BLASTX nr result
ID: Coptis24_contig00005336
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00005336 (3809 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABA95820.1| retrotransposon protein, putative, unclassified [... 408 0.0 gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 392 0.0 emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 407 0.0 gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 402 0.0 emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 402 0.0 >gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1142 Score = 408 bits (1049), Expect(3) = 0.0 Identities = 217/449 (48%), Positives = 290/449 (64%), Gaps = 23/449 (5%) Frame = +1 Query: 874 ERESGRNPKTLRTYRGGEFIYKEFWNYCKEKGIKRQLTVRHTQQQNGVTERKNRTIAEMA 1053 E +S R K LR+ +GGE+I KEF YC+ GI+RQLT ++ QQNGV ERKNRTI +MA Sbjct: 363 ENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTAGYSTQQNGVAERKNRTINDMA 422 Query: 1054 RSMLKGKALPNQFWAEAVNMTIYILNRSPIKAVPSKTPYEAWHERKPQVKLLKVFGYPAF 1233 SML+ K +P FWAEAVN IYILNRSP KAVP++TP+EAW+ +KP + ++VFG + Sbjct: 423 NSMLQDKGMPKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICY 482 Query: 1234 ALVPSQEREKFDEKGEKYIFIGYSDESKGFRLYSPTSKKLVVSSDVVFDEMGK*NWDDAG 1413 A VP+Q+R KFD K ++ IF+GY+D KG+RLY+ KK+++ DV+FDE NW Sbjct: 483 AQVPAQKRVKFDNKSDRCIFVGYADGIKGYRLYNLEKKKIIIIRDVIFDESATWNWKSPE 542 Query: 1414 SSQS----SRAIEFYEPEANQ----EDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-- 1563 +S + + I +P + ED P Sbjct: 543 ASSTPLLPTTTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPES 602 Query: 1564 -PRKIRSM------------SDVYENCNLALFSEPQSFNEAVQDEKWKRAMDDKITIIEK 1704 PR++RSM S+ +E CN ++ EPQSF EA + + W +AM+D+I +IEK Sbjct: 603 APRRVRSMVELLESTSQQRGSEQHEFCNYSVV-EPQSFQEAEKHDNWIKAMEDEIHMIEK 661 Query: 1705 NSTWKLVDLPEGNDVISLKRVYKTKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVV 1884 N+TW+LVD P +VI +K VYKTK DGS+QK KA LVAK + Q+PG+D+ T+APV Sbjct: 662 NNTWELVDRPRDREVIGVKWVYKTKLNLDGSVQKYKARLVAKGFKQKPGIDYYETYAPVA 721 Query: 1885 RMEIIRVVLALAAQMELPVFQLDVKSAFLNGDLEEEVYVEQTLGYVKEGAENKVYKLQKV 2064 R+E IR ++ALAAQ ++QLDVKSAFLNG L+EE+YVEQ G+ +G ENKV++L+K Sbjct: 722 RLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKA 781 Query: 2065 LYGLKQAPRTWNSKIDGYFQQTGFSKSRS 2151 LYGLKQAPR W S+ID YF Q GF+KS S Sbjct: 782 LYGLKQAPRVWYSQIDKYFIQKGFAKSIS 810 Score = 262 bits (669), Expect(3) = 0.0 Identities = 129/226 (57%), Positives = 171/226 (75%) Frame = +3 Query: 2475 DGALKVDEKVYQCLVGSLLYLTHTRLYIMYTVSLLSRFLSEPSKLHLAAAKRVLRYLQGT 2654 DGA KVD +Y+ LVGSLLYLT TR IM+ SLLSR++S PS+L+ AAKRVLRY++GT Sbjct: 914 DGADKVDPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGT 973 Query: 2655 KSFGLKYVKEEVNSLIGFTDSYWAGSLDDRKSTSGYAFCLGSKLIAWSSKKQKTVALSSV 2834 +G+ Y + + LIG+TDS WAG LDD K TSGYAF LGS + +WS+KKQ VALSS Sbjct: 974 ADYGIWYKPVKESKLIGYTDSDWAGCLDDMKGTSGYAFSLGSGMCSWSTKKQNIVALSSA 1033 Query: 2835 EAEYIVAMDAVCEGVWLRRILKDLQQEVKTPTTIFCDNMFAIVMTKNPVFHSRTKHIELR 