM+ ++ +F  LD+S  S V+LGD     IEGKG   I T
Sbjct: 319 NHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKT 359


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  407 bits (1046), Expect(3) = 0.0
 Identities = 212/429 (49%), Positives = 275/429 (64%), Gaps = 3/429 (0%)
 Frame = +1

Query: 874  ERESGRNPKTLRTYRGGEFIYKEFWNYCKEKGIKRQLTVRHTQQQNGVTERKNRTIAEMA 1053
            E++SG+  K LRT R GEF+  +F  +C+E+G+ R+LT  ++ +QNGV ERKNRT+ EMA
Sbjct: 665  EKQSGKCIKVLRTDRXGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMA 724

Query: 1054 RSMLKGKALPNQFWAEAVNMTIYILNRSPIKAVPSKTPYEAWHERKPQVKLLKVFGYPAF 1233
            RSM+  K L N FWAE V   +Y+LN SP KAV ++TPYEAW+ RKP V  LKVFG  A+
Sbjct: 725  RSMMXAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAY 784

Query: 1234 ALVPSQEREKFDEKGEKYIFIGYSDESKGFRLYSPTSKKLVVSSDVVFDEMGK*NW---D 1404
             L  S  R K DEK  K IFIGY  +SKG++LY+P S K++VS +VVFDE     W   +
Sbjct: 785  TLXBSHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASXTWRVSE 844

Query: 1405 DAGSSQSSRAIEFYEPEANQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRKIRSM 1584
            D    + S   E  + E  Q                                PPRK RS+
Sbjct: 845  DGALVEISSESEMAQSEDQQPSVQIPXSPTPSHSPSSPNLSXSSSSQSSEETPPRKFRSL 904

Query: 1585 SDVYENCNLALFSEPQSFNEAVQDEKWKRAMDDKITIIEKNSTWKLVDLPEGNDVISLKR 1764
             D+YE   +   ++P +F EAV+ E+W  AM ++I  IEKN TW+LV+LPE  +VI +K 
Sbjct: 905  RDIYETTQVLFVADPTTFEEAVEKEEWCSAMKEEIAAIEKNETWELVELPEDKNVIGVKW 964

Query: 1765 VYKTKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVVRMEIIRVVLALAAQMELPVF 1944
            V++TK++ DGSIQK KA LVAK Y+QQ GVD++ TF+PV R E +R +LALAA M   V+
Sbjct: 965  VFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRTLLALAAHMHWCVY 1024

Query: 1945 QLDVKSAFLNGDLEEEVYVEQTLGYVKEGAENKVYKLQKVLYGLKQAPRTWNSKIDGYFQ 2124
            Q DVKSAFLNG+L EEVY  Q  G++    E  VY+L+  LYGLKQAPR W SKID YF 
Sbjct: 1025 QFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLKXALYGLKQAPRAWYSKIDSYFV 1084

Query: 2125 QTGFSKSRS 2151
            + GF KS+S
Sbjct: 1085 ENGFEKSKS 1093



 Score =  215 bits (548), Expect(3) = 0.0
 Identities = 117/251 (46%), Positives = 152/251 (60%)
 Frame = +3

Query: 2475 DGALKVDEKVYQCLVGSLLYLTHTRLYIMYTVSLLSRFLSEPSKLHLAAAKRVLRYLQGT 2654
            DG  + D + ++ LVG L+YLTHTR  I + V ++SRF+  PSK HL A KR+LRY+ GT
Sbjct: 1198 DGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHLGATKRLLRYIAGT 1257

Query: 2655 KSFGLKYVKEEVNSLIGFTDSYWAGSLDDRKSTSGYAFCLGSKLIAWSSKKQKTVALSSV 2834
              F +     +   L+G+TDS WAG L+DRKSTSGY F LGS                  
Sbjct: 1258 YDFRIWXGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGS------------------ 1299

Query: 2835 EAEYIVAMDAVCEGVWLRRILKDLQQEVKTPTTIFCDNMFAIVMTKNPVFHSRTKHIELR 3014
             AEY VA  + C+ VWLRRIL D+ QE + PT I+CDN  AI MTKNP +H RTKH+++R
Sbjct: 1300 -AEYTVATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIR 1358

Query: 3015 YHYIRHKVEKKKVELKFINTNEQLTDMLTKAVSMDKFVRARDTMNVAAS*QEGGASELKI 3194
             H+IR  V + KV L++ NTNEQ+ D+LTKA+S DK V  R  + V              
Sbjct: 1359 VHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLGVCN------------ 1406

Query: 3195 FKIRGSVENEF 3227
            F+ R SVE+ F
Sbjct: 1407 FESRRSVEDGF 1417



 Score =  115 bits (289), Expect(3) = 0.0
 Identities = 51/99 (51%), Positives = 77/99 (77%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2180 LYIKKEG-NELLIVCLYVDDLIYTSTSMKMLQDFKEAMMKEYEMTDLGLMKYFLGIQVQQ 2356
            LY+K++G N+LLI+CLYVDD+IY  +S  ++ +FK  M K++EM+DLGL+ +FLG++V+Q
Sbjct: 1097 LYLKRQGKNDLLIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQ 1156

Query: 2357 SRGNIFISQEKYLEDLLKRFSMSNCKLISSPAALNEKLK 2473
                +F+SQ KY  DLLK+F+M NCK+++ P   NEKL+
Sbjct: 1157 VEDGVFVSQRKYAVDLLKKFNMLNCKVVAIPMNSNEKLQ 1195



 Score =  132 bits (333), Expect = 6e-28
 Identities = 71/172 (41%), Positives = 96/172 (55%), Gaps = 6/172 (3%)
 Frame = +3

Query: 2601 SKLHLAAAKRVLRYLQGTKSFGLKYVKEEVNSLIGFTDSYWAGSLDDRKSTSGYAFCLGS 2780
            SK HL AA R+LRY+ GT  F + Y   +   L+G+TDS WAG                 
Sbjct: 5    SKQHLGAAXRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGX---------------- 48

Query: 2781 KLIAWSSKKQKTVALSSVEAEYIVAMDAVCEGVWLRRILKDLQQEVKTPTTIFCDNMFAI 2960
              + W SKKQ    LSS EAEY     + C+ VWLRRIL D+ QE +  T I+CDN  AI
Sbjct: 49   --VCWXSKKQAVTXLSSSEAEYTAXTSSACQAVWLRRILXDINQEHEEXTVIYCDNKAAI 106

Query: 2961 VMTKNPVFHSRTKHIELRYHYIRHKV------EKKKVELKFINTNEQLTDML 3098
             MTKNP +H RTKH+++R H+IR  V      E   +++K +  ++ L D++
Sbjct: 107  AMTKNPAYHGRTKHVDIRVHFIRDLVVEGECYEFWSIKMKTLFKSQDLWDLV 158



 Score = 80.9 bits (198), Expect(2) = 2e-19
 Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
 Frame = +3

Query: 123 LTRVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKFSFHELMGSL 296
           L+RVA IV+Q+RS G+ I D+ +V K+LRSL   FDHVVA IE SKDLS +SF ELMGSL
Sbjct: 247 LSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAXIEESKDLSTYSFDELMGSL 306

Query: 297 EAHEKRLNRFANSSLQSSMNVDGE 368
           ++HE RL+   + + +      GE
Sbjct: 307 QSHEVRLSXTEDKNEEKXFYTKGE 330



 Score = 44.3 bits (103), Expect(2) = 2e-19
 Identities = 20/40 (50%), Positives = 27/40 (67%)
 Frame = +2

Query: 2   WEILQKEFGGCDEVISIKLQSLWRDFDNLTMKESENVQEF 121
           W  L+  F G  +VI++KLQSL RDF+ L MK  E+ Q+F
Sbjct: 207 WTTLETAFQGSSKVITVKLQSLRRDFETLHMKNGESXQDF 246



 Score = 72.8 bits (177), Expect = 7e-10
 Identities = 36/97 (37%), Positives = 52/97 (53%)
 Frame = +1

Query: 571 CNRCRNPNHSQRDC*YKTRWEENTTNFTEGNDEDQLFYSCMNAENENQDTWYLDSGCSNH 750
           C  C+   H Q +C  K R E+      +  D+ +LF +       + + W+LDSGCSNH
Sbjct: 383 CYYCKRFGHVQAECWKKERQEKQANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNH 442