3014 EAEY+ A AV + VWLRRI++DL ++ PTTI+CD+ AI +++NPV H RTKHI ++ Sbjct: 1034 EAEYVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIK 1093 Query: 3015 YHYIRHKVEKKKVELKFINTNEQLTDMLTKAVSMDKFVRARDTMNV 3152 YHYIR V++++V+L+F T+EQL D+ TKA+S +KFVR R+ + V Sbjct: 1094 YHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFVRDRELIGV 1139 Score = 124 bits (310), Expect(3) = 0.0 Identities = 59/98 (60%), Positives = 74/98 (75%) Frame = +2 Query: 2180 LYIKKEGNELLIVCLYVDDLIYTSTSMKMLQDFKEAMMKEYEMTDLGLMKYFLGIQVQQS 2359 LY+ K G ++LIV LYVDDLIYT S KM+QDFK+ MM YEM+DLGL+ YFLG++V QS Sbjct: 814 LYVNKTGTDILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLYYFLGMEVHQS 873 Query: 2360 RGNIFISQEKYLEDLLKRFSMSNCKLISSPAALNEKLK 2473 IFISQ KY E++LK+F M NCK +++P NEK K Sbjct: 874 DEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQK 911 Score = 73.2 bits (178), Expect(2) = 4e-18 Identities = 40/87 (45%), Positives = 61/87 (70%), Gaps = 2/87 (2%) Frame = +3 Query: 96 KKVRMSKSSLTRVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKF 269 K+ K +RV EIV+Q+R G+ I D+K+V+KIL SLP ++++VAAIE SKDLS Sbjct: 122 KESEKVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTL 181 Query: 270 SFHELMGSLEAHEKRLNRFANSSLQSS 350 + +LM SLE+HE+R + SS++++ Sbjct: 182 TIQQLMSSLESHEERKLQREGSSIENA 208 Score = 47.4 bits (111), Expect(2) = 4e-18 Identities = 20/40 (50%), Positives = 31/40 (77%) Frame = +2 Query: 2 WEILQKEFGGCDEVISIKLQSLWRDFDNLTMKESENVQEF 121 W+ L++EF G +V+++KLQ+L R F NL MKESE V+++ Sbjct: 91 WDKLKEEFQGSQKVLAVKLQTLRRQFQNLLMKESEKVKDY 130 Score = 56.6 bits (135), Expect(2) = 2e-07 Identities = 23/52 (44%), Positives = 37/52 (71%) Frame = +3 Query: 3552 ATTSVPIFDGEHYDYWSI*MKTIFISQDLWELVQDGYAEGGSAKILKRNQRE 3707 A + VP+F GE+YD WSI M+T+ +SQ LW++V++GY E + + L Q++ Sbjct: 2 AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKK 53 Score = 28.1 bits (61), Expect(2) = 2e-07 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +2 Query: 3719 LQFIHQGVSKSIFP*TMGASKSK 3787 L I QGV++S+FP +GA KSK Sbjct: 66 LFLIQQGVAESLFPRIIGAKKSK 88 >gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1333 Score = 392 bits (1007), Expect(3) = 0.0 Identities = 216/435 (49%), Positives = 275/435 (63%), Gaps = 11/435 (2%) Frame = +1 Query: 874 ERESGRNPKTLRTYRGGEFIYKEFWNYCKEKGIKRQLTVRHTQQQNGVTERKNRTIAEMA 1053 E +SG K+LRT RGGEF+ +F +C+E GI+R+LT +T +QNGV ERKNRT+ EMA Sbjct: 559 ENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRELTAPYTPEQNGVAERKNRTVVEMA 618 Query: 1054 RSMLKGKALPNQFWAEAVNMTIYILNRSPIKAVPSKTPYEAWHERKPQVKLLKVFGYPAF 1233 RS LK K LP+ FW EAV +Y LN SP K V + TP EAW+ +KP+V L++FG A+ Sbjct: 619 RSSLKAKGLPDYFWGEAVATVVYFLNISPTKDVWNTTPLEAWNGKKPRVSHLRIFGCIAY 678 Query: 1234 ALVPSQEREKFDEKGEKYIFIGYSDESKGFRLYSPTSKKLVVSSDVVFDEMGK*NWDDAG 1413 ALV K DEK K IF+GYS +SK +RLY+P S K+++S +VVF+E N++ Sbjct: 679 ALV--NFHSKLDEKSTKCIFVGYSLQSKAYRLYNPISGKVIISRNVVFNEDVSWNFNSGN 736 Query: 1414 SSQSSRAIEFYEPEANQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRKIRSMSD- 1590 + + + E A P RS + Sbjct: 737 MMSNIQLLPTDEESAVDFGNSPNSSPVSSSVSSPIAPSTTVAPDESSVEPIPLRRSTREK 796 Query: 1591 ---------VYENCNLALF-SEPQSFNEAVQDEKWKRAMDDKITIIEKNSTWKLVDLPEG 1740 V +C AL S+P + EAV+ +WK AM ++I IE+NSTW+LVD PEG Sbjct: 797 KPNPKYSNTVNTSCQFALLVSDPICYEEAVEQSEWKNAMIEEIQAIERNSTWELVDAPEG 856 Query: 1741 NDVISLKRVYKTKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVVRMEIIRVVLALA 1920 +VI LK V++TK+ DGSIQK KA LVAK YSQQ GVDF+ TF+PV R E +RVVLALA Sbjct: 857 KNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQQGVDFDETFSPVARFETVRVVLALA 916 Query: 1921 AQMELPVFQLDVKSAFLNGDLEEEVYVEQTLGYVKEGAENKVYKLQKVLYGLKQAPRTWN 2100 AQ+ LPV+Q DVKSAFLNGDLEEEVYV Q G++ G ENKVYKL+K LYGLKQAPR W Sbjct: 917 AQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMITGNENKVYKLRKALYGLKQAPRAWY 976 Query: 2101 SKIDGYFQQTGFSKS 2145 SKID +FQ +GF +S Sbjct: 977 SKIDSFFQGSGFRRS 991 Score = 226 bits (575), Expect(3) = 0.0 Identities = 119/236 (50%), Positives = 153/236 (64%) Frame = +3 Query: 2475 DGALKVDEKVYQCLVGSLLYLTHTRLYIMYTVSLLSRFLSEPSKLHLAAAKRVLRYLQGT 2654 DG K + K+++ LVG L YLTHTR I ++VS++SRFL P+K H AAKRVLRY+ GT Sbjct: 1098 DGTEKANPKLFRSLVGGLNYLTHTRPDIAFSVSVVSRFLQSPTKQHFGAAKRVLRYVAGT 1157 Query: 2655 KSFGLKYVKEEVNSLIGFTDSYWAGSLDDRKSTSGYAFCLGSKLIAWSSKKQKTVALSSV 2834 FG+ Y K L+GFTDS +AG LDDRKSTSG F GS ++ WSSKKQ+TVALS+ Sbjct: 1158 TDFGIWYSKAPNFRLVGFTDSDYAGCLDDRKSTSGSCFSFGSGVVTWSSKKQETVALSTS 1217 Query: 2835 EAEYIVAMDAVCEGVWLRRILKDLQQEVKTPTTIFCDNMFAIVMTKNPVFHSRTKHIELR 3014 EAEY A A + +WLR++L+D E K T IF D+ AI M KNP FH RTKHI+++ Sbjct: 1218 EAEYTAASLAARQALWLRKLLEDFSYEQKESTEIFSDSKSAIAMAKNPSFHGRTKHIDVQ 1277 Query: 3015 YHYIRHKVEKKKVELKFINTNEQLTDMLTKAVSMDKFVRARDTMNVAAS*QEGGAS 3182 YH+IR V ++ LKF +TNEQ D+ TK++ K R + V G S Sbjct: 1278 YHFIRTLVADGRIVLKFCSTNEQAADIFTKSLPQAKHEYFRLQLGVCDFESRGSVS 1333 Score = 123 bits (308), Expect(3) = 0.0 Identities = 56/99 (56%), Positives = 79/99 (79%), Gaps = 1/99 (1%) Frame = +2 Query: 2180 LYIKKEG-NELLIVCLYVDDLIYTSTSMKMLQDFKEAMMKEYEMTDLGLMKYFLGIQVQQ 2356 LY+KK+G +E L+VCLYVDD+IY +S ++ DFK MM+ +EM+DLGL+KYFLG++V Q Sbjct: 997 LYLKKQGTDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQ 1056 Query: 2357 SRGNIFISQEKYLEDLLKRFSMSNCKLISSPAALNEKLK 2473 + IFISQ+KY EDLLK+F M NC++ ++P +NEKL+ Sbjct: 1057 DKDGIFISQKKYAEDLLKKFQMMNCEVATTPMNINEKLQ 1095 Score = 77.4 bits (189), Expect(2) = 5e-20 Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 2/84 (2%) Frame = +3 Query: 123 LTRVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKFSFHELMGSL 296 L+R + IV+++RS G+ I ++ +V K+LRSL F+HVV AIE SKDLS +SF ELM SL Sbjct: 130 LSRTSAIVNRMRSYGEKIDNQIVVSKVLRSLTTKFEHVVTAIEESKDLSTYSFDELMSSL 189 Query: 297 EAHEKRLNRFANSSLQSSMNVDGE 368 AHE RLNR + + V GE Sbjct: 190 LAHEDRLNRSREKVQEKAFQVKGE 213 Score = 49.7 bits (117), Expect(2) = 5e-20 Identities = 22/40 (55%), Positives = 33/40 (82%) Frame = +2 