Query: 751 MTGNQRIFV*LDDSFYSHVKLGDGNMKKIEGKGVSVI 861
           MTG + +F  LD+S    VKLGD    ++EGKG   +
Sbjct: 443 MTGIKSLFKELDESHKLXVKLGDDXQVQVEGKGTVAV 479


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  402 bits (1033), Expect(3) = 0.0
 Identities = 211/430 (49%), Positives = 281/430 (65%), Gaps = 7/430 (1%)
 Frame = +1

Query: 874  ERESGRNPKTLRTYRGGEFIYKEFWNYCKEKGIKRQLTVRHTQQQNGVTERKNRTIAEMA 1053
            E+ESG   KT+R+ RGGEF  KEF  YC++ GI+RQLTV  + QQNGV ERKNRTI EMA
Sbjct: 583  EKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMA 642

Query: 1054 RSMLKGKALPNQFWAEAVNMTIYILNRSPIKAVPSKTPYEAWHERKPQVKLLKVFGYPAF 1233
            RSMLK K LP + WAEAV   +Y+LNRSP K+V  KTP EAW  RKP V  L+VFG  A 
Sbjct: 643  RSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAH 702

Query: 1234 ALVPSQEREKFDEKGEKYIFIGYSDESKGFRLYSPTSKKLVVSSDVVFDEMGK*NWDDAG 1413
            A VP ++R K D+K EKYIFIGY + SKG++LY+P +KK ++S ++VFDE G+ +W+   
Sbjct: 703  AHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNE 762

Query: 1414 SSQS-SRAIEFYEPEANQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRKIRSMSD 1590
               +     E  EPE  +E+                                R I+ + +
Sbjct: 763  EDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRF---RSIQELYE 819

Query: 1591 VYENC-NLALF-----SEPQSFNEAVQDEKWKRAMDDKITIIEKNSTWKLVDLPEGNDVI 1752
            V EN  NL LF      EP  F +A++ + W+ AMD++I  I+KN TW+L  LP G+  I
Sbjct: 820  VTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAI 879

Query: 1753 SLKRVYKTKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVVRMEIIRVVLALAAQME 1932
             +K VYK K    G +++ KA LVAK YSQ+ G+D++  FAPV R+E +R++++LAAQ +
Sbjct: 880  GVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNK 939

Query: 1933 LPVFQLDVKSAFLNGDLEEEVYVEQTLGYVKEGAENKVYKLQKVLYGLKQAPRTWNSKID 2112
              + Q+DVKSAFLNGDLEEEVY+EQ  GY+ +G E+KV +L+KVLYGLKQAPR WN++ID
Sbjct: 940  WKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRID 999

Query: 2113 GYFQQTGFSK 2142
             YF++  F K
Sbjct: 1000 KYFKEKDFIK 1009



 Score =  233 bits (593), Expect(3) = 0.0
 Identities = 110/229 (48%), Positives = 149/229 (65%)
 Frame = +3

Query: 2490 VDEKVYQCLVGSLLYLTHTRLYIMYTVSLLSRFLSEPSKLHLAAAKRVLRYLQGTKSFGL 2669
            VD   ++ LVGSL YLT TR  I+Y V ++SR++  P+  H  AAKR+LRY++GT +FGL
Sbjct: 1121 VDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGL 1180

Query: 2670 KYVKEEVNSLIGFTDSYWAGSLDDRKSTSGYAFCLGSKLIAWSSKKQKTVALSSVEAEYI 2849
             Y       L+G++DS W G +DDRKSTSG+ F +G     W SKKQ  V LS+ EAEY+
Sbjct: 1181 HYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYV 1240

Query: 2850 VAMDAVCEGVWLRRILKDLQQEVKTPTTIFCDNMFAIVMTKNPVFHSRTKHIELRYHYIR 3029
             A   VC  +WLR +LK+L    + PT IF DN  AI + KNPVFH R+KHI+ RYHYIR
Sbjct: 1241 AATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIR 1300

Query: 3030 HKVEKKKVELKFINTNEQLTDMLTKAVSMDKFVRARDTMNVAAS*QEGG 3176
              V KK V+L+++ T++Q+ D  TK +  + F++ R  + VA S   GG
Sbjct: 1301 ECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKSSLRGG 1349



 Score =  100 bits (250), Expect(3) = 0.0
 Identities = 46/97 (47%), Positives = 68/97 (70%)
 Frame = +2

Query: 2180 LYIKKEGNELLIVCLYVDDLIYTSTSMKMLQDFKEAMMKEYEMTDLGLMKYFLGIQVQQS 2359
            LYIK +  ++LI CLYVDDLI+T  +  + ++FK+ M KE+EMTD+GLM Y+LGI+V+Q 
Sbjct: 1016 LYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQE 1075

Query: 2360 RGNIFISQEKYLEDLLKRFSMSNCKLISSPAALNEKL 2470
               IFI+QE Y +++LK+F M +   + +P     KL
Sbjct: 1076 DNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKL 1112



 Score = 53.5 bits (127), Expect(2) = 3e-09
 Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +3

Query: 96  KKVRMSKSSLTRVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKF 269
           K+  +     +RV  + + ++  G+ + D +I++K+LRSL   F+H+V  IE +KDL   
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185

Query: 270 SFHELMGSLEAHEKR 314
           +  +L+GSL+A+E++
Sbjct: 186 TIEQLLGSLQAYEEK 200



 Score = 37.0 bits (84), Expect(2) = 3e-09
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +2

Query: 2   WEILQKEFGGCDEVISIKLQSLWRDFDNLTMKESENVQEF 121
           WE L+  + G D+V  ++LQ+L  +F+ L MKE E V ++
Sbjct: 95  WEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDY 134



 Score = 68.6 bits (166), Expect = 1e-08
 Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
 Frame = +1

Query: 484 HSRNFNGNSETYCYICKKYDHEAKDCRFKCNRCRNPNHSQRDC*YKTRWEENTTNFTEGN 663
           H ++    S   CY C K+ H A +C+   N+               ++EE      E  
Sbjct: 269 HPKSRYDKSSVKCYNCGKFGHYASECKAPSNK---------------KFEEKANYVEEKI 313

Query: 664 DEDQLFYSCMNAENENQDT--WYLDSGCSNHMTGNQRIFV*LDDSFYSHVKLGDGNMKKI 837
            E+ +       ++E ++   WYLDSG SNHM G + +F  LD+S   +V LGD +  ++
Sbjct: 314 QEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEV 373

Query: 838 EGKGVSVIYTK 870
           +GKG  +I  K
Sbjct: 374 KGKGNILIRLK 384


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  402 bits (1033), Expect(3) = 0.0
 Identities = 211/430 (49%), Positives = 281/430 (65%), Gaps = 7/430 (1%)
 Frame = +1

Query: 874  ERESGRNPKTLRTYRGGEFIYKEFWNYCKEKGIKRQLTVRHTQQQNGVTERKNRTIAEMA 1053
            E+ESG   KT+R+ RGGEF  KEF  YC++ GI+RQLTV  + QQNGV ERKNRTI EMA
Sbjct: 583  EKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMA 642

Query: 1054 RSMLKGKALPNQFWAEAVNMTIYILNRSPIKAVPSKTPYEAWHERKPQVKLLKVFGYPAF 1233
            RSMLK K LP + WAEAV   +Y+LNRSP K+V  KTP EAW  RKP V  L+VFG  A 
Sbjct: 643  RSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAH 702

Query: 1234 ALVPSQEREKFDEKGEKYIFIGYSDESKGFRLYSPTSKKLVVSSDVVFDEMGK*NWDDAG 1413
            A VP ++R K D+K EKYIFIGY + SKG++LY+P +KK ++S ++VFDE G+ +W+   
Sbjct: 703  AHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNE 762

Query: 1414 SSQS-SRAIEFYEPEANQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRKIRSMSD 1590
               +     E  EPE  +E+                                R I+ + +
Sbjct: 763  EDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRF---RSIQELYE 819

Query: 1591 VYENC-NLALF-----SEPQSFNEAVQDEKWKRAMDDKITIIEKNSTWKLVDLPEGNDVI 1752
            V EN  NL LF      EP  F +A++ + W+ AMD++I  I+KN TW+L  LP G+  I
Sbjct: 820  VTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAI 879

Query: 1753 SLKRVYKTKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVVRMEIIRVVLALAAQME 1932
             +K VYK K    G +++ KA LVAK YSQ+ G+D++  FAPV R+E +R++++LAAQ +
Sbjct: 880  GVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNK 939

Query: 1933 LPVFQLDVKSAFLNGDLEEEVYVEQTLGYVKEGAENKVYKLQKVLYGLKQAPRTWNSKID 2112
              + Q+DVKSAFLNGDLEEEVY+EQ  GY+ +G E+KV +L+KVLYGLKQAPR WN++ID
Sbjct: 940  WKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRID 999

Query: 2113 GYFQQTGFSK 2142
             YF++  F K
Sbjct: 1000 KYFKEKDFIK 1009



 Score =  233 bits (593), Expect(3) = 0.0
 Identities = 110/229 (48%), Positives = 149/229 (65%)
 Frame = +3

Query: 2490 VDEKVYQCLVGSLLYLTHTRLYIMYTVSLLSRFLSEPSKLHLAAAKRVLRYLQGTKSFGL 2669
            VD   ++ LVGSL YLT TR  I+Y V ++SR++  P+  H  AAKR+LRY++GT +FGL
Sbjct: 1121 VDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGL 1180

Query: 2670 KYVKEEVNSLIGFTDSYWAGSLDDRKSTSGYAFCLGSKLIAWSSKKQKTVALSSVEAEYI 2849
             Y       L+G++DS W G +DDRKSTSG+ F +G     W SKKQ  V LS+ EAEY+
Sbjct: 1181 HYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYV 1240

Query: 2850 VAMDAVCEGVWLRRILKDLQQEVKTPTTIFCDNMFAIVMTKNPVFHSRTKHIELRYHYIR 3029
             A   VC  +WLR +LK+L    + PT IF DN  AI + KNPVFH R+KHI+ RYHYIR
Sbjct: 1241 AATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIR 1300

Query: 3030 HKVEKKKVELKFINTNEQLTDMLTKAVSMDKFVRARDTMNVAAS*QEGG 3176
              V KK V+L+++ T++Q+ D  TK +  + F++ R  + VA S   GG
Sbjct: 1301 ECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKSSLRGG 1349



 Score = 99.4 bits (246), Expect(3) = 0.0
 Identities = 45/97 (46%), Positives = 68/97 (70%)
 Frame = +2

Query: 2180 LYIKKEGNELLIVCLYVDDLIYTSTSMKMLQDFKEAMMKEYEMTDLGLMKYFLGIQVQQS 2359
            LYIK +  ++LI CLYVDDLI+T  +  + ++FK+ M KE+EMTD+GLM Y+LGI+V+Q 
Sbjct: 1016 LYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQE 1075

Query: 2360 RGNIFISQEKYLEDLLKRFSMSNCKLISSPAALNEKL 2470
               IFI+QE Y +++LK+F + +   + +P     KL
Sbjct: 1076 DNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKL 1112



 Score = 53.5 bits (127), Expect(2) = 3e-09
 Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +3

Query: 96  KKVRMSKSSLTRVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKF 269
           K+  +     +RV  + + ++  G+ + D +I++K+LRSL   F+H+V  IE +KDL   
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185

Query: 270 SFHELMGSLEAHEKR 314
           +  +L+GSL+A+E++
Sbjct: 186 TIEQLLGSLQAYEEK 200



 Score = 37.0 bits (84), Expect(2) = 3e-09
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +2

Query: 2   WEILQKEFGGCDEVISIKLQSLWRDFDNLTMKESENVQEF 121
           WE L+  + G D+V  ++LQ+L  +F+ L MKE E V ++
Sbjct: 95  WEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDY 134



 Score = 67.8 bits (164), Expect = 2e-08
 Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
 Frame = +1

Query: 484 HSRNFNGNSETYCYICKKYDHEAKDCRFKCNRCRNPNHSQRDC*YKTRWEENTTNFTEGN 663
           H ++    S   CY C K+ H A +C+   N+               ++EE      E  
Sbjct: 269 HPKSRYDKSSVKCYNCGKFGHYASECKAPSNK---------------KFEEKAHYVEEKI 313

Query: 664 DEDQLFYSCMNAENENQDT--WYLDSGCSNHMTGNQRIFV*LDDSFYSHVKLGDGNMKKI 837
            E+ +       ++E ++   WYLDSG SNHM G + +F  LD+S   +V LGD +  ++
Sbjct: 314 QEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEV 373

Query: 838 EGKGVSVIYTK 870
           +GKG  +I  K
Sbjct: 374 KGKGNILIRLK 384