Query: 2 WEILQKEFGGCDEVISIKLQSLWRDFDNLTMKESENVQEF 121 WEIL++E+ G D+VI++KLQ+L RDF+ L M E+E+VQ + Sbjct: 90 WEILKQEYFGDDKVITVKLQTLRRDFETLFMNENESVQGY 129 Score = 75.9 bits (185), Expect = 8e-11 Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 1/101 (0%) Frame = +1 Query: 568 KCNRCRNPNHSQRDC*YKTRWEENTTNFTEG-NDEDQLFYSCMNAENENQDTWYLDSGCS 744 +C C+ H + DC K + E+ NFT+ +E +LF + W++DSGCS Sbjct: 259 QCRYCKKFGHKEVDCWTKQKDEQKDANFTQNVEEESKLFMASSQITESANAVWFIDSGCS 318 Query: 745 NHMTGNQRIFV*LDDSFYSHVKLGDGNMKKIEGKGVSVIYT 867 NHM+ ++ +F LD+S S V+LGD IEGKG I T Sbjct: 319 NHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKT 359 >emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] Length = 1430 Score = 407 bits (1046), Expect(3) = 0.0 Identities = 212/429 (49%), Positives = 275/429 (64%), Gaps = 3/429 (0%) Frame = +1 Query: 874 ERESGRNPKTLRTYRGGEFIYKEFWNYCKEKGIKRQLTVRHTQQQNGVTERKNRTIAEMA 1053 E++SG+ K LRT R GEF+ +F +C+E+G+ R+LT ++ +QNGV ERKNRT+ EMA Sbjct: 665 EKQSGKCIKVLRTDRXGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMA 724 Query: 1054 RSMLKGKALPNQFWAEAVNMTIYILNRSPIKAVPSKTPYEAWHERKPQVKLLKVFGYPAF 1233 RSM+ K L N FWAE V +Y+LN SP KAV ++TPYEAW+ RKP V LKVFG A+ Sbjct: 725 RSMMXAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAY 784 Query: 1234 ALVPSQEREKFDEKGEKYIFIGYSDESKGFRLYSPTSKKLVVSSDVVFDEMGK*NW---D 1404 L S R K DEK K IFIGY +SKG++LY+P S K++VS +VVFDE W + Sbjct: 785 TLXBSHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASXTWRVSE 844 Query: 1405 DAGSSQSSRAIEFYEPEANQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRKIRSM 1584 D + S E + E Q PPRK RS+ Sbjct: 845 DGALVEISSESEMAQSEDQQPSVQIPXSPTPSHSPSSPNLSXSSSSQSSEETPPRKFRSL 904 Query: 1585 SDVYENCNLALFSEPQSFNEAVQDEKWKRAMDDKITIIEKNSTWKLVDLPEGNDVISLKR 1764 D+YE + ++P +F EAV+ E+W AM ++I IEKN TW+LV+LPE +VI +K Sbjct: 905 RDIYETTQVLFVADPTTFEEAVEKEEWCSAMKEEIAAIEKNETWELVELPEDKNVIGVKW 964 Query: 1765 VYKTKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVVRMEIIRVVLALAAQMELPVF 1944 V++TK++ DGSIQK KA LVAK Y+QQ GVD++ TF+PV R E +R +LALAA M V+ Sbjct: 965 VFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRTLLALAAHMHWCVY 1024 Query: 1945 QLDVKSAFLNGDLEEEVYVEQTLGYVKEGAENKVYKLQKVLYGLKQAPRTWNSKIDGYFQ 2124 Q DVKSAFLNG+L EEVY Q G++ E VY+L+ LYGLKQAPR W SKID YF Sbjct: 1025 QFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLKXALYGLKQAPRAWYSKIDSYFV 1084 Query: 2125 QTGFSKSRS 2151 + GF KS+S Sbjct: 1085 ENGFEKSKS 1093 Score = 215 bits (548), Expect(3) = 0.0 Identities = 117/251 (46%), Positives = 152/251 (60%) Frame = +3 Query: 2475 DGALKVDEKVYQCLVGSLLYLTHTRLYIMYTVSLLSRFLSEPSKLHLAAAKRVLRYLQGT 2654 DG + D + ++ LVG L+YLTHTR I + V ++SRF+ PSK HL A KR+LRY+ GT Sbjct: 1198 DGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHLGATKRLLRYIAGT 1257 Query: 2655 KSFGLKYVKEEVNSLIGFTDSYWAGSLDDRKSTSGYAFCLGSKLIAWSSKKQKTVALSSV 2834 F + + L+G+TDS WAG L+DRKSTSGY F LGS Sbjct: 1258 YDFRIWXGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGS------------------ 1299 Query: 2835 EAEYIVAMDAVCEGVWLRRILKDLQQEVKTPTTIFCDNMFAIVMTKNPVFHSRTKHIELR 3014 AEY VA + C+ VWLRRIL D+ QE + PT I+CDN AI MTKNP +H RTKH+++R Sbjct: 1300 -AEYTVATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIR 1358 Query: 3015 YHYIRHKVEKKKVELKFINTNEQLTDMLTKAVSMDKFVRARDTMNVAAS*QEGGASELKI 3194 H+IR V + KV L++ NTNEQ+ D+LTKA+S DK V R + V Sbjct: 1359 VHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLGVCN------------ 1406 Query: 3195 FKIRGSVENEF 3227 F+ R SVE+ F Sbjct: 1407 FESRRSVEDGF 1417 Score = 115 bits (289), Expect(3) = 0.0 Identities = 51/99 (51%), Positives = 77/99 (77%), Gaps = 1/99 (1%) Frame = +2 Query: 2180 LYIKKEG-NELLIVCLYVDDLIYTSTSMKMLQDFKEAMMKEYEMTDLGLMKYFLGIQVQQ 2356 LY+K++G N+LLI+CLYVDD+IY +S ++ +FK M K++EM+DLGL+ +FLG++V+Q Sbjct: 1097 LYLKRQGKNDLLIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQ 1156 Query: 2357 SRGNIFISQEKYLEDLLKRFSMSNCKLISSPAALNEKLK 2473 +F+SQ KY DLLK+F+M NCK+++ P NEKL+ Sbjct: 1157 VEDGVFVSQRKYAVDLLKKFNMLNCKVVAIPMNSNEKLQ 1195 Score = 132 bits (333), Expect = 6e-28 Identities = 71/172 (41%), Positives = 96/172 (55%), Gaps = 6/172 (3%) Frame = +3 Query: 2601 SKLHLAAAKRVLRYLQGTKSFGLKYVKEEVNSLIGFTDSYWAGSLDDRKSTSGYAFCLGS 2780 SK HL AA R+LRY+ GT F + Y + L+G+TDS WAG Sbjct: 5 SKQHLGAAXRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGX---------------- 48 Query: 2781 KLIAWSSKKQKTVALSSVEAEYIVAMDAVCEGVWLRRILKDLQQEVKTPTTIFCDNMFAI 2960 + W SKKQ LSS EAEY + C+ VWLRRIL D+ QE + T I+CDN AI Sbjct: 49 --VCWXSKKQAVTXLSSSEAEYTAXTSSACQAVWLRRILXDINQEHEEXTVIYCDNKAAI 106 Query: 2961 VMTKNPVFHSRTKHIELRYHYIRHKV------EKKKVELKFINTNEQLTDML 3098 MTKNP +H RTKH+++R H+IR V E +++K + ++ L D++ Sbjct: 107 AMTKNPAYHGRTKHVDIRVHFIRDLVVEGECYEFWSIKMKTLFKSQDLWDLV 158 Score = 80.9 bits (198), Expect(2) = 2e-19 Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 2/84 (2%) Frame = +3 Query: 123 LTRVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKFSFHELMGSL 296 L+RVA IV+Q+RS G+ I D+ +V K+LRSL FDHVVA IE SKDLS +SF ELMGSL Sbjct: 247 LSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAXIEESKDLSTYSFDELMGSL 306 Query: 297 EAHEKRLNRFANSSLQSSMNVDGE 368 ++HE RL+ + + + GE Sbjct: 307 QSHEVRLSXTEDKNEEKXFYTKGE 330 Score = 44.3 bits (103), Expect(2) = 2e-19 Identities = 20/40 (50%), Positives = 27/40 (67%) Frame = +2 Query: 2 WEILQKEFGGCDEVISIKLQSLWRDFDNLTMKESENVQEF 121 W L+ F G +VI++KLQSL RDF+ L MK E+ Q+F Sbjct: 207 WTTLETAFQGSSKVITVKLQSLRRDFETLHMKNGESXQDF 246 Score = 72.8 bits (177), Expect = 7e-10 Identities = 36/97 (37%), Positives = 52/97 (53%) Frame = +1 Query: 571 CNRCRNPNHSQRDC*YKTRWEENTTNFTEGNDEDQLFYSCMNAENENQDTWYLDSGCSNH 750 C C+ H Q +C K R E+ + D+ +LF + + + W+LDSGCSNH Sbjct: 383 CYYCKRFGHVQAECWKKERQEKQANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNH 442 Query: 751 MTGNQRIFV*LDDSFYSHVKLGDGNMKKIEGKGVSVI 861 MTG + +F LD+S VKLGD ++EGKG + Sbjct: 443 MTGIKSLFKELDESHKLXVKLGDDXQVQVEGKGTVAV 479 >gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana] Length = 1352 Score = 402 bits (1033), Expect(3) = 0.0 Identities = 211/430 (49%), Positives = 281/430 (65%), Gaps = 7/430 (1%) Frame = +1 Query: 874 ERESGRNPKTLRTYRGGEFIYKEFWNYCKEKGIKRQLTVRHTQQQNGVTERKNRTIAEMA 1053 E+ESG KT+R+ RGGEF KEF YC++ GI+RQLTV + QQNGV ERKNRTI EMA Sbjct: 583 EKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMA 642 Query: 1054 RSMLKGKALPNQFWAEAVNMTIYILNRSPIKAVPSKTPYEAWHERKPQVKLLKVFGYPAF 1233 RSMLK K LP + WAEAV +Y+LNRSP K+V KTP EAW RKP V L+VFG A Sbjct: 643 RSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAH 702 Query: 1234 ALVPSQEREKFDEKGEKYIFIGYSDESKGFRLYSPTSKKLVVSSDVVFDEMGK*NWDDAG 1413 A VP ++R K D+K EKYIFIGY + SKG++LY+P +KK ++S ++VFDE G+ +W+ Sbjct: 703 AHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNE 762 Query: 1414 SSQS-SRAIEFYEPEANQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRKIRSMSD 1590 + E EPE +E+ R I+ + + Sbjct: 763 EDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRF---RSIQELYE 819 Query: 1591 VYENC-NLALF-----SEPQSFNEAVQDEKWKRAMDDKITIIEKNSTWKLVDLPEGNDVI 1752 V EN NL LF EP F +A++ + W+ AMD++I I+KN TW+L LP G+ I Sbjct: 820 VTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAI 879 Query: 1753 SLKRVYKTKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVVRMEIIRVVLALAAQME 1932 +K VYK K G +++ KA LVAK YSQ+ G+D++ FAPV R+E +R++++LAAQ + Sbjct: 880 GVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNK 939 Query: 1933 LPVFQLDVKSAFLNGDLEEEVYVEQTLGYVKEGAENKVYKLQKVLYGLKQAPRTWNSKID 2112 + Q+DVKSAFLNGDLEEEVY+EQ GY+ +G E+KV +L+KVLYGLKQAPR WN++ID Sbjct: 940 WKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRID 999 Query: 2113 GYFQQTGFSK 2142 YF++ F K Sbjct: 1000 KYFKEKDFIK 1009 Score = 233 bits (593), Expect(3) = 0.0 Identities = 110/229 (48%), Positives = 149/229 (65%) Frame = +3 Query: 2490 VDEKVYQCLVGSLLYLTHTRLYIMYTVSLLSRFLSEPSKLHLAAAKRVLRYLQGTKSFGL 2669 VD ++ LVGSL YLT TR I+Y V ++SR++ P+ H AAKR+LRY++GT +FGL Sbjct: 1121 VDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGL 1180 Query: 2670 KYVKEEVNSLIGFTDSYWAGSLDDRKSTSGYAFCLGSKLIAWSSKKQKTVALSSVEAEYI 2849 Y L+G++DS W G +DDRKSTSG+ F +G W SKKQ V LS+ EAEY+ Sbjct: 1181 HYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYV 1240 Query: 2850 VAMDAVCEGVWLRRILKDLQQEVKTPTTIFCDNMFAIVMTKNPVFHSRTKHIELRYHYIR 3029 A VC +WLR +LK+L + PT IF DN AI + KNPVFH R+KHI+ RYHYIR Sbjct: 1241 AATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIR 1300 Query: 3030 HKVEKKKVELKFINTNEQLTDMLTKAVSMDKFVRARDTMNVAAS*QEGG 3176 V KK V+L+++ T++Q+ D TK + + F++ R + VA S GG Sbjct: 1301 ECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKSSLRGG 1349 Score = 100 bits (250), Expect(3) = 0.0 Identities = 46/97 (47%), Positives = 68/97 (70%) Frame = +2 Query: 2180 LYIKKEGNELLIVCLYVDDLIYTSTSMKMLQDFKEAMMKEYEMTDLGLMKYFLGIQVQQS 2359 LYIK + ++LI CLYVDDLI+T + + ++FK+ M KE+EMTD+GLM Y+LGI+V+Q Sbjct: 1016 LYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQE 1075 Query: 2360 RGNIFISQEKYLEDLLKRFSMSNCKLISSPAALNEKL 2470 IFI+QE Y +++LK+F M + + +P KL Sbjct: 1076 DNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKL 1112 Score = 53.5 bits (127), Expect(2) = 3e-09 Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Frame = +3 Query: 96 KKVRMSKSSLTRVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKF 269 K+ + +RV + + ++ G+ + D +I++K+LRSL F+H+V IE +KDL Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185 Query: 270 SFHELMGSLEAHEKR 314 + +L+GSL+A+E++ Sbjct: 186 TIEQLLGSLQAYEEK 200 Score = 37.0 bits (84), Expect(2) = 3e-09 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = +2 Query: 2 WEILQKEFGGCDEVISIKLQSLWRDFDNLTMKESENVQEF 121 WE L+ + G D+V ++LQ+L +F+ L MKE E V ++ Sbjct: 95 WEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDY 134 Score = 68.6 bits (166), Expect = 1e-08 Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 2/131 (1%) Frame = +1 Query: 484 HSRNFNGNSETYCYICKKYDHEAKDCRFKCNRCRNPNHSQRDC*YKTRWEENTTNFTEGN 663 H ++ S CY C K+ H A +C+ N+ ++EE E Sbjct: 269 HPKSRYDKSSVKCYNCGKFGHYASECKAPSNK---------------KFEEKANYVEEKI 313 Query: 664 DEDQLFYSCMNAENENQDT--WYLDSGCSNHMTGNQRIFV*LDDSFYSHVKLGDGNMKKI 837 E+ + ++E ++ WYLDSG SNHM G + +F LD+S +V LGD + ++ Sbjct: 314 QEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEV 373 Query: 838 EGKGVSVIYTK 870 +GKG +I K Sbjct: 374 KGKGNILIRLK 384 >emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] Length = 1352 Score = 402 bits (1033), Expect(3) = 0.0 Identities = 211/430 (49%), Positives = 281/430 (65%), Gaps = 7/430 (1%) Frame = +1 Query: 874 ERESGRNPKTLRTYRGGEFIYKEFWNYCKEKGIKRQLTVRHTQQQNGVTERKNRTIAEMA 1053 E+ESG KT+R+ RGGEF KEF YC++ GI+RQLTV + QQNGV ERKNRTI EMA Sbjct: 583 EKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMA 642 Query: 1054 RSMLKGKALPNQFWAEAVNMTIYILNRSPIKAVPSKTPYEAWHERKPQVKLLKVFGYPAF 1233 RSMLK K LP + WAEAV +Y+LNRSP K+V KTP EAW RKP V L+VFG A Sbjct: 643 RSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAH 702 Query: 1234 ALVPSQEREKFDEKGEKYIFIGYSDESKGFRLYSPTSKKLVVSSDVVFDEMGK*NWDDAG 1413 A VP ++R K D+K EKYIFIGY + SKG++LY+P +KK ++S ++VFDE G+ +W+ Sbjct: 703 AHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNE 762 Query: 1414 SSQS-SRAIEFYEPEANQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRKIRSMSD 1590 + E EPE +E+ R I+ + + Sbjct: 763 EDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRF---RSIQELYE 819 Query: 1591 VYENC-NLALF-----SEPQSFNEAVQDEKWKRAMDDKITIIEKNSTWKLVDLPEGNDVI 1752 V EN NL LF EP F +A++ + W+ AMD++I I+KN TW+L LP G+ I Sbjct: 820 VTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAI 879 Query: 1753 SLKRVYKTKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVVRMEIIRVVLALAAQME 1932 +K VYK K G +++ KA LVAK YSQ+ G+D++ FAPV R+E +R++++LAAQ + Sbjct: 880 GVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNK 939 Query: 1933 LPVFQLDVKSAFLNGDLEEEVYVEQTLGYVKEGAENKVYKLQKVLYGLKQAPRTWNSKID 2112 + Q+DVKSAFLNGDLEEEVY+EQ GY+ +G E+KV +L+KVLYGLKQAPR WN++ID Sbjct: 940 WKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRID 999 Query: 2113 GYFQQTGFSK 2142 YF++ F K Sbjct: 1000 KYFKEKDFIK 1009 Score = 233 bits (593), Expect(3) = 0.0 Identities = 110/229 (48%), Positives = 149/229 (65%) Frame = +3 Query: 2490 VDEKVYQCLVGSLLYLTHTRLYIMYTVSLLSRFLSEPSKLHLAAAKRVLRYLQGTKSFGL 2669 VD ++ LVGSL YLT TR I+Y V ++SR++ P+ H AAKR+LRY++GT +FGL Sbjct: 1121 VDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGL 1180 Query: 2670 KYVKEEVNSLIGFTDSYWAGSLDDRKSTSGYAFCLGSKLIAWSSKKQKTVALSSVEAEYI 2849 Y L+G++DS W G +DDRKSTSG+ F +G W SKKQ V LS+ EAEY+ Sbjct: 1181 HYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYV 1240 Query: 2850 VAMDAVCEGVWLRRILKDLQQEVKTPTTIFCDNMFAIVMTKNPVFHSRTKHIELRYHYIR 3029 A VC +WLR +LK+L + PT IF DN AI + KNPVFH R+KHI+ RYHYIR Sbjct: 1241 AATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIR 1300 Query: 3030 HKVEKKKVELKFINTNEQLTDMLTKAVSMDKFVRARDTMNVAAS*QEGG 3176 V KK V+L+++ T++Q+ D TK + + F++ R + VA S GG Sbjct: 1301 ECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKSSLRGG 1349 Score = 99.4 bits (246), Expect(3) = 0.0 Identities = 45/97 (46%), Positives = 68/97 (70%) Frame = +2 Query: 2180 LYIKKEGNELLIVCLYVDDLIYTSTSMKMLQDFKEAMMKEYEMTDLGLMKYFLGIQVQQS 2359 LYIK + ++LI CLYVDDLI+T + + ++FK+ M KE+EMTD+GLM Y+LGI+V+Q Sbjct: 1016 LYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQE 1075 Query: 2360 RGNIFISQEKYLEDLLKRFSMSNCKLISSPAALNEKL 2470 IFI+QE Y +++LK+F + + + +P KL Sbjct: 1076 DNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKL 1112 Score = 53.5 bits (127), Expect(2) = 3e-09 Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Frame = +3 Query: 96 KKVRMSKSSLTRVAEIVDQIRSLGDTIQDKKIVKKILRSLP--FDHVVAAIE*SKDLSKF 269 K+ + +RV + + ++ G+ + D +I++K+LRSL F+H+V IE +KDL Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185 Query: 270 SFHELMGSLEAHEKR 314 + +L+GSL+A+E++ Sbjct: 186 TIEQLLGSLQAYEEK 200 Score = 37.0 bits (84), Expect(2) = 3e-09 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = +2 Query: 2 WEILQKEFGGCDEVISIKLQSLWRDFDNLTMKESENVQEF 121 WE L+ + G D+V ++LQ+L +F+ L MKE E V ++ Sbjct: 95 WEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDY 134 Score = 67.8 bits (164), Expect = 2e-08 Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 2/131 (1%) Frame = +1 Query: 484 HSRNFNGNSETYCYICKKYDHEAKDCRFKCNRCRNPNHSQRDC*YKTRWEENTTNFTEGN 663 H ++ S CY C K+ H A +C+ N+ ++EE E Sbjct: 269 HPKSRYDKSSVKCYNCGKFGHYASECKAPSNK---------------KFEEKAHYVEEKI 313 Query: 664 DEDQLFYSCMNAENENQDT--WYLDSGCSNHMTGNQRIFV*LDDSFYSHVKLGDGNMKKI 837 E+ + ++E ++ WYLDSG SNHM G + +F LD+S +V LGD + ++ Sbjct: 314 QEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEV 373 Query: 838 EGKGVSVIYTK 870 +GKG +I K Sbjct: 374 KGKGNILIRLK